| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622907
Identifier: 167622907
GI number: 167622907
Start: 1188768
End: 1189247
Strand: Reverse
Name: 167622907
Synonym: Shal_0967
Alternate gene names: NA
Gene position: 1189247-1188768 (Counterclockwise)
Preceding gene: 167622908
Following gene: 167622906
Centisome position: 22.75
GC content: 47.5
Gene sequence:
>480_bases ATGCAATTACGCACTATCGGGCCATCTGATTGGCCACACATTTTGCAAATCCAACTCGAGTGCTATCCACAGATAGAACC CGAGTCACTTGAAGTGCTGCAGAGTAAATGGCAAGCCTCACCTCAAAGCTGTTTTGTACTTGAGTCGCAAGATGACGTGA TAGGTTATTGCCTTGCTCACCCCTGGGTTCAAGATAGCCCGCCGTCTCTCGAGCAAATGCTGGCTAAGGTAGATAAGCCT AATACTCTCTACTTACATGATATCGCTCTGTCTTCAAAGGCGCAGGGGAAAGGAGCTGGCCGCGCAGCATTAGCGATCTT GATTGAGTTTGCCCGCTGTCATCATTACCCCAATATCTCTCTAGTGGCAGTGCAAGGGGCACACCATTATTGGGCTAAGC AAGGCTTTAAAGCGAAAAGCATAAACAAGGACCTTTCATGTTACCCAGAGGACGCTTGCTATATGGTTTATACCTTATAG
Upstream 100 bases:
>100_bases ACACCTAGAAACCCGTTACTTGTCGCGCTAGAGTATCAATATTCCCATTAGCAGCTCTCTGTTAATGGGAATAATAAGCG CCCCTATTTAGGATCTTTTT
Downstream 100 bases:
>100_bases CCAAGATTTGCTATCATAGAGGCAATTTCATTAGAGAAGCTAAAAATGGCAACCAGAATTACCTATAAATTTAAGAACCA AGCAAAAGAGATTAACTTTG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; GCN5-Like N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase GNAT Family Protein; Ornithine Decarboxylase; N-Acetyltransferase GCN5-Related
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MQLRTIGPSDWPHILQIQLECYPQIEPESLEVLQSKWQASPQSCFVLESQDDVIGYCLAHPWVQDSPPSLEQMLAKVDKP NTLYLHDIALSSKAQGKGAGRAALAILIEFARCHHYPNISLVAVQGAHHYWAKQGFKAKSINKDLSCYPEDACYMVYTL
Sequences:
>Translated_159_residues MQLRTIGPSDWPHILQIQLECYPQIEPESLEVLQSKWQASPQSCFVLESQDDVIGYCLAHPWVQDSPPSLEQMLAKVDKP NTLYLHDIALSSKAQGKGAGRAALAILIEFARCHHYPNISLVAVQGAHHYWAKQGFKAKSINKDLSCYPEDACYMVYTL >Mature_159_residues MQLRTIGPSDWPHILQIQLECYPQIEPESLEVLQSKWQASPQSCFVLESQDDVIGYCLAHPWVQDSPPSLEQMLAKVDKP NTLYLHDIALSSKAQGKGAGRAALAILIEFARCHHYPNISLVAVQGAHHYWAKQGFKAKSINKDLSCYPEDACYMVYTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17884; Mature: 17884
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRTIGPSDWPHILQIQLECYPQIEPESLEVLQSKWQASPQSCFVLESQDDVIGYCLAH CCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEHEECC PWVQDSPPSLEQMLAKVDKPNTLYLHDIALSSKAQGKGAGRAALAILIEFARCHHYPNIS CCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEE LVAVQGAHHYWAKQGFKAKSINKDLSCYPEDACYMVYTL EEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure MQLRTIGPSDWPHILQIQLECYPQIEPESLEVLQSKWQASPQSCFVLESQDDVIGYCLAH CCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEHEECC PWVQDSPPSLEQMLAKVDKPNTLYLHDIALSSKAQGKGAGRAALAILIEFARCHHYPNIS CCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEE LVAVQGAHHYWAKQGFKAKSINKDLSCYPEDACYMVYTL EEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA