| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is plsY
Identifier: 167622949
GI number: 167622949
Start: 1241434
End: 1242033
Strand: Reverse
Name: plsY
Synonym: Shal_1010
Alternate gene names: 167622949
Gene position: 1242033-1241434 (Counterclockwise)
Preceding gene: 167622955
Following gene: 167622948
Centisome position: 23.76
GC content: 48.0
Gene sequence:
>600_bases TTGACTCTAACAGTACTCACCATAGTCATAATCGTGGGCGCCTATTTGGCGGGCTCAGTATCGAGTGCAGTTTTAGTATG TAAAATTCGTGGTCTTCCCGACCCTCGAACCCAAGGCTCGGGCAATCCAGGCGCGACTAATGTACTGCGTATCGGCGGAG CCAGTTCAGCGGCTCTAGTGCTATTTTGTGACATGCTAAAAGGCGCGGCGCCAGCTTATCTAGCTTTTAGACTCGGAGTC GATCCGATTGCACTGGGTGTTATTGCCATTGCCGCCTGTCTTGGTCATATATTTCCCATTTTCTTTGGCTTCAAAGGCGG TAAAGGTGTCGCAACAGCATTCGGCGCTATGGCTCCTATCGGTCATGACTTAGCACTTTGCCTCCTGGCATCTTGGATAG TTCTTGTTCTAGTCACCCGTTACTCATCGTTCGCCGCAATTTGTACAGCATTGCTTGCTCCGGTTTACACTTGGTGGCTT GATGACAGGTTTACCATTCCGGTTGCCATGCTTTCAACTTTGATAGTGATTCGCCATAAAGACAACATTAAGCGCCTACT TAAAGGTGAAGAGTCTAAGGTTTCACGAAAAAAAACATAG
Upstream 100 bases:
>100_bases ATGCACTCGTTATGTGTTTAATTCATCTACAACTAACAAAACACACAAGCACATTTTTTATGTGGCGCGATGATACCCTA AGACGGATAAGGAAACCAAT
Downstream 100 bases:
>100_bases CGACACTCGCACAAAAAACCGTTAAAGATTAATTAACTAGCAATGTTTAATCTCATTAGCTTATAGCGCTTAAATATCCC CTATTGTTCGTCCCCTTAGC
Product: putative glycerol-3-phosphate acyltransferase PlsY
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTLTVLTIVIIVGAYLAGSVSSAVLVCKIRGLPDPRTQGSGNPGATNVLRIGGASSAALVLFCDMLKGAAPAYLAFRLGV DPIALGVIAIAACLGHIFPIFFGFKGGKGVATAFGAMAPIGHDLALCLLASWIVLVLVTRYSSFAAICTALLAPVYTWWL DDRFTIPVAMLSTLIVIRHKDNIKRLLKGEESKVSRKKT
Sequences:
>Translated_199_residues MTLTVLTIVIIVGAYLAGSVSSAVLVCKIRGLPDPRTQGSGNPGATNVLRIGGASSAALVLFCDMLKGAAPAYLAFRLGV DPIALGVIAIAACLGHIFPIFFGFKGGKGVATAFGAMAPIGHDLALCLLASWIVLVLVTRYSSFAAICTALLAPVYTWWL DDRFTIPVAMLSTLIVIRHKDNIKRLLKGEESKVSRKKT >Mature_198_residues TLTVLTIVIIVGAYLAGSVSSAVLVCKIRGLPDPRTQGSGNPGATNVLRIGGASSAALVLFCDMLKGAAPAYLAFRLGVD PIALGVIAIAACLGHIFPIFFGFKGGKGVATAFGAMAPIGHDLALCLLASWIVLVLVTRYSSFAAICTALLAPVYTWWLD DRFTIPVAMLSTLIVIRHKDNIKRLLKGEESKVSRKKT
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family
Homologues:
Organism=Escherichia coli, GI1789439, Length=188, Percent_Identity=61.7021276595745, Blast_Score=240, Evalue=4e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSY_SHEHH (B0TIN9)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001673243.1 - GeneID: 5905168 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_1010 - HOGENOM: HBG734487 - OMA: SRIGEKK - ProtClustDB: PRK00220 - BioCyc: SHAL458817:SHAL_1010-MONOMER - HAMAP: MF_01043 - InterPro: IPR003811 - TIGRFAMs: TIGR00023
Pfam domain/function: PF02660 DUF205
EC number: NA
Molecular weight: Translated: 20942; Mature: 20811
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x91f9ed4)-; HASH(0x20097fd8)-; HASH(0x1fbe0450)-; HASH(0x1fd7c6e8)-; HASH(0x1f4a2b10)-;
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTVLTIVIIVGAYLAGSVSSAVLVCKIRGLPDPRTQGSGNPGATNVLRIGGASSAALV CHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHH LFCDMLKGAAPAYLAFRLGVDPIALGVIAIAACLGHIFPIFFGFKGGKGVATAFGAMAPI HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC GHDLALCLLASWIVLVLVTRYSSFAAICTALLAPVYTWWLDDRFTIPVAMLSTLIVIRHK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCH DNIKRLLKGEESKVSRKKT HHHHHHHCCCHHHHHCCCH >Mature Secondary Structure TLTVLTIVIIVGAYLAGSVSSAVLVCKIRGLPDPRTQGSGNPGATNVLRIGGASSAALV HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHH LFCDMLKGAAPAYLAFRLGVDPIALGVIAIAACLGHIFPIFFGFKGGKGVATAFGAMAPI HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC GHDLALCLLASWIVLVLVTRYSSFAAICTALLAPVYTWWLDDRFTIPVAMLSTLIVIRHK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCH DNIKRLLKGEESKVSRKKT HHHHHHHCCCHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA