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The map label for this gene is yadS [C]

Identifier: 167622982

GI number: 167622982

Start: 1281367

End: 1281990

Strand: Reverse

Name: yadS [C]

Synonym: Shal_1048

Alternate gene names: 167622982

Gene position: 1281990-1281367 (Counterclockwise)

Preceding gene: 167622983

Following gene: 167622981

Centisome position: 24.53

GC content: 47.92

Gene sequence:

>624_bases
ATGATCGATTGGATCTATTTCTTTGACCTTTGCGGTACGGCGGTATTTGCGCTTTCAGGTGCGCTTGCGGCTGGCAGGCA
TAAGATGGATCCGTTTGGGGTACTCGTGCTTGCCTCGGTAACTGCCATTGGTGGTGGTAGTATTCGTGACGCCCTGCTAG
GCACAACCCCCGTATTTTGGATCCAAGACCATAATTACATCACGGTGATTTTAATTACCGTTATATTGACCTTTATTTTT
GTGCGTAAACCTAAGCGGGTACCACGCTACATCCTGCCCGTTGCGGACGCCCTAGGTTTGGCGCTATTTACCGTGATTGG
CGTAGAAAAAGCGCTGAATTTAGAACTCAGTGGCATGACTGCCGTGGTGATGGGTTTAATTACTGGCGTCGGCGGTGGTA
TTATTCGAGACTTGCTCTGTCAGCAGGTACCTATGGTGCTGCGCACAGAAATTTATGCAACGGCATCGATAATGGGCGGG
ATCTGTTACACCATTAGCCTGCATTTGGGAGCGGCCGATATGTTTGCCTTATTATTTGCAATGAGTACTGCACTCGTGAT
TAGATTAGCCGCTATTCGTTGGCACCTGTCATTACCAGCATTTGATTTAAAGACACCACAATAA

Upstream 100 bases:

>100_bases
GCTGTAGCCTGTTCTTACTACTTTATTCGCTACTGCTTTCAGTTATCGAAATTCGTATTTCGGTCGATGCCCTCAACATC
CATCTAAAAGAGATGGATAG

Downstream 100 bases:

>100_bases
TGAGATTAGCTTTTTTTAGTTTTGTATTTCTACTCTTTAGCTTTCCAGCACTCGCTAATATTGGCGACATGCCCAAAGAG
CAGCAGTTGGCGATCAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MIDWIYFFDLCGTAVFALSGALAAGRHKMDPFGVLVLASVTAIGGGSIRDALLGTTPVFWIQDHNYITVILITVILTFIF
VRKPKRVPRYILPVADALGLALFTVIGVEKALNLELSGMTAVVMGLITGVGGGIIRDLLCQQVPMVLRTEIYATASIMGG
ICYTISLHLGAADMFALLFAMSTALVIRLAAIRWHLSLPAFDLKTPQ

Sequences:

>Translated_207_residues
MIDWIYFFDLCGTAVFALSGALAAGRHKMDPFGVLVLASVTAIGGGSIRDALLGTTPVFWIQDHNYITVILITVILTFIF
VRKPKRVPRYILPVADALGLALFTVIGVEKALNLELSGMTAVVMGLITGVGGGIIRDLLCQQVPMVLRTEIYATASIMGG
ICYTISLHLGAADMFALLFAMSTALVIRLAAIRWHLSLPAFDLKTPQ
>Mature_207_residues
MIDWIYFFDLCGTAVFALSGALAAGRHKMDPFGVLVLASVTAIGGGSIRDALLGTTPVFWIQDHNYITVILITVILTFIF
VRKPKRVPRYILPVADALGLALFTVIGVEKALNLELSGMTAVVMGLITGVGGGIIRDLLCQQVPMVLRTEIYATASIMGG
ICYTISLHLGAADMFALLFAMSTALVIRLAAIRWHLSLPAFDLKTPQ

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=205, Percent_Identity=56.0975609756098, Blast_Score=198, Evalue=2e-52,
Organism=Escherichia coli, GI87082304, Length=159, Percent_Identity=41.5094339622642, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22281; Mature: 22281

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDWIYFFDLCGTAVFALSGALAAGRHKMDPFGVLVLASVTAIGGGSIRDALLGTTPVFW
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE
IQDHNYITVILITVILTFIFVRKPKRVPRYILPVADALGLALFTVIGVEKALNLELSGMT
EECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECHHH
AVVMGLITGVGGGIIRDLLCQQVPMVLRTEIYATASIMGGICYTISLHLGAADMFALLFA
HHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHEEEECCCHHHHHHHHHH
MSTALVIRLAAIRWHLSLPAFDLKTPQ
HHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIDWIYFFDLCGTAVFALSGALAAGRHKMDPFGVLVLASVTAIGGGSIRDALLGTTPVFW
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE
IQDHNYITVILITVILTFIFVRKPKRVPRYILPVADALGLALFTVIGVEKALNLELSGMT
EECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECHHH
AVVMGLITGVGGGIIRDLLCQQVPMVLRTEIYATASIMGGICYTISLHLGAADMFALLFA
HHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHEEEECCCHHHHHHHHHH
MSTALVIRLAAIRWHLSLPAFDLKTPQ
HHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301; 1741267 [H]