| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is folB [H]
Identifier: 167622950
GI number: 167622950
Start: 1242344
End: 1242697
Strand: Direct
Name: folB [H]
Synonym: Shal_1011
Alternate gene names: 167622950
Gene position: 1242344-1242697 (Clockwise)
Preceding gene: 167622947
Following gene: 167622951
Centisome position: 23.77
GC content: 45.76
Gene sequence:
>354_bases ATGGATAAAGTACTGATTAGAGAACTTAGAATTGAAACCGTCATCGGGATCTATGAGTGGGAAAAGCAGATCCACCAGAG CTTGCTTATCGATCTAGACATGGCTTGGGATAACCGCTTAGCGGCGGCAAGTGATGATTATCAACATGCACTTTGCTATG AGACCGTGTCTAACCGCTTGACTGCTTTGATCACTGAAAAGCCGATAGAGCTGATTGAAACCGTGGCTGAAATGATTGCG ACCTGCGTGATGAGTGAATTCAATGTGCCATGGGTAAAAGTTAAGGTGATGAAACCCGGCGCTGTACCTACAGCGTCTGC AGTGGGTGTTGAGATTGAAAGAGGTTATGCATAG
Upstream 100 bases:
>100_bases AGCGTTAGCGTAATATTTCAGCTTTGTGGCGGATTATATCCCTTTTGTTCGTTTTAGCTTATCTGACCTCAGAGTCATGG ATTAAAGTTTTGGAGAAATC
Downstream 100 bases:
>100_bases ATGGCGAAGATTTTTATAAGCCTTGGCAGTAATATTGAACCAGAACGTTACCTTAAGGCCGCGCTAACTGATCTTGATTA CTATTTTGAAACTCTCGAAC
Product: dihydroneopterin aldolase
Products: NA
Alternate protein names: DHNA [H]
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MDKVLIRELRIETVIGIYEWEKQIHQSLLIDLDMAWDNRLAAASDDYQHALCYETVSNRLTALITEKPIELIETVAEMIA TCVMSEFNVPWVKVKVMKPGAVPTASAVGVEIERGYA
Sequences:
>Translated_117_residues MDKVLIRELRIETVIGIYEWEKQIHQSLLIDLDMAWDNRLAAASDDYQHALCYETVSNRLTALITEKPIELIETVAEMIA TCVMSEFNVPWVKVKVMKPGAVPTASAVGVEIERGYA >Mature_117_residues MDKVLIRELRIETVIGIYEWEKQIHQSLLIDLDMAWDNRLAAASDDYQHALCYETVSNRLTALITEKPIELIETVAEMIA TCVMSEFNVPWVKVKVMKPGAVPTASAVGVEIERGYA
Specific function: Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. Can use L-threo-dihydroneopterin and D-erythro-dihydroneopterin as substrates for the formation of 6-hydroxymethyldihydropterin, but it can also catalyze the epimeriza
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHNA family [H]
Homologues:
Organism=Escherichia coli, GI87082204, Length=115, Percent_Identity=46.0869565217391, Blast_Score=112, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 [H]
Pfam domain/function: PF02152 FolB [H]
EC number: =4.1.2.25 [H]
Molecular weight: Translated: 13208; Mature: 13208
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKVLIRELRIETVIGIYEWEKQIHQSLLIDLDMAWDNRLAAASDDYQHALCYETVSNRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHH TALITEKPIELIETVAEMIATCVMSEFNVPWVKVKVMKPGAVPTASAVGVEIERGYA HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEECCCC >Mature Secondary Structure MDKVLIRELRIETVIGIYEWEKQIHQSLLIDLDMAWDNRLAAASDDYQHALCYETVSNRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHH TALITEKPIELIETVAEMIATCVMSEFNVPWVKVKVMKPGAVPTASAVGVEIERGYA HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]