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The map label for this gene is ydiY [H]

Identifier: 167622788

GI number: 167622788

Start: 1055533

End: 1056273

Strand: Direct

Name: ydiY [H]

Synonym: Shal_0848

Alternate gene names: 167622788

Gene position: 1055533-1056273 (Clockwise)

Preceding gene: 167622787

Following gene: 167622789

Centisome position: 20.19

GC content: 43.18

Gene sequence:

>741_bases
ATGAAAAGAATACTTACAGTTATGGCAGTGGTAATGGCTGCTCCTTTTGCTGCGCAAGCCGGTGCTGACTTTGTCGAAGG
TGATAAGACTTTTGCTGGCGAAGCTGAACTTGGTGCTACATTAACCACGGGTAACACAGAAACCTCGTCGGTGAAAGGCC
GTTTAAACATGCTACAAGAGCTGGGGAATTGGGAAAACCAATATCTGCTTGAAGCCTTATATAAAGAAGATACAGGCGAA
GTTACCGCTAAACGTTATTACGGTGGCATTCAGGGTGACTATCAGTTCGATGAAAAGAACTATATCTATATCACCGGCAA
CTATGAAGTCGATCCTTTCACTGGTTATGATTATAAAGCTGTTGTTTCTTCAGGTTACGGTCATAAGTTCATCGACAGCG
GGGATATGTTTCTAAGTGCCGAAGTGGGTCCTGGTTATATTTATAAGAAGCTAGATGACGAGCAATCGGCCCTGCTTGGT
TTTGACAACGAAGATAGCGTCGTTGCCCACGGTGCGGTTAACTTTACCTATGAGTTCAGCGAAAGCTCAAAGTTCACTCA
ACTCTTCGTTGCTGACTATGGCGATAGTTTAGAGGGGCGTTCTGAGTCGGCGATTACTGCCAATATCATCGGTGCTCTAG
CAATGAAGTTTGCGGTTATTGTTCGTTATAATAATAAACCGTTAGATGATAAAGAGAGTACAGATACAGAGACAAACATG
ACTCTGTTATACGCTTTCTAA

Upstream 100 bases:

>100_bases
ATAAATATAAGTTACTTGTATCTGGTATTTTCAATTATTTAACTGAAATGTTAATATTGCGCCGATTTTTAGGGAATTGG
GTGAATGGAGTACGAATAAT

Downstream 100 bases:

>100_bases
ATATATTGACAAAAATACAGTATGGATAGTTTGAAATTGTTCAGTCACCTATCCATTTGTAAAATGTTGTAAAGAAAAGG
TGTCGCTTAGATGCCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKRILTVMAVVMAAPFAAQAGADFVEGDKTFAGEAELGATLTTGNTETSSVKGRLNMLQELGNWENQYLLEALYKEDTGE
VTAKRYYGGIQGDYQFDEKNYIYITGNYEVDPFTGYDYKAVVSSGYGHKFIDSGDMFLSAEVGPGYIYKKLDDEQSALLG
FDNEDSVVAHGAVNFTYEFSESSKFTQLFVADYGDSLEGRSESAITANIIGALAMKFAVIVRYNNKPLDDKESTDTETNM
TLLYAF

Sequences:

>Translated_246_residues
MKRILTVMAVVMAAPFAAQAGADFVEGDKTFAGEAELGATLTTGNTETSSVKGRLNMLQELGNWENQYLLEALYKEDTGE
VTAKRYYGGIQGDYQFDEKNYIYITGNYEVDPFTGYDYKAVVSSGYGHKFIDSGDMFLSAEVGPGYIYKKLDDEQSALLG
FDNEDSVVAHGAVNFTYEFSESSKFTQLFVADYGDSLEGRSESAITANIIGALAMKFAVIVRYNNKPLDDKESTDTETNM
TLLYAF
>Mature_246_residues
MKRILTVMAVVMAAPFAAQAGADFVEGDKTFAGEAELGATLTTGNTETSSVKGRLNMLQELGNWENQYLLEALYKEDTGE
VTAKRYYGGIQGDYQFDEKNYIYITGNYEVDPFTGYDYKAVVSSGYGHKFIDSGDMFLSAEVGPGYIYKKLDDEQSALLG
FDNEDSVVAHGAVNFTYEFSESSKFTQLFVADYGDSLEGRSESAITANIIGALAMKFAVIVRYNNKPLDDKESTDTETNM
TLLYAF

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=264, Percent_Identity=24.6212121212121, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 27127; Mature: 27127

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILTVMAVVMAAPFAAQAGADFVEGDKTFAGEAELGATLTTGNTETSSVKGRLNMLQE
CHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH
LGNWENQYLLEALYKEDTGEVTAKRYYGGIQGDYQFDEKNYIYITGNYEVDPFTGYDYKA
HCCCCHHHHHHHHHHCCCCCEEEHHHCCCCCCCEEECCCCEEEEEECEEECCCCCCCHHE
VVSSGYGHKFIDSGDMFLSAEVGPGYIYKKLDDEQSALLGFDNEDSVVAHGAVNFTYEFS
EEECCCCCEEECCCCEEEEEECCCCEEEEECCCCCHHEECCCCCCCEEEECEEEEEEEEC
ESSKFTQLFVADYGDSLEGRSESAITANIIGALAMKFAVIVRYNNKPLDDKESTDTETNM
CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCE
TLLYAF
EEEEEC
>Mature Secondary Structure
MKRILTVMAVVMAAPFAAQAGADFVEGDKTFAGEAELGATLTTGNTETSSVKGRLNMLQE
CHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH
LGNWENQYLLEALYKEDTGEVTAKRYYGGIQGDYQFDEKNYIYITGNYEVDPFTGYDYKA
HCCCCHHHHHHHHHHCCCCCEEEHHHCCCCCCCEEECCCCEEEEEECEEECCCCCCCHHE
VVSSGYGHKFIDSGDMFLSAEVGPGYIYKKLDDEQSALLGFDNEDSVVAHGAVNFTYEFS
EEECCCCCEEECCCCEEEEEECCCCEEEEECCCCCHHEECCCCCCCEEEECEEEEEEEEC
ESSKFTQLFVADYGDSLEGRSESAITANIIGALAMKFAVIVRYNNKPLDDKESTDTETNM
CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCE
TLLYAF
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]