Click here to switch to the map view.

The map label for this gene is 167622910

Identifier: 167622910

GI number: 167622910

Start: 1193247

End: 1193885

Strand: Reverse

Name: 167622910

Synonym: Shal_0970

Alternate gene names: NA

Gene position: 1193885-1193247 (Counterclockwise)

Preceding gene: 167622911

Following gene: 167622908

Centisome position: 22.84

GC content: 45.54

Gene sequence:

>639_bases
ATGCCAGATACCACCTATAACCAAGCTGTTTTAGAGTTCGCGATTGCGGGCCTAGAAGCGCTTTCACAAGCAAGTGCTAA
GAGTAGCAGCGTCAGAACACCTACAGCCGAGAGTCACTTCCTTTGCAGCTGGATGGTAACCGCGTTAAAACAACGCACGT
TTTCAAAATTAGTCGCCGACGACCTAACGCTGTGGGTCCGTCAAGGTCGCAGCATGGGGGCTGGTGCCGAACTAAAAACA
CTGCTAGAAAAAATTAAGGCTCAATATAGCTTTATCGCCGATAAGCAAACCGGCCTAGGCCTGTCTCTCAAATCAATGTT
AGCGGAGCTTGAGAGCCAAGATTGGATTGTCATCACAGATGAAGAAGTGACTAAGAAGCTAAAGCTTGATAGCGATGGCT
GTAATAGCTTAGTCATTTCAGATGAACAGTTTAGTCAGCGCATTGATGGTGATGAGATTATCAAACCTATCACCCTTTAC
GTTCGTGCCGATGAGATTGAGTTCGCTAAGCTTGCTTATCGCCACAACTTACTGTTAAGCCCTGGTAATAAGAAGAGCTC
TTTGATTAAGCACCATAAAGCCTATCAAGTTTGGCCAAAGAACCTTCAGCCTGCACTCACGATACTGCAAACACTTTAA

Upstream 100 bases:

>100_bases
CGCGTTTTATATCGGAAACACAAGTTAATTTATACTTACAGCCCCATTAGGTATAATCCGTTTGCCGTCTCCTTTATTAC
TTCAACACGGCGGAGAGTCC

Downstream 100 bases:

>100_bases
GCCCTATCAGTATCAAGATCAAAATATGCAAACACACATTTAGAACTGACTATAGCTTAAACATAAAAAAGGCCTGCATC
AGCAGGCCTTTTGCTACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MPDTTYNQAVLEFAIAGLEALSQASAKSSSVRTPTAESHFLCSWMVTALKQRTFSKLVADDLTLWVRQGRSMGAGAELKT
LLEKIKAQYSFIADKQTGLGLSLKSMLAELESQDWIVITDEEVTKKLKLDSDGCNSLVISDEQFSQRIDGDEIIKPITLY
VRADEIEFAKLAYRHNLLLSPGNKKSSLIKHHKAYQVWPKNLQPALTILQTL

Sequences:

>Translated_212_residues
MPDTTYNQAVLEFAIAGLEALSQASAKSSSVRTPTAESHFLCSWMVTALKQRTFSKLVADDLTLWVRQGRSMGAGAELKT
LLEKIKAQYSFIADKQTGLGLSLKSMLAELESQDWIVITDEEVTKKLKLDSDGCNSLVISDEQFSQRIDGDEIIKPITLY
VRADEIEFAKLAYRHNLLLSPGNKKSSLIKHHKAYQVWPKNLQPALTILQTL
>Mature_211_residues
PDTTYNQAVLEFAIAGLEALSQASAKSSSVRTPTAESHFLCSWMVTALKQRTFSKLVADDLTLWVRQGRSMGAGAELKTL
LEKIKAQYSFIADKQTGLGLSLKSMLAELESQDWIVITDEEVTKKLKLDSDGCNSLVISDEQFSQRIDGDEIIKPITLYV
RADEIEFAKLAYRHNLLLSPGNKKSSLIKHHKAYQVWPKNLQPALTILQTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23657; Mature: 23526

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTTYNQAVLEFAIAGLEALSQASAKSSSVRTPTAESHFLCSWMVTALKQRTFSKLVAD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DLTLWVRQGRSMGAGAELKTLLEKIKAQYSFIADKQTGLGLSLKSMLAELESQDWIVITD
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEC
EEVTKKLKLDSDGCNSLVISDEQFSQRIDGDEIIKPITLYVRADEIEFAKLAYRHNLLLS
HHHHHHHCCCCCCCCEEEECHHHHHHHCCHHHHHHHEEEEEEECCHHHHHHHHHHCEEEC
PGNKKSSLIKHHKAYQVWPKNLQPALTILQTL
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
PDTTYNQAVLEFAIAGLEALSQASAKSSSVRTPTAESHFLCSWMVTALKQRTFSKLVAD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DLTLWVRQGRSMGAGAELKTLLEKIKAQYSFIADKQTGLGLSLKSMLAELESQDWIVITD
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEC
EEVTKKLKLDSDGCNSLVISDEQFSQRIDGDEIIKPITLYVRADEIEFAKLAYRHNLLLS
HHHHHHHCCCCCCCCEEEECHHHHHHHCCHHHHHHHEEEEEEECCHHHHHHHHHHCEEEC
PGNKKSSLIKHHKAYQVWPKNLQPALTILQTL
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA