Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622729

Identifier: 167622729

GI number: 167622729

Start: 985596

End: 986702

Strand: Direct

Name: 167622729

Synonym: Shal_0789

Alternate gene names: NA

Gene position: 985596-986702 (Clockwise)

Preceding gene: 167622728

Following gene: 167622735

Centisome position: 18.86

GC content: 47.61

Gene sequence:

>1107_bases
ATGAAATTTACCCAATCGAGCCTAAAGGTAGGTGAGTTGGCTACGGGGCAGGAGCTTAATGTTCCTGTTTACCGACTTCC
TGCACAGGACCTTAGTGCGCCGAGCGTATTTATTCAGGCCAATGTGCATGGCGCCGAGGTGCAAGGTAACGCGGTGATTT
TTCAGTTGATGAAGCAGCTGGAGACGATGGATGTTAAGGGGGAAGTGACGTTACTTCCCTTGGCTAACCCGTTAGGGATT
AATCAAAAAAGTGGTGAGTTCACCCTTGGGCGTTTCGATCCTATCACTGGGGTTAACTGGAACAGAGAATATCTAGATCA
CAAACTCGATGTCGCCAGTTGGTATCAAGAGAATGCTCATCTAGAAGACAAGGCGTTGATCAAGGCATACCGTTTGTTAT
TGATTGAGTCATGTCAGGCTCACTTAAATAGTGAGTGGGGCGTGACCACAGGCAAACGCCTTGCGGTGACGCTGCAGTCG
ATGGCCCATGCAGCCGATATCGTTATCGATCTGCATACTGGCCCTAAGTCTTGTAAGCATATGTATTGTCCCGAATACGA
TGTGGATTCAGCATCGTATTTCTCTATTCCCTTTACTCTTGTGATCCCTAATGATTTTGGTGGCGCCATGGATGAAGCGG
TGTTTTGCCCTTGGTGGCAGCTGGCTGACTATGCGCAATCACAGGGACGCACTCTAGGCGTTCCTGTATCTGCATTTACT
TTGGAGTTAGCTAGCCAAGAGCGTATCGATATGGATGATGCCCTTAACGATGCTCAGGGGATCTTAGCCTACTTGAGTCA
TCGTGGTGTGGTCAGCGATAAAGTTGCACCAGCTCAAATGCCAAGGTACGGCTGTTATCTAAAAGACTATAAGAAGTTTC
ATGCGCCAACGGCGGGGATGGTTGAGTATAAAGCTGAGCTGGGTGAGCCATTGCAAACGGGTGAGACTCTGGCAAATATT
TTAAGGCTGGATCTGTATGGCACTGATAACGAGTTGACTCCGTTAAGTCTTAAGCAAGATTGTGTGCCTATCCTGCATTT
TGCATCAGCTTCTGTCTATCAGGGCACCGAACTCTACAAGGTAATGACCAATCTGTTTGAGCTTTAA

Upstream 100 bases:

>100_bases
CCAATGTTATTCGCGCCCTGCATGAAAACCTGTTTGAAGCCTAGATAACAGATAACAGATAACTGCTAACAGATAGAGAT
GAAAGGTAACCGAGTCATTG

Downstream 100 bases:

>100_bases
CTATGAGCGAGCTCATAATATGTAAAAGGCTAACATCAGTTAGCCTTTTTTATTGTCATCTAGACAAGAGCTAAGGCTTA
ACCGCCCGTACGATGGGGTT

Product: succinylglutamate desuccinylase/aspartoacylase

Products: NA

Alternate protein names: Deacylase; Arginine Catabolism Protein; Succinylglutamate Desuccinylase; Amino Acid ABC Transporter-Like Protein; Arginine/Ornithine Transport Operon(AotO) Protein; Succinylglutamate Desuccinylase / Aspartoacylase Family

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKFTQSSLKVGELATGQELNVPVYRLPAQDLSAPSVFIQANVHGAEVQGNAVIFQLMKQLETMDVKGEVTLLPLANPLGI
NQKSGEFTLGRFDPITGVNWNREYLDHKLDVASWYQENAHLEDKALIKAYRLLLIESCQAHLNSEWGVTTGKRLAVTLQS
MAHAADIVIDLHTGPKSCKHMYCPEYDVDSASYFSIPFTLVIPNDFGGAMDEAVFCPWWQLADYAQSQGRTLGVPVSAFT
LELASQERIDMDDALNDAQGILAYLSHRGVVSDKVAPAQMPRYGCYLKDYKKFHAPTAGMVEYKAELGEPLQTGETLANI
LRLDLYGTDNELTPLSLKQDCVPILHFASASVYQGTELYKVMTNLFEL

Sequences:

>Translated_368_residues
MKFTQSSLKVGELATGQELNVPVYRLPAQDLSAPSVFIQANVHGAEVQGNAVIFQLMKQLETMDVKGEVTLLPLANPLGI
NQKSGEFTLGRFDPITGVNWNREYLDHKLDVASWYQENAHLEDKALIKAYRLLLIESCQAHLNSEWGVTTGKRLAVTLQS
MAHAADIVIDLHTGPKSCKHMYCPEYDVDSASYFSIPFTLVIPNDFGGAMDEAVFCPWWQLADYAQSQGRTLGVPVSAFT
LELASQERIDMDDALNDAQGILAYLSHRGVVSDKVAPAQMPRYGCYLKDYKKFHAPTAGMVEYKAELGEPLQTGETLANI
LRLDLYGTDNELTPLSLKQDCVPILHFASASVYQGTELYKVMTNLFEL
>Mature_368_residues
MKFTQSSLKVGELATGQELNVPVYRLPAQDLSAPSVFIQANVHGAEVQGNAVIFQLMKQLETMDVKGEVTLLPLANPLGI
NQKSGEFTLGRFDPITGVNWNREYLDHKLDVASWYQENAHLEDKALIKAYRLLLIESCQAHLNSEWGVTTGKRLAVTLQS
MAHAADIVIDLHTGPKSCKHMYCPEYDVDSASYFSIPFTLVIPNDFGGAMDEAVFCPWWQLADYAQSQGRTLGVPVSAFT
LELASQERIDMDDALNDAQGILAYLSHRGVVSDKVAPAQMPRYGCYLKDYKKFHAPTAGMVEYKAELGEPLQTGETLANI
LRLDLYGTDNELTPLSLKQDCVPILHFASASVYQGTELYKVMTNLFEL

Specific function: Unknown

COG id: COG3608

COG function: function code R; Predicted deacylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40816; Mature: 40816

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTQSSLKVGELATGQELNVPVYRLPAQDLSAPSVFIQANVHGAEVQGNAVIFQLMKQL
CCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCEEEEEECCCCCEECCCHHHHHHHHHH
ETMDVKGEVTLLPLANPLGINQKSGEFTLGRFDPITGVNWNREYLDHKLDVASWYQENAH
HHCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
LEDKALIKAYRLLLIESCQAHLNSEWGVTTGKRLAVTLQSMAHAADIVIDLHTGPKSCKH
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCEEEEEEEECCCCHHHCC
MYCPEYDVDSASYFSIPFTLVIPNDFGGAMDEAVFCPWWQLADYAQSQGRTLGVPVSAFT
CCCCCCCCCCCEEEECEEEEEEECCCCCCHHCCEECCHHHHHHHHHHCCCEEECCHHHHH
LELASQERIDMDDALNDAQGILAYLSHRGVVSDKVAPAQMPRYGCYLKDYKKFHAPTAGM
EEHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCHH
VEYKAELGEPLQTGETLANILRLDLYGTDNELTPLSLKQDCVPILHFASASVYQGTELYK
HHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH
VMTNLFEL
HHHHHHCC
>Mature Secondary Structure
MKFTQSSLKVGELATGQELNVPVYRLPAQDLSAPSVFIQANVHGAEVQGNAVIFQLMKQL
CCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCEEEEEECCCCCEECCCHHHHHHHHHH
ETMDVKGEVTLLPLANPLGINQKSGEFTLGRFDPITGVNWNREYLDHKLDVASWYQENAH
HHCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
LEDKALIKAYRLLLIESCQAHLNSEWGVTTGKRLAVTLQSMAHAADIVIDLHTGPKSCKH
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCEEEEEEEECCCCHHHCC
MYCPEYDVDSASYFSIPFTLVIPNDFGGAMDEAVFCPWWQLADYAQSQGRTLGVPVSAFT
CCCCCCCCCCCEEEECEEEEEEECCCCCCHHCCEECCHHHHHHHHHHCCCEEECCHHHHH
LELASQERIDMDDALNDAQGILAYLSHRGVVSDKVAPAQMPRYGCYLKDYKKFHAPTAGM
EEHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCHH
VEYKAELGEPLQTGETLANILRLDLYGTDNELTPLSLKQDCVPILHFASASVYQGTELYK
HHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH
VMTNLFEL
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA