Click here to switch to the map view.

The map label for this gene is 167622899

Identifier: 167622899

GI number: 167622899

Start: 1180846

End: 1181382

Strand: Reverse

Name: 167622899

Synonym: Shal_0959

Alternate gene names: NA

Gene position: 1181382-1180846 (Counterclockwise)

Preceding gene: 167622900

Following gene: 167622898

Centisome position: 22.6

GC content: 44.13

Gene sequence:

>537_bases
ATGGATATGCAGCAGAAACTTCAGCAGTTATTAGATAAGCAAGAGATGACAGAGCTGATGTATAAGTTCGCTCGCGCACT
GGACCGAGTCGATGGCGAACTGATGAAGTCAACCTACTGGGAAGATGCGATTGAAGAGCATCAAGATCCAATCTTCCCGG
ATCTGTTCTTTTATAATGATAATGCTCATCAATTTGTTGAGCCTGCTATGGAAGGCTTTAGAGCCCTAAAAACAACCCAG
CACAGAATTAGCAATCCCTTGATAGAAGTTAATGGAGATGTTGCTACCGCTGAAGCTTACGTATGGGCATACCATGTACA
TGAGGAAAATGGGGTTGATAAAGAGGGAATTTTAGGCGGCCGCCACCATTTTCGCTTCGAACGTCGAGACGGTATCTGGA
AGATTAAACATCGCTCTACCGTGTTTGACTGGAACCAAAACCAGAACGCGACAGCAATTTGGGCCGAAAACTTCAGCGAT
AAATATCGTGGCAAACGCAATCATCAAGATGACAGCTACAATTACCTCTCAATCTAA

Upstream 100 bases:

>100_bases
TCATCGCTTTGAAAGCTCACATAACGATTTAACCGTTAACACAACAATCTTGAGCTAAGCCAAATTTCAGTACATCAAAG
ATAATATGAGGATTGATACC

Downstream 100 bases:

>100_bases
CCTTTTTGACTGAAGTAAGTGATGAAGGTCGTCATCGGCCTTCGTCCTTCATTAACAGATAAGTACACATTAGCGGCTAT
CCGCCTAATTAAGGATAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPDLFFYNDNAHQFVEPAMEGFRALKTTQ
HRISNPLIEVNGDVATAEAYVWAYHVHEENGVDKEGILGGRHHFRFERRDGIWKIKHRSTVFDWNQNQNATAIWAENFSD
KYRGKRNHQDDSYNYLSI

Sequences:

>Translated_178_residues
MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPDLFFYNDNAHQFVEPAMEGFRALKTTQ
HRISNPLIEVNGDVATAEAYVWAYHVHEENGVDKEGILGGRHHFRFERRDGIWKIKHRSTVFDWNQNQNATAIWAENFSD
KYRGKRNHQDDSYNYLSI
>Mature_178_residues
MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPDLFFYNDNAHQFVEPAMEGFRALKTTQ
HRISNPLIEVNGDVATAEAYVWAYHVHEENGVDKEGILGGRHHFRFERRDGIWKIKHRSTVFDWNQNQNATAIWAENFSD
KYRGKRNHQDDSYNYLSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21188; Mature: 21188

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPDLFFYND
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
NAHQFVEPAMEGFRALKTTQHRISNPLIEVNGDVATAEAYVWAYHVHEENGVDKEGILGG
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEHEEEEEEEEEECCCCCCHHCCCCC
RHHFRFERRDGIWKIKHRSTVFDWNQNQNATAIWAENFSDKYRGKRNHQDDSYNYLSI
HHHEEEECCCCEEEEECCCEEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCEECCC
>Mature Secondary Structure
MDMQQKLQQLLDKQEMTELMYKFARALDRVDGELMKSTYWEDAIEEHQDPIFPDLFFYND
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
NAHQFVEPAMEGFRALKTTQHRISNPLIEVNGDVATAEAYVWAYHVHEENGVDKEGILGG
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEHEEEEEEEEEECCCCCCHHCCCCC
RHHFRFERRDGIWKIKHRSTVFDWNQNQNATAIWAENFSDKYRGKRNHQDDSYNYLSI
HHHEEEECCCCEEEEECCCEEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]