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The map label for this gene is 167622770

Identifier: 167622770

GI number: 167622770

Start: 1032676

End: 1033596

Strand: Reverse

Name: 167622770

Synonym: Shal_0830

Alternate gene names: NA

Gene position: 1033596-1032676 (Counterclockwise)

Preceding gene: 167622774

Following gene: 167622768

Centisome position: 19.77

GC content: 43.76

Gene sequence:

>921_bases
ATGTTAGCCCAAAAAATTAATCACAACATTTGGATTAGAGAGCAAGACCACCCCGCTATTAGCTTGCCAAGGTGGCAGCA
ACAAGTCGACTTAATTGACGACCTTTATCAATCTAAAGCCACGGTTATTATTCAGTCTAACGGTAATCAGGCCCAGATAA
CCTGCAGCAGTAAGCAGGCTGACAATATCTTCTCCGGTGGCGATATGCTCCAAAGAGAAGGACTCATCGATGCAATCTGT
GAAACCATCAGCTACGGGCTAGTCCCATTTGAGCCCTCTAAAGTGGTTGGCAGCTTTGCTTGTTTCAACATATTGCTAGC
TATCAAACTCAATTGGCCAGATGGCAGATTATTTGGCTGCCTAGTGATTTGCGATCCCGCGGCTGATAAAGTTAGTGCGA
CCTCTGCAGCTGTCTGTGAATCAGTGAAAGCACTGATTCAGGGTGAGTTGAAACAGATGTACCTGATGGAGCAACTGCAG
AGAATGTCGGTACAGGATGAGTTTACCTGTATGCTCAACCCTTACGGCTTTAACCTAATGGCTCCTAGGCAATTGAGTTT
AAGCCGCCGCTTCGGTTCTCATGCTGGAATTATTGTATTAGAAGATATGCCAACCCCTGTGCATCAACAAAAATACACTG
AGTCACAACGGATCCGAATTATCGCTAGAGTCATTTCAGAAAGCATGCGTGAAGCCGATATTTCTGCTCGAATTCAAGAT
GAACAATTTATTATTCTCGCCTTTGTCGACAATGAGTCTAACCTCGATAGTTTAATTGCACGGTTACGTAAACGACTCAA
TAAGGAAGCACCGGAAATTAATCTCGTGACGGGTAAATGCTTTTTTACTCCTGACACTCAGCTGACATTAATTCCGATGC
AACAAGAGGCGATCGCAGATCTTGAGAAAAATAGGAAATAA

Upstream 100 bases:

>100_bases
GCTTTTACACTTTTAACATTTTAACAACCACAAAAAGTCCGTATAGTTATTCAAGCTTGATAAAACTATTTGCTGCCCTA
AAAAATAAGCGAGCTCACTC

Downstream 100 bases:

>100_bases
TAGGTTCTAGGAAAAGCTAAGACGAATGAAGCCGATAGAAGCTGAGACGGCAAAGGCTGGTAAGGCAAAGACGAGACAAG
CAGAAAAGCAAAACCACATC

Product: putative diguanylate cyclase

Products: NA

Alternate protein names: Diguanylate Cyclase; Diguanylate Cyclase With GAF Sensor

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLAQKINHNIWIREQDHPAISLPRWQQQVDLIDDLYQSKATVIIQSNGNQAQITCSSKQADNIFSGGDMLQREGLIDAIC
ETISYGLVPFEPSKVVGSFACFNILLAIKLNWPDGRLFGCLVICDPAADKVSATSAAVCESVKALIQGELKQMYLMEQLQ
RMSVQDEFTCMLNPYGFNLMAPRQLSLSRRFGSHAGIIVLEDMPTPVHQQKYTESQRIRIIARVISESMREADISARIQD
EQFIILAFVDNESNLDSLIARLRKRLNKEAPEINLVTGKCFFTPDTQLTLIPMQQEAIADLEKNRK

Sequences:

>Translated_306_residues
MLAQKINHNIWIREQDHPAISLPRWQQQVDLIDDLYQSKATVIIQSNGNQAQITCSSKQADNIFSGGDMLQREGLIDAIC
ETISYGLVPFEPSKVVGSFACFNILLAIKLNWPDGRLFGCLVICDPAADKVSATSAAVCESVKALIQGELKQMYLMEQLQ
RMSVQDEFTCMLNPYGFNLMAPRQLSLSRRFGSHAGIIVLEDMPTPVHQQKYTESQRIRIIARVISESMREADISARIQD
EQFIILAFVDNESNLDSLIARLRKRLNKEAPEINLVTGKCFFTPDTQLTLIPMQQEAIADLEKNRK
>Mature_306_residues
MLAQKINHNIWIREQDHPAISLPRWQQQVDLIDDLYQSKATVIIQSNGNQAQITCSSKQADNIFSGGDMLQREGLIDAIC
ETISYGLVPFEPSKVVGSFACFNILLAIKLNWPDGRLFGCLVICDPAADKVSATSAAVCESVKALIQGELKQMYLMEQLQ
RMSVQDEFTCMLNPYGFNLMAPRQLSLSRRFGSHAGIIVLEDMPTPVHQQKYTESQRIRIIARVISESMREADISARIQD
EQFIILAFVDNESNLDSLIARLRKRLNKEAPEINLVTGKCFFTPDTQLTLIPMQQEAIADLEKNRK

Specific function: Unknown

COG id: COG2203

COG function: function code T; FOG: GAF domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34505; Mature: 34505

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAQKINHNIWIREQDHPAISLPRWQQQVDLIDDLYQSKATVIIQSNGNQAQITCSSKQA
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCC
DNIFSGGDMLQREGLIDAICETISYGLVPFEPSKVVGSFACFNILLAIKLNWPDGRLFGC
CCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEEEEEECCCCCEEEE
LVICDPAADKVSATSAAVCESVKALIQGELKQMYLMEQLQRMSVQDEFTCMLNPYGFNLM
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEE
APRQLSLSRRFGSHAGIIVLEDMPTPVHQQKYTESQRIRIIARVISESMREADISARIQD
CCHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECC
EQFIILAFVDNESNLDSLIARLRKRLNKEAPEINLVTGKCFFTPDTQLTLIPMQQEAIAD
CEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCEEEEECCHHHHHH
LEKNRK
HHHCCC
>Mature Secondary Structure
MLAQKINHNIWIREQDHPAISLPRWQQQVDLIDDLYQSKATVIIQSNGNQAQITCSSKQA
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCC
DNIFSGGDMLQREGLIDAICETISYGLVPFEPSKVVGSFACFNILLAIKLNWPDGRLFGC
CCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEEEEEECCCCCEEEE
LVICDPAADKVSATSAAVCESVKALIQGELKQMYLMEQLQRMSVQDEFTCMLNPYGFNLM
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEE
APRQLSLSRRFGSHAGIIVLEDMPTPVHQQKYTESQRIRIIARVISESMREADISARIQD
CCHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECC
EQFIILAFVDNESNLDSLIARLRKRLNKEAPEINLVTGKCFFTPDTQLTLIPMQQEAIAD
CEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCEEEEECCHHHHHH
LEKNRK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA