Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622958

Identifier: 167622958

GI number: 167622958

Start: 1249809

End: 1250879

Strand: Direct

Name: 167622958

Synonym: Shal_1019

Alternate gene names: NA

Gene position: 1249809-1250879 (Clockwise)

Preceding gene: 167622957

Following gene: 167622963

Centisome position: 23.91

GC content: 47.15

Gene sequence:

>1071_bases
ATGTCGATTTTACTCGATGCAGTGACTCGAGATAAGCAACAATCTCAATCGATTACCCATGATGTGGTGTTAACTCCGAG
GGCGCAATATAAGGCGAAGCAAGGGCGTGGTAAAGGGCTTAAACATGCCGCAATTTTTGTCTCTTTATTGCTGTTGATGA
TTTTATCCGCTTGGCTATTGAGTCAGGCATTGTATCCTGAGTCGGCAGTTAATAATGGATTGGGGGAAACGGCGAGCGTG
AACTCAAAAAGCCACTCGACCTCTAATATACAAGAGCTGGGTAAGCTAGAGTTAGCTAAGCAAGAGTCGACTCAACCAGT
GGGTCACCAAGAGGTCGACTCTGCGTCTACACCGGAGTCTGTGCCCGAGATCCGCCTTGCTGGGAAGGTTGCGCTGCCAA
TCGCTCAGCCTTTAGCGGTTACTCAACTCAAAGGCGTTACCGCTTCTGTGTTGCCGACAAACAATGTTGCAGCAGAGGAG
CCGTCTGGCGATCTGATGGCTGCACTTTTAAAGGCGCAACAGAGTGTAGAGCAAGCGAGTGAATCCGTCTCTAATCAAAG
TATTAATCAAGGTACTGATCAAGCGCCGGATCAGAGTGAGCCGATAATTTTAGGTGCTAATAGTAATCAGCGTGGAGACG
AACTGCTTGAGTCACTCAAGTATCAAGTTGAATATGCCGCTAATGATGTCGGGCTTGAGCGCGCAGAGTCGGCGGCTAAC
AATAATAATTTGTTAGCCGTATTTGAAGCAGCGCTTAAAGATGTTGAGCGTGAAAATTCGGTGGCAACTCCTGTGACGGA
GGAAAAACTGGATCCTATTCCAACTACGCCAAAGTCTGACGCCATCCCTAAGTATGGTCAACTACCCGCTGGTTTACAGC
TACAAGTCCCTGAGTTTAATATCAATGCCCATGTTTACTCGAGCGTGCCTGAGAATCGCTGGTTAAATGTTGATGGTGCT
GAATTGCAAGAGGGCGATAGCATTCAAGGCAAACTGACTATCGTTGAGATAAGACCTAGAGATGTAGTACTTGCGGTGCA
AGGGACTGAATTTAAAGTACCTGCGATTTAA

Upstream 100 bases:

>100_bases
TGATTGCAGATGGGATCGCTGGTACGCAAACCCTTGTGCAGCTTAATCTGTATTTAAGTGATGCAGGGCCGCGACTCGGT
CAAAGCCAGAGGTTGTATTA

Downstream 100 bases:

>100_bases
GCAGATAACACCGTTTTGAAAAAGGCCTAACTAAGTGCTAGGCCTTTTTGCTTTTTATCATCAAATTATCGACTGTAGAG
GCCGCTAACTATATAAATGG

Product: general secretion pathway protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSILLDAVTRDKQQSQSITHDVVLTPRAQYKAKQGRGKGLKHAAIFVSLLLLMILSAWLLSQALYPESAVNNGLGETASV
NSKSHSTSNIQELGKLELAKQESTQPVGHQEVDSASTPESVPEIRLAGKVALPIAQPLAVTQLKGVTASVLPTNNVAAEE
PSGDLMAALLKAQQSVEQASESVSNQSINQGTDQAPDQSEPIILGANSNQRGDELLESLKYQVEYAANDVGLERAESAAN
NNNLLAVFEAALKDVERENSVATPVTEEKLDPIPTTPKSDAIPKYGQLPAGLQLQVPEFNINAHVYSSVPENRWLNVDGA
ELQEGDSIQGKLTIVEIRPRDVVLAVQGTEFKVPAI

Sequences:

>Translated_356_residues
MSILLDAVTRDKQQSQSITHDVVLTPRAQYKAKQGRGKGLKHAAIFVSLLLLMILSAWLLSQALYPESAVNNGLGETASV
NSKSHSTSNIQELGKLELAKQESTQPVGHQEVDSASTPESVPEIRLAGKVALPIAQPLAVTQLKGVTASVLPTNNVAAEE
PSGDLMAALLKAQQSVEQASESVSNQSINQGTDQAPDQSEPIILGANSNQRGDELLESLKYQVEYAANDVGLERAESAAN
NNNLLAVFEAALKDVERENSVATPVTEEKLDPIPTTPKSDAIPKYGQLPAGLQLQVPEFNINAHVYSSVPENRWLNVDGA
ELQEGDSIQGKLTIVEIRPRDVVLAVQGTEFKVPAI
>Mature_355_residues
SILLDAVTRDKQQSQSITHDVVLTPRAQYKAKQGRGKGLKHAAIFVSLLLLMILSAWLLSQALYPESAVNNGLGETASVN
SKSHSTSNIQELGKLELAKQESTQPVGHQEVDSASTPESVPEIRLAGKVALPIAQPLAVTQLKGVTASVLPTNNVAAEEP
SGDLMAALLKAQQSVEQASESVSNQSINQGTDQAPDQSEPIILGANSNQRGDELLESLKYQVEYAANDVGLERAESAANN
NNLLAVFEAALKDVERENSVATPVTEEKLDPIPTTPKSDAIPKYGQLPAGLQLQVPEFNINAHVYSSVPENRWLNVDGAE
LQEGDSIQGKLTIVEIRPRDVVLAVQGTEFKVPAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38100; Mature: 37969

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILLDAVTRDKQQSQSITHDVVLTPRAQYKAKQGRGKGLKHAAIFVSLLLLMILSAWLL
CCEEHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SQALYPESAVNNGLGETASVNSKSHSTSNIQELGKLELAKQESTQPVGHQEVDSASTPES
HHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC
VPEIRLAGKVALPIAQPLAVTQLKGVTASVLPTNNVAAEEPSGDLMAALLKAQQSVEQAS
CCCEEECCEEECCCCCCHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ESVSNQSINQGTDQAPDQSEPIILGANSNQRGDELLESLKYQVEYAANDVGLERAESAAN
HHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC
NNNLLAVFEAALKDVERENSVATPVTEEKLDPIPTTPKSDAIPKYGQLPAGLQLQVPEFN
CCCEEEHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
INAHVYSSVPENRWLNVDGAELQEGDSIQGKLTIVEIRPRDVVLAVQGTEFKVPAI
CCEEEECCCCCCCEECCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCEEECCCC
>Mature Secondary Structure 
SILLDAVTRDKQQSQSITHDVVLTPRAQYKAKQGRGKGLKHAAIFVSLLLLMILSAWLL
CEEHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SQALYPESAVNNGLGETASVNSKSHSTSNIQELGKLELAKQESTQPVGHQEVDSASTPES
HHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC
VPEIRLAGKVALPIAQPLAVTQLKGVTASVLPTNNVAAEEPSGDLMAALLKAQQSVEQAS
CCCEEECCEEECCCCCCHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ESVSNQSINQGTDQAPDQSEPIILGANSNQRGDELLESLKYQVEYAANDVGLERAESAAN
HHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC
NNNLLAVFEAALKDVERENSVATPVTEEKLDPIPTTPKSDAIPKYGQLPAGLQLQVPEFN
CCCEEEHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
INAHVYSSVPENRWLNVDGAELQEGDSIQGKLTIVEIRPRDVVLAVQGTEFKVPAI
CCEEEECCCCCCCEECCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA