Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622736

Identifier: 167622736

GI number: 167622736

Start: 991312

End: 992049

Strand: Direct

Name: 167622736

Synonym: Shal_0796

Alternate gene names: NA

Gene position: 991312-992049 (Clockwise)

Preceding gene: 167622735

Following gene: 167622738

Centisome position: 18.97

GC content: 49.05

Gene sequence:

>738_bases
ATGATCATTACTCAAGAAGTCCATGATATTTCGACCGCGACAGGAACCATGCGGACCTACCTATATCGTCCCGATTGCGA
AGGGCAATTCGCCACCATTATTTTCTACTCAGAGATTTTTCAGCAAACGGCGCCTATCGCCCGTGCGGCAGCGATCCTCG
CCGGTCATGGCTTTGTGGTATTGGTGCCTGAAGTATTCCACGAGCTTAATCCTATTGGCACCGTGCTGGCGTACGACGAT
ATCGGTAAAGACAAAGGTAATGCTGACAAGTTTGCTAAGCGCCTTGAACATCATGACAGTGACACCGAAGCACTGGTCGA
CTTTGCTCGTAGTTTGATTTTTTGCAGTAGTCATATCGGTAGCATGGGGGTGTGTATTGGCGGGCACTTAGCCTATCGCG
CTGCGCTAAATCCCGATATTCAAGGAGCCTTCTGTTTGTACCCAACCGATATTCATTCCAACACTTTGCCTTGTGACAAA
GGCAATGACTCCTTGAGCCGAACCGGCGATATAGCAGCCGAGTTAGTGATGATATTTGGTAAACAAGACCCCCATGTTTC
AAGCGAGGGGCGCAAGCTGGTGTATGACAAGCTTGAAGCAACTGAGGCTAAGTTTAACTGGTTGGAAGTCAACGCTCAAC
ACGCCTTTATGCGTGATGAAGATATTAGGCATGACCCGGCGCTCGCACTGCAGATGTATCTGCAGGCGGTGGCATTTTTT
CAACGAACGCTCAAGTAA

Upstream 100 bases:

>100_bases
GGATAGATTATAATCGATACAAGAAGATAGCCATTATCTTACCGCTTGTCGCAAATGTGGCGAGTCATAGCTTAGCTAAC
AGCGTCTAAGGAAAGAGCCG

Downstream 100 bases:

>100_bases
CTACGTTCAAGTAAATACGCTCAAGTAACGCAGCAAGCGTTAATCGTTTTGAATCAACACGGATAAAAAAAGGGCCAGTA
TGACTGGCCCTTTTCAGATC

Product: dienelactone hydrolase

Products: NA

Alternate protein names: Carboxymethylenebutenolidase; Dienelactone Hydrolase Family Protein; Dienelactone Hydrolase Family; Hydrolase; Carboxymethylenebutenolidase Family Protein; Threonyl-TRNA Synthetase Class IIA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MIITQEVHDISTATGTMRTYLYRPDCEGQFATIIFYSEIFQQTAPIARAAAILAGHGFVVLVPEVFHELNPIGTVLAYDD
IGKDKGNADKFAKRLEHHDSDTEALVDFARSLIFCSSHIGSMGVCIGGHLAYRAALNPDIQGAFCLYPTDIHSNTLPCDK
GNDSLSRTGDIAAELVMIFGKQDPHVSSEGRKLVYDKLEATEAKFNWLEVNAQHAFMRDEDIRHDPALALQMYLQAVAFF
QRTLK

Sequences:

>Translated_245_residues
MIITQEVHDISTATGTMRTYLYRPDCEGQFATIIFYSEIFQQTAPIARAAAILAGHGFVVLVPEVFHELNPIGTVLAYDD
IGKDKGNADKFAKRLEHHDSDTEALVDFARSLIFCSSHIGSMGVCIGGHLAYRAALNPDIQGAFCLYPTDIHSNTLPCDK
GNDSLSRTGDIAAELVMIFGKQDPHVSSEGRKLVYDKLEATEAKFNWLEVNAQHAFMRDEDIRHDPALALQMYLQAVAFF
QRTLK
>Mature_245_residues
MIITQEVHDISTATGTMRTYLYRPDCEGQFATIIFYSEIFQQTAPIARAAAILAGHGFVVLVPEVFHELNPIGTVLAYDD
IGKDKGNADKFAKRLEHHDSDTEALVDFARSLIFCSSHIGSMGVCIGGHLAYRAALNPDIQGAFCLYPTDIHSNTLPCDK
GNDSLSRTGDIAAELVMIFGKQDPHVSSEGRKLVYDKLEATEAKFNWLEVNAQHAFMRDEDIRHDPALALQMYLQAVAFF
QRTLK

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320117, Length=231, Percent_Identity=41.5584415584416, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27195; Mature: 27195

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITQEVHDISTATGTMRTYLYRPDCEGQFATIIFYSEIFQQTAPIARAAAILAGHGFVV
CCCCCCHHHHHHHCCHHEEEEECCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHCCCEEE
LVPEVFHELNPIGTVLAYDDIGKDKGNADKFAKRLEHHDSDTEALVDFARSLIFCSSHIG
ECHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
SMGVCIGGHLAYRAALNPDIQGAFCLYPTDIHSNTLPCDKGNDSLSRTGDIAAELVMIFG
CCEEEECCHHHEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
KQDPHVSSEGRKLVYDKLEATEAKFNWLEVNAQHAFMRDEDIRHDPALALQMYLQAVAFF
CCCCCCCCCCCEEHHHHHHHHHHHCEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QRTLK
HHHCC
>Mature Secondary Structure
MIITQEVHDISTATGTMRTYLYRPDCEGQFATIIFYSEIFQQTAPIARAAAILAGHGFVV
CCCCCCHHHHHHHCCHHEEEEECCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHCCCEEE
LVPEVFHELNPIGTVLAYDDIGKDKGNADKFAKRLEHHDSDTEALVDFARSLIFCSSHIG
ECHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
SMGVCIGGHLAYRAALNPDIQGAFCLYPTDIHSNTLPCDKGNDSLSRTGDIAAELVMIFG
CCEEEECCHHHEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
KQDPHVSSEGRKLVYDKLEATEAKFNWLEVNAQHAFMRDEDIRHDPALALQMYLQAVAFF
CCCCCCCCCCCEEHHHHHHHHHHHCEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QRTLK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA