Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622772

Identifier: 167622772

GI number: 167622772

Start: 1034450

End: 1034800

Strand: Direct

Name: 167622772

Synonym: Shal_0832

Alternate gene names: NA

Gene position: 1034450-1034800 (Clockwise)

Preceding gene: 167622771

Following gene: 167622773

Centisome position: 19.79

GC content: 44.44

Gene sequence:

>351_bases
ATGTTGTCTGAATCTGTCGCCTCAATCTTTACTCCATACCTAACGTTAAATCTATCGGCTTTCGACAACCTTAAGTTAGT
GGTTGCGGTATTAACGGATAGAGGTGAAGAGTGTCACGCCCTAGAAACTGAGCTGACTGTTGACGGTAAGCAGCAAACTG
CTTATCTAGTGCGCTGGAACCATCACTTTATCTATTGTGGCCGCACTAACTCTTACGCTAATCAAATCGATGAAGTCGCT
GACTTAGAAGCGATTACAGCCGAATCGATTCAGGTGCTGCAGCCACCAGTACTTTCTATGCGACAGCTGGAATTTATGTG
CATGGAGAATGCACACTTTGACCATTGTTAA

Upstream 100 bases:

>100_bases
GTAAAGGTGGTATGCAAGTTGTCGATTATATCAGCTTCGATGGGCGTGATTATTACCTATTAGTGTTACCAACTAACGAA
AGCTTTTTCTAAGGATCTTT

Downstream 100 bases:

>100_bases
AGGTGTTTACTGTGAACTTTTGCGATAAGTTTAACTTATCGAGTGATTGCAAACACTTAACTGGCGTTTAACATTGGTGG
CTCTATTGGTTTATAAGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MLSESVASIFTPYLTLNLSAFDNLKLVVAVLTDRGEECHALETELTVDGKQQTAYLVRWNHHFIYCGRTNSYANQIDEVA
DLEAITAESIQVLQPPVLSMRQLEFMCMENAHFDHC

Sequences:

>Translated_116_residues
MLSESVASIFTPYLTLNLSAFDNLKLVVAVLTDRGEECHALETELTVDGKQQTAYLVRWNHHFIYCGRTNSYANQIDEVA
DLEAITAESIQVLQPPVLSMRQLEFMCMENAHFDHC
>Mature_116_residues
MLSESVASIFTPYLTLNLSAFDNLKLVVAVLTDRGEECHALETELTVDGKQQTAYLVRWNHHFIYCGRTNSYANQIDEVA
DLEAITAESIQVLQPPVLSMRQLEFMCMENAHFDHC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13166; Mature: 13166

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSESVASIFTPYLTLNLSAFDNLKLVVAVLTDRGEECHALETELTVDGKQQTAYLVRWN
CCCCHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEC
HHFIYCGRTNSYANQIDEVADLEAITAESIQVLQPPVLSMRQLEFMCMENAHFDHC
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLSESVASIFTPYLTLNLSAFDNLKLVVAVLTDRGEECHALETELTVDGKQQTAYLVRWN
CCCCHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEC
HHFIYCGRTNSYANQIDEVADLEAITAESIQVLQPPVLSMRQLEFMCMENAHFDHC
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA