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The map label for this gene is 167622905

Identifier: 167622905

GI number: 167622905

Start: 1187886

End: 1188410

Strand: Reverse

Name: 167622905

Synonym: Shal_0965

Alternate gene names: NA

Gene position: 1188410-1187886 (Counterclockwise)

Preceding gene: 167622906

Following gene: 167622902

Centisome position: 22.74

GC content: 45.9

Gene sequence:

>525_bases
ATGACGACTTCTTATATGCCCAATAACGAACACGCTAACTTCCCACGCGCAAGCTTTATTAAGCGCTGTGGTGCAGGTGT
TTATGACCTTCTTCTCGCTGTTGCCGTTTATATGGTTGCGGGCGCGATTGGCTTCGGTATCTTTACTGGATTGACTGCAA
GTGGTCTAATCGATATGGCCGGATTTGAGCATGTCTCAGATCTGCTCAATGGTACTGCGCTATATAAAGGCATTTATCAG
TTTTGGATTGTGCTGTGTGTGGGTCTGTTTTATATCAGTTTTTGGAGCAAGGGGGGGCAAACATTAGGTATGCGAGCTTG
GCGACTTAAGATCCAGCATCCTAATGGGCAAAACCTCAGCATGGTGACTGCAGCAGCTAGACTTATTTGGTCACTGCTTG
GAATTGGTAATTTATGGATCCTTATCAATGGCGATAAGCTTGCGCTGCAGGATATGATGACCCGCTCAGAAGTCGTCGAG
TTGTCTAAAGAAGCTAATCAGATGCGTAACTGGCACGGTGTTTAA

Upstream 100 bases:

>100_bases
TAGCGACATCTACTACCATAAAGATGAACCGAAAAAGTCATAACGTTTAAGCCGATAACTGTTTATCACCATCCAATAAA
CCTAATAAAAAGTGATATTG

Downstream 100 bases:

>100_bases
CCTACAAGCCAGCGCCTCTAGTAAGACTTCTAGCTTAGCGGCTTAATGCGACAAAAAAGCCAATCGACAGTAATCTGTTG
ATTGGCTTTTTTAATGACCG

Product: RDD domain-containing protein

Products: NA

Alternate protein names: Proline-Rich Antigen; RDD Domain Containing Protein

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTTSYMPNNEHANFPRASFIKRCGAGVYDLLLAVAVYMVAGAIGFGIFTGLTASGLIDMAGFEHVSDLLNGTALYKGIYQ
FWIVLCVGLFYISFWSKGGQTLGMRAWRLKIQHPNGQNLSMVTAAARLIWSLLGIGNLWILINGDKLALQDMMTRSEVVE
LSKEANQMRNWHGV

Sequences:

>Translated_174_residues
MTTSYMPNNEHANFPRASFIKRCGAGVYDLLLAVAVYMVAGAIGFGIFTGLTASGLIDMAGFEHVSDLLNGTALYKGIYQ
FWIVLCVGLFYISFWSKGGQTLGMRAWRLKIQHPNGQNLSMVTAAARLIWSLLGIGNLWILINGDKLALQDMMTRSEVVE
LSKEANQMRNWHGV
>Mature_173_residues
TTSYMPNNEHANFPRASFIKRCGAGVYDLLLAVAVYMVAGAIGFGIFTGLTASGLIDMAGFEHVSDLLNGTALYKGIYQF
WIVLCVGLFYISFWSKGGQTLGMRAWRLKIQHPNGQNLSMVTAAARLIWSLLGIGNLWILINGDKLALQDMMTRSEVVEL
SKEANQMRNWHGV

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19238; Mature: 19107

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSYMPNNEHANFPRASFIKRCGAGVYDLLLAVAVYMVAGAIGFGIFTGLTASGLIDMA
CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFEHVSDLLNGTALYKGIYQFWIVLCVGLFYISFWSKGGQTLGMRAWRLKIQHPNGQNLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHH
MVTAAARLIWSLLGIGNLWILINGDKLALQDMMTRSEVVELSKEANQMRNWHGV
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTSYMPNNEHANFPRASFIKRCGAGVYDLLLAVAVYMVAGAIGFGIFTGLTASGLIDMA
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFEHVSDLLNGTALYKGIYQFWIVLCVGLFYISFWSKGGQTLGMRAWRLKIQHPNGQNLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHH
MVTAAARLIWSLLGIGNLWILINGDKLALQDMMTRSEVVELSKEANQMRNWHGV
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA