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The map label for this gene is recO [H]

Identifier: 167623019

GI number: 167623019

Start: 1323718

End: 1324473

Strand: Direct

Name: recO [H]

Synonym: Shal_1085

Alternate gene names: 167623019

Gene position: 1323718-1324473 (Clockwise)

Preceding gene: 167623018

Following gene: 167623020

Centisome position: 25.33

GC content: 42.86

Gene sequence:

>756_bases
ATGGCCAATAGATCTTATGATGTTGATCACTGTTTCAGTTTATTTTGCAATCGGAATGAGATCATCATGGAGCGTGGCTA
CGTTCTTCACAGCAGACATTTTCGTGATTCAAGCGTAATCGTTAACTTACTGGTTGACGGTAAAGGCCGTGTCGATGCAG
TGGCTCGCCTTGGTAGCGCTAAAAATTCGATTCGCAGTATCTTACAGCCTTTTCAGCCGTTGATTTTTCAGTTGCAGGGA
AAATCGGAGCTTAAAACCTTAAAACAAACCGAAGCAGCAAGTCCTGCGGTGCCGTTAACGGGTGATTGTTTATATTCCGG
CCTTTATCTAAATGAACTCCTGATCCGCTGCTTAAGCGGGCAGCATAATGCTGAGAACTTATTTTTTGATTATCATCGCA
CCTTAATAGCCATGGCTACGAAATTTGATCAAAGTCAGCTTAGGTACTTTGAGCATGCTCTCTTAAGAGAGCTAGGCACT
ATGCCATCGTTAGACTTTGACCCTAGCGATGCTCCAATCACCGCCAGTGGCTGTTATCGATTAGAGCAAACGCATGGTTT
CACGCCTGTGATAACGACAGAGTTTAATCGACACAAGTATTTTTCTGGAGAAATGTTAGTAGCGTTAAACCAGCAGACAT
TAACGATGGAACACTATAGTGAAGCCAAAAGATTGATGCGTCAGTTGTTAGCTCCAATACTTGGCGATAAACCACTGCAC
TCGAGAAGCTTGTTTATTAAGCAAACCAAGACTTAA

Upstream 100 bases:

>100_bases
CAAATAGTGCCTCTTTTTAGTGATAAGAAGAGGCATTTTTTTATAGCAAGACAACAGATTAAGGCTCACTCTGTTCGAGT
TGTTTATACCGATTGGTATA

Downstream 100 bases:

>100_bases
TTCCGCGAAGCAAGCTAAGATAAATTCAATAGCGTTCTGCTCCATGTACTGGCTAAACTGCCACCCTATCAGTACAATAT
GCTCTTTCATTTCAGCTGAT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MANRSYDVDHCFSLFCNRNEIIMERGYVLHSRHFRDSSVIVNLLVDGKGRVDAVARLGSAKNSIRSILQPFQPLIFQLQG
KSELKTLKQTEAASPAVPLTGDCLYSGLYLNELLIRCLSGQHNAENLFFDYHRTLIAMATKFDQSQLRYFEHALLRELGT
MPSLDFDPSDAPITASGCYRLEQTHGFTPVITTEFNRHKYFSGEMLVALNQQTLTMEHYSEAKRLMRQLLAPILGDKPLH
SRSLFIKQTKT

Sequences:

>Translated_251_residues
MANRSYDVDHCFSLFCNRNEIIMERGYVLHSRHFRDSSVIVNLLVDGKGRVDAVARLGSAKNSIRSILQPFQPLIFQLQG
KSELKTLKQTEAASPAVPLTGDCLYSGLYLNELLIRCLSGQHNAENLFFDYHRTLIAMATKFDQSQLRYFEHALLRELGT
MPSLDFDPSDAPITASGCYRLEQTHGFTPVITTEFNRHKYFSGEMLVALNQQTLTMEHYSEAKRLMRQLLAPILGDKPLH
SRSLFIKQTKT
>Mature_250_residues
ANRSYDVDHCFSLFCNRNEIIMERGYVLHSRHFRDSSVIVNLLVDGKGRVDAVARLGSAKNSIRSILQPFQPLIFQLQGK
SELKTLKQTEAASPAVPLTGDCLYSGLYLNELLIRCLSGQHNAENLFFDYHRTLIAMATKFDQSQLRYFEHALLRELGTM
PSLDFDPSDAPITASGCYRLEQTHGFTPVITTEFNRHKYFSGEMLVALNQQTLTMEHYSEAKRLMRQLLAPILGDKPLHS
RSLFIKQTKT

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=230, Percent_Identity=38.695652173913, Blast_Score=140, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 28589; Mature: 28458

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRSYDVDHCFSLFCNRNEIIMERGYVLHSRHFRDSSVIVNLLVDGKGRVDAVARLGSA
CCCCCCCHHHHHHHHHCCCCEEHHCCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHCCH
KNSIRSILQPFQPLIFQLQGKSELKTLKQTEAASPAVPLTGDCLYSGLYLNELLIRCLSG
HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
QHNAENLFFDYHRTLIAMATKFDQSQLRYFEHALLRELGTMPSLDFDPSDAPITASGCYR
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHCCEE
LEQTHGFTPVITTEFNRHKYFSGEMLVALNQQTLTMEHYSEAKRLMRQLLAPILGDKPLH
EHHHCCCCCEEEECCCCCEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SRSLFIKQTKT
CCEEEEEECCC
>Mature Secondary Structure 
ANRSYDVDHCFSLFCNRNEIIMERGYVLHSRHFRDSSVIVNLLVDGKGRVDAVARLGSA
CCCCCCHHHHHHHHHCCCCEEHHCCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHCCH
KNSIRSILQPFQPLIFQLQGKSELKTLKQTEAASPAVPLTGDCLYSGLYLNELLIRCLSG
HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
QHNAENLFFDYHRTLIAMATKFDQSQLRYFEHALLRELGTMPSLDFDPSDAPITASGCYR
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHCCEE
LEQTHGFTPVITTEFNRHKYFSGEMLVALNQQTLTMEHYSEAKRLMRQLLAPILGDKPLH
EHHHCCCCCEEEECCCCCEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SRSLFIKQTKT
CCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA