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The map label for this gene is 167622819

Identifier: 167622819

GI number: 167622819

Start: 1097532

End: 1098899

Strand: Reverse

Name: 167622819

Synonym: Shal_0879

Alternate gene names: NA

Gene position: 1098899-1097532 (Counterclockwise)

Preceding gene: 167622820

Following gene: 167622818

Centisome position: 21.02

GC content: 48.32

Gene sequence:

>1368_bases
ATGAGACGTTTACTACTGCTGGCTACAATAATGCTCAGCCTTAGTGGCTGCGCGTTTAACAGTATTTTTATTAATTACCC
CTCTCAAATGGCCCCAGTTAAAGCTCAGCTCAATTCGCCCACGCCACAAAACGCAGCCAAGATAGTCGAGGAAAAGATCA
ATGGCGCTGATGGGCTACTCTACGCCCAAGAAGCGGGAAGAAGTGCGCAAATAGCCGGTAACTTCGATGCCAGCAAAAAA
TACTATCAGCAAGCAGTTTCAGCCTATTTAGCGTTCGATGATAAAGCCAAACTCAGCCTCAGCGATGCAGGAGCGACAGC
AAGCAGCCTATTTATCAACGATAATGTCATTCCCTATCGAGGCCCCGGTTACGAGCGTATCATGCTGCACCAGTATCAGG
CGCTAAACTACCTGTTTGCAGGCGACCCGCAAGGCGCACTAGTGGAAGTACGTCGCAGTAATGAGCTGCAAAGCCAAGAG
CAAGAGCGCTACCACAAGTCTAACAAGTCAGTGCAAGCCATGGCCAACGGCACCATAGACGCCGAAATGAATAAACTCAG
CAAGGCTGCGGGCACAACCACCAGCTCCTTCTTAAATGCCTATAGCTATTACACCACAGGCATGTTGCACGAGATCTTAG
GCGAGCCCAATGATGCCTTTATCGACTATCGAAAAGCAGCGCAGATCACCCCAAATAACCCTTACCTGCAAAAAGACTTA
GTCAGACTCGCCAAGCAACTCTCTATGCCACAGTATGACGAATTTAAGAAACGCTGGGGCGATGCGGTTATGCCAAATAA
AGGTGATGGCCAAGTCATCATCATGTTAGAGCGCGGCTTCGTTCTAGAGAAACAAAGCTTTACCGTTCCCTTTACGATTC
ACGGCAATTGGCAGACGGCCTCGTTAGCCACCTATTATCCCAATAGACAGCCAGTGAGACAGGGACAGGTGCAAGGGTTA
GGCACTGTGCTAAAAACGGCGCCTATTGCCAATATCGATGCCTTAGCCATCACAGCCCTAAAGGAGGAACTACCAGCCGC
CCTTGTGAGACAGGCTGCTCGGATCTATGCCAAGTCTGAAATGGCTCAGAGCGTCGAGAGTCAAACTAAGAAACGCAATA
ATGATATCGATTACGCCTCTATCGCCATGCAGATATTTAACGTGGTTTCTGAGCAGGCAGATAGACGCAGCTGGTTAACC
CTACCTGAGCAAGCCCAAATTGCACGTTCATACGTGAAAGCTGGTAGCTACTCACTAATGCTGGACAACGATCCAGCCGA
TCCCATTGAAGTTAAGAGTGGACGTACAACCTTAGTCTGGATAATTGACACTGGTAATTACACCCGTTTTTATTCAATAA
TCATTTAG

Upstream 100 bases:

>100_bases
GAATAATAAAGATAAGCCAAACTGCTTTAAACAATTCAGCCTAACTCTGTTAGCAATCAAGGAAGGCGATGCCACTAACG
CAAATTAAAGAGATCCGGGA

Downstream 100 bases:

>100_bases
CAATCACTTGTATGGAACTTACTATGAAACATCTAAAAGTCATTTTTATTCTTACAGCGGTAATAGGTTTATCAGCCTGC
CAATCTAAAGTTGAATACGG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Lipoprotein; TPR Domain-Containing Protein; Adenine DNA Methylase; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MRRLLLLATIMLSLSGCAFNSIFINYPSQMAPVKAQLNSPTPQNAAKIVEEKINGADGLLYAQEAGRSAQIAGNFDASKK
YYQQAVSAYLAFDDKAKLSLSDAGATASSLFINDNVIPYRGPGYERIMLHQYQALNYLFAGDPQGALVEVRRSNELQSQE
QERYHKSNKSVQAMANGTIDAEMNKLSKAAGTTTSSFLNAYSYYTTGMLHEILGEPNDAFIDYRKAAQITPNNPYLQKDL
VRLAKQLSMPQYDEFKKRWGDAVMPNKGDGQVIIMLERGFVLEKQSFTVPFTIHGNWQTASLATYYPNRQPVRQGQVQGL
GTVLKTAPIANIDALAITALKEELPAALVRQAARIYAKSEMAQSVESQTKKRNNDIDYASIAMQIFNVVSEQADRRSWLT
LPEQAQIARSYVKAGSYSLMLDNDPADPIEVKSGRTTLVWIIDTGNYTRFYSIII

Sequences:

>Translated_455_residues
MRRLLLLATIMLSLSGCAFNSIFINYPSQMAPVKAQLNSPTPQNAAKIVEEKINGADGLLYAQEAGRSAQIAGNFDASKK
YYQQAVSAYLAFDDKAKLSLSDAGATASSLFINDNVIPYRGPGYERIMLHQYQALNYLFAGDPQGALVEVRRSNELQSQE
QERYHKSNKSVQAMANGTIDAEMNKLSKAAGTTTSSFLNAYSYYTTGMLHEILGEPNDAFIDYRKAAQITPNNPYLQKDL
VRLAKQLSMPQYDEFKKRWGDAVMPNKGDGQVIIMLERGFVLEKQSFTVPFTIHGNWQTASLATYYPNRQPVRQGQVQGL
GTVLKTAPIANIDALAITALKEELPAALVRQAARIYAKSEMAQSVESQTKKRNNDIDYASIAMQIFNVVSEQADRRSWLT
LPEQAQIARSYVKAGSYSLMLDNDPADPIEVKSGRTTLVWIIDTGNYTRFYSIII
>Mature_455_residues
MRRLLLLATIMLSLSGCAFNSIFINYPSQMAPVKAQLNSPTPQNAAKIVEEKINGADGLLYAQEAGRSAQIAGNFDASKK
YYQQAVSAYLAFDDKAKLSLSDAGATASSLFINDNVIPYRGPGYERIMLHQYQALNYLFAGDPQGALVEVRRSNELQSQE
QERYHKSNKSVQAMANGTIDAEMNKLSKAAGTTTSSFLNAYSYYTTGMLHEILGEPNDAFIDYRKAAQITPNNPYLQKDL
VRLAKQLSMPQYDEFKKRWGDAVMPNKGDGQVIIMLERGFVLEKQSFTVPFTIHGNWQTASLATYYPNRQPVRQGQVQGL
GTVLKTAPIANIDALAITALKEELPAALVRQAARIYAKSEMAQSVESQTKKRNNDIDYASIAMQIFNVVSEQADRRSWLT
LPEQAQIARSYVKAGSYSLMLDNDPADPIEVKSGRTTLVWIIDTGNYTRFYSIII

Specific function: Unknown

COG id: COG3014

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50572; Mature: 50572

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLLLATIMLSLSGCAFNSIFINYPSQMAPVKAQLNSPTPQNAAKIVEEKINGADGLL
CCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCEE
YAQEAGRSAQIAGNFDASKKYYQQAVSAYLAFDDKAKLSLSDAGATASSLFINDNVIPYR
EEHHCCCCEEEECCCCHHHHHHHHHHHHHHEECCCCEEEECCCCCCEEEEEEECCCCCCC
GPGYERIMLHQYQALNYLFAGDPQGALVEVRRSNELQSQEQERYHKSNKSVQAMANGTID
CCCHHHHHHHHHHHHCEEEECCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEHHCCCCH
AEMNKLSKAAGTTTSSFLNAYSYYTTGMLHEILGEPNDAFIDYRKAAQITPNNPYLQKDL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCEECCCCCHHHHHH
VRLAKQLSMPQYDEFKKRWGDAVMPNKGDGQVIIMLERGFVLEKQSFTVPFTIHGNWQTA
HHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCEEEECCCEEEEEEEECCCEEC
SLATYYPNRQPVRQGQVQGLGTVLKTAPIANIDALAITALKEELPAALVRQAARIYAKSE
EEEEECCCCCCCHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAQSVESQTKKRNNDIDYASIAMQIFNVVSEQADRRSWLTLPEQAQIARSYVKAGSYSLM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCEEEE
LDNDPADPIEVKSGRTTLVWIIDTGNYTRFYSIII
ECCCCCCCEEECCCCEEEEEEEECCCCEEEEEEEC
>Mature Secondary Structure
MRRLLLLATIMLSLSGCAFNSIFINYPSQMAPVKAQLNSPTPQNAAKIVEEKINGADGLL
CCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCEE
YAQEAGRSAQIAGNFDASKKYYQQAVSAYLAFDDKAKLSLSDAGATASSLFINDNVIPYR
EEHHCCCCEEEECCCCHHHHHHHHHHHHHHEECCCCEEEECCCCCCEEEEEEECCCCCCC
GPGYERIMLHQYQALNYLFAGDPQGALVEVRRSNELQSQEQERYHKSNKSVQAMANGTID
CCCHHHHHHHHHHHHCEEEECCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEHHCCCCH
AEMNKLSKAAGTTTSSFLNAYSYYTTGMLHEILGEPNDAFIDYRKAAQITPNNPYLQKDL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCEECCCCCHHHHHH
VRLAKQLSMPQYDEFKKRWGDAVMPNKGDGQVIIMLERGFVLEKQSFTVPFTIHGNWQTA
HHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCEEEECCCEEEEEEEECCCEEC
SLATYYPNRQPVRQGQVQGLGTVLKTAPIANIDALAITALKEELPAALVRQAARIYAKSE
EEEEECCCCCCCHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAQSVESQTKKRNNDIDYASIAMQIFNVVSEQADRRSWLTLPEQAQIARSYVKAGSYSLM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCEEEE
LDNDPADPIEVKSGRTTLVWIIDTGNYTRFYSIII
ECCCCCCCEEECCCCEEEEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA