Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622722

Identifier: 167622722

GI number: 167622722

Start: 976092

End: 976871

Strand: Direct

Name: 167622722

Synonym: Shal_0782

Alternate gene names: NA

Gene position: 976092-976871 (Clockwise)

Preceding gene: 167622721

Following gene: 167622723

Centisome position: 18.67

GC content: 37.18

Gene sequence:

>780_bases
TTGAACAATACAAGTTTCTATAAGTATTGCCCTGTTGATCAAGATGAAAACTTTGAGCAAGAGTATTCACTGATCAATCT
TTTTAACTCCGAAGTTACATTCTCAACGAGGAAGAACTTCAATGATCTGTTTGATTCAAAAATCAATTTCATTTCCCCTG
ATAGAAGTCAGCTGAAAAAGATAGCAGGAAGCTTGCCTGCTTCAAAGCGAGCTGAATTCAGACGCTTGTATTTAGGTGAA
GACTGGCAGGCAAAAATTCGTAAATTTAACGATGACATTGAAAAACTGTTCGACAGTTACCTGTATTACTGCGTCACAGA
TTGTGAAACAAGCAATTTGATGTGGTCACACTATGCAAGCTCACACGCTGGCTTTTGTATAGAGTGGGACGCGAACATGG
TCAAAGCTGAAAAGGTAACTTATCAAAGTGATATAGCTGATTTTAAGCTTCTCGACCTGATAAAAATTCACTGTGGATCG
ATGTCTAAAGATGATGTAGGTATCCGTATCTGGGAATCTCTTCTAATTAAGCTGGATGAATGGGAGTATGAGTCAGAGTA
TCGATTTCAAATGAGCCATGCAATGGATCACCTGATTTCGAAGCAGGGAGAAAAATTTGCACTAGTAAAATATCAGCCAG
AATGGATTAAATCGATAATATTCGGGTGCAGAACTTCAGATAAGACTAAGTCATACATCAAAGAAAATTTGCCCTATAAG
GTAAAGTTTAAACAAGCTTATGTGGCGAAAAGTAGTATTAAGATTCGTAATTTAGAGTGA

Upstream 100 bases:

>100_bases
GCCATTTGGTATGGTGTGGTAGCAGCTAGGTTGAATTTTAAACGGAACATTATCGAGCAGCTAGATAATAAGCTGTTATA
TCATCCAAGGAAGACAGTAA

Downstream 100 bases:

>100_bases
TATAACAAACGCGTGCATTTGACCTCCGCTTCGCTGCGGCAAATGACGCGGGCGTTATACATTCGGAGCAACTAATTGGA
AAATAATGAGCTTATAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNNTSFYKYCPVDQDENFEQEYSLINLFNSEVTFSTRKNFNDLFDSKINFISPDRSQLKKIAGSLPASKRAEFRRLYLGE
DWQAKIRKFNDDIEKLFDSYLYYCVTDCETSNLMWSHYASSHAGFCIEWDANMVKAEKVTYQSDIADFKLLDLIKIHCGS
MSKDDVGIRIWESLLIKLDEWEYESEYRFQMSHAMDHLISKQGEKFALVKYQPEWIKSIIFGCRTSDKTKSYIKENLPYK
VKFKQAYVAKSSIKIRNLE

Sequences:

>Translated_259_residues
MNNTSFYKYCPVDQDENFEQEYSLINLFNSEVTFSTRKNFNDLFDSKINFISPDRSQLKKIAGSLPASKRAEFRRLYLGE
DWQAKIRKFNDDIEKLFDSYLYYCVTDCETSNLMWSHYASSHAGFCIEWDANMVKAEKVTYQSDIADFKLLDLIKIHCGS
MSKDDVGIRIWESLLIKLDEWEYESEYRFQMSHAMDHLISKQGEKFALVKYQPEWIKSIIFGCRTSDKTKSYIKENLPYK
VKFKQAYVAKSSIKIRNLE
>Mature_259_residues
MNNTSFYKYCPVDQDENFEQEYSLINLFNSEVTFSTRKNFNDLFDSKINFISPDRSQLKKIAGSLPASKRAEFRRLYLGE
DWQAKIRKFNDDIEKLFDSYLYYCVTDCETSNLMWSHYASSHAGFCIEWDANMVKAEKVTYQSDIADFKLLDLIKIHCGS
MSKDDVGIRIWESLLIKLDEWEYESEYRFQMSHAMDHLISKQGEKFALVKYQPEWIKSIIFGCRTSDKTKSYIKENLPYK
VKFKQAYVAKSSIKIRNLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30629; Mature: 30629

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNTSFYKYCPVDQDENFEQEYSLINLFNSEVTFSTRKNFNDLFDSKINFISPDRSQLKK
CCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEEHHCCHHHHHHCCCCCCCCCHHHHHH
IAGSLPASKRAEFRRLYLGEDWQAKIRKFNDDIEKLFDSYLYYCVTDCETSNLMWSHYAS
HHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEHEECCCCCCCCHHHHCC
SHAGFCIEWDANMVKAEKVTYQSDIADFKLLDLIKIHCGSMSKDDVGIRIWESLLIKLDE
CCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
WEYESEYRFQMSHAMDHLISKQGEKFALVKYQPEWIKSIIFGCRTSDKTKSYIKENLPYK
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHCCCEE
VKFKQAYVAKSSIKIRNLE
EEEHHHHHHHCCEEEECCC
>Mature Secondary Structure
MNNTSFYKYCPVDQDENFEQEYSLINLFNSEVTFSTRKNFNDLFDSKINFISPDRSQLKK
CCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEEHHCCHHHHHHCCCCCCCCCHHHHHH
IAGSLPASKRAEFRRLYLGEDWQAKIRKFNDDIEKLFDSYLYYCVTDCETSNLMWSHYAS
HHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEHEECCCCCCCCHHHHCC
SHAGFCIEWDANMVKAEKVTYQSDIADFKLLDLIKIHCGSMSKDDVGIRIWESLLIKLDE
CCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
WEYESEYRFQMSHAMDHLISKQGEKFALVKYQPEWIKSIIFGCRTSDKTKSYIKENLPYK
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHCCCEE
VKFKQAYVAKSSIKIRNLE
EEEHHHHHHHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA