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The map label for this gene is fccA [H]

Identifier: 167622716

GI number: 167622716

Start: 966231

End: 968021

Strand: Direct

Name: fccA [H]

Synonym: Shal_0776

Alternate gene names: 167622716

Gene position: 966231-968021 (Clockwise)

Preceding gene: 167622713

Following gene: 167622717

Centisome position: 18.49

GC content: 47.52

Gene sequence:

>1791_bases
ATGAAAAACTTTAAAAAAGCAGTGTGTATCGCAACACTTCTAGGCTCAGCAGGCTTTATGTCTAACGCCATTGCTGCTGA
TAACTTGGCAGAGTTCCACGGTGAAAACCAAGAGTGTGATAGCTGCCACATGCCAGACGGTGAGCTTTCAAACGATAGCT
TAACCTACGAGAACGCACAATGTGTAGCTTGTCACGGCACACTCGCTGAAGTTGCTGAAGAAACAAAACATGAGCACTAC
AATGCCCATGACTCTCATTTCCCTGGCGAAGTGGCTTGTACTTCTTGTCACAGCGCTCACGAAAAATCTATGGTCTACTG
TGACTCTTGCCATAGCTTCGACTTTGACATGCCTTACACTAAGAAGTGGGAACGTCACGAGCCAAGCATCGATGAGCTAT
TAAAAGACACTGAAGATCGTCAAGCGGCGCTTGCTGAAGCACCGCGTGACACCGTTGATGTTGTCGTTGTAGGTTCAGGT
GGTGCAGGTTTCTCTGCAGCAGTATCTGCACACGATCACGGCGCTAGCGTTATTCTTATTGAAAAAGAGCCACTCATTGG
TGGTAACGCTAAGCTTGCTGCGGGTGGCATGAACGCCGCTTGGACCGATCAGCAAAAAGCAAAAGGCATCAAAGACAGCG
TTGAGTCTATGTACAAAGACACCATGAAAGGTGGTCGTGACCTAAATGAGCCAGAGCTAGTTGAAGTATTGACTTCACAC
TCTAAAGGTTCAGTTGATTGGTTGACTGCCATGGGCGCAGATTTAAATGACGTAGGTCGTATGGGTGGCGCTTCAGCTAA
CCGTTCACACCGTCCAACCGGTGGTGCAGGTGTGGGTGCTCACGTAATCCAAGTACTATACGATAACGCGGTTAAGCGTG
ACGTTGATATGCGCATGAACACCCGTGGTATTGAAATCCTTAAAGACGATAAAGGCAACGTTAAGGGTCTGCTCGTTAAA
GGTATGTACAAGGGTTACTACTGGATTAAAGCTGACGCAGTTATCCTAGCAACAGGTGGTTTTGCTAAGAACAACGATCG
TGTCGCTAAGCTTGATCCTAAGCTAAAAGGCTTCATCTCAACTAACCAACCCGGTGCAACAGGTGACGGTATCGATGTAG
CAGGTAATGCAGGTGCTGCGATGACAGACCTACAGTACATTCAAGCTCACCCAACGCTATCTGTTAAAGGTGGTGTGATG
GTAACTGAAGCGGTTCGTGGTAACGGTGCAATTTTAGTTAACCGTGAAGGTAAGCGCTTCGTCAACGAAATCACTACACG
TGATAAGGCTTCTGCAGCGATTCTGAACCAAACAGGTAAGTCTGCGTTCCTAATCTTCGATGACTCAGTACGTAAGTCTC
TGAGTAAGATTGATAAGTATATCGGTCTAGGTGTTGCTCCAAGCGCTGACTCGCTAATTAAGCTGGGCGAGATGGAAGAG
ATTGATGGTAAAGCCCTTACTGAAGCCGTTGCACGCTACAACAGCTTTGTTAAGAGCGGTAAGGACGCAGACTTCGGTCG
TCCTAACCTACCTCGTGCCCTTAACGAAGGTAACTACTATGCAATCGAAGTGACTCCTGGTGTTCACCACACTATGGGCG
GCGTGAAGATTGACTCTAAAGCTGAAATCATGAACGCGAAGCAGCAAGTTATCCCAGGTCTATATGGCGCGGGTGAAGTA
ACTGGTGGTGTTCACGGTGCTAACCGTTTAGGTGGTAACGCTATCTCTGATATCGTCACCTTCGGTAGAATGGCTGGTGA
GAATGCAGCTGAGTACTCTAAGAAGAACTAG

Upstream 100 bases:

>100_bases
ACCTCGAATTGAGTATTTAAGACAGCATTTATGACTGTCGTATATAACGTGATAGCTTTTTGCGCTGCTGATTGCAGCAA
TAAAAAGGCGAGGAAATGAG

Downstream 100 bases:

>100_bases
TCTTCTTTAGATTAATCTTGGAAGTGTTAGTCGGGGTTGAGATTTGAGTTAAGTTTCAGCCTTCGATTAAGAAGCAAAAG
CCTTCATCTTATAGATGGAG

Product: flavocytochrome c

Products: NA

Alternate protein names: Flavocytochrome c; Flavocytochrome c3; Fcc3 [H]

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MKNFKKAVCIATLLGSAGFMSNAIAADNLAEFHGENQECDSCHMPDGELSNDSLTYENAQCVACHGTLAEVAEETKHEHY
NAHDSHFPGEVACTSCHSAHEKSMVYCDSCHSFDFDMPYTKKWERHEPSIDELLKDTEDRQAALAEAPRDTVDVVVVGSG
GAGFSAAVSAHDHGASVILIEKEPLIGGNAKLAAGGMNAAWTDQQKAKGIKDSVESMYKDTMKGGRDLNEPELVEVLTSH
SKGSVDWLTAMGADLNDVGRMGGASANRSHRPTGGAGVGAHVIQVLYDNAVKRDVDMRMNTRGIEILKDDKGNVKGLLVK
GMYKGYYWIKADAVILATGGFAKNNDRVAKLDPKLKGFISTNQPGATGDGIDVAGNAGAAMTDLQYIQAHPTLSVKGGVM
VTEAVRGNGAILVNREGKRFVNEITTRDKASAAILNQTGKSAFLIFDDSVRKSLSKIDKYIGLGVAPSADSLIKLGEMEE
IDGKALTEAVARYNSFVKSGKDADFGRPNLPRALNEGNYYAIEVTPGVHHTMGGVKIDSKAEIMNAKQQVIPGLYGAGEV
TGGVHGANRLGGNAISDIVTFGRMAGENAAEYSKKN

Sequences:

>Translated_596_residues
MKNFKKAVCIATLLGSAGFMSNAIAADNLAEFHGENQECDSCHMPDGELSNDSLTYENAQCVACHGTLAEVAEETKHEHY
NAHDSHFPGEVACTSCHSAHEKSMVYCDSCHSFDFDMPYTKKWERHEPSIDELLKDTEDRQAALAEAPRDTVDVVVVGSG
GAGFSAAVSAHDHGASVILIEKEPLIGGNAKLAAGGMNAAWTDQQKAKGIKDSVESMYKDTMKGGRDLNEPELVEVLTSH
SKGSVDWLTAMGADLNDVGRMGGASANRSHRPTGGAGVGAHVIQVLYDNAVKRDVDMRMNTRGIEILKDDKGNVKGLLVK
GMYKGYYWIKADAVILATGGFAKNNDRVAKLDPKLKGFISTNQPGATGDGIDVAGNAGAAMTDLQYIQAHPTLSVKGGVM
VTEAVRGNGAILVNREGKRFVNEITTRDKASAAILNQTGKSAFLIFDDSVRKSLSKIDKYIGLGVAPSADSLIKLGEMEE
IDGKALTEAVARYNSFVKSGKDADFGRPNLPRALNEGNYYAIEVTPGVHHTMGGVKIDSKAEIMNAKQQVIPGLYGAGEV
TGGVHGANRLGGNAISDIVTFGRMAGENAAEYSKKN
>Mature_596_residues
MKNFKKAVCIATLLGSAGFMSNAIAADNLAEFHGENQECDSCHMPDGELSNDSLTYENAQCVACHGTLAEVAEETKHEHY
NAHDSHFPGEVACTSCHSAHEKSMVYCDSCHSFDFDMPYTKKWERHEPSIDELLKDTEDRQAALAEAPRDTVDVVVVGSG
GAGFSAAVSAHDHGASVILIEKEPLIGGNAKLAAGGMNAAWTDQQKAKGIKDSVESMYKDTMKGGRDLNEPELVEVLTSH
SKGSVDWLTAMGADLNDVGRMGGASANRSHRPTGGAGVGAHVIQVLYDNAVKRDVDMRMNTRGIEILKDDKGNVKGLLVK
GMYKGYYWIKADAVILATGGFAKNNDRVAKLDPKLKGFISTNQPGATGDGIDVAGNAGAAMTDLQYIQAHPTLSVKGGVM
VTEAVRGNGAILVNREGKRFVNEITTRDKASAAILNQTGKSAFLIFDDSVRKSLSKIDKYIGLGVAPSADSLIKLGEMEE
IDGKALTEAVARYNSFVKSGKDADFGRPNLPRALNEGNYYAIEVTPGVHHTMGGVKIDSKAEIMNAKQQVIPGLYGAGEV
TGGVHGANRLGGNAISDIVTFGRMAGENAAEYSKKN

Specific function: Catalyzes fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown, but evidence indicates that flavocytochrome c participates in electron transfer from formate to fumarate and possibly also to tr

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI156416003, Length=409, Percent_Identity=25.6723716381418, Blast_Score=124, Evalue=3e-28,
Organism=Escherichia coli, GI1790597, Length=408, Percent_Identity=28.921568627451, Blast_Score=135, Evalue=9e-33,
Organism=Escherichia coli, GI1786942, Length=470, Percent_Identity=27.8723404255319, Blast_Score=112, Evalue=8e-26,
Organism=Escherichia coli, GI1788928, Length=481, Percent_Identity=24.7401247401247, Blast_Score=111, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71986328, Length=477, Percent_Identity=33.1236897274633, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17505833, Length=415, Percent_Identity=26.2650602409639, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17550100, Length=415, Percent_Identity=25.7831325301205, Blast_Score=114, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6322511, Length=467, Percent_Identity=31.4775160599572, Blast_Score=214, Evalue=3e-56,
Organism=Saccharomyces cerevisiae, GI6320788, Length=466, Percent_Identity=31.3304721030043, Blast_Score=196, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6322416, Length=421, Percent_Identity=26.1282660332542, Blast_Score=110, Evalue=8e-25,
Organism=Saccharomyces cerevisiae, GI6322701, Length=426, Percent_Identity=25.1173708920188, Blast_Score=107, Evalue=4e-24,
Organism=Drosophila melanogaster, GI17137288, Length=421, Percent_Identity=26.603325415677, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24655642, Length=421, Percent_Identity=26.603325415677, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24655647, Length=421, Percent_Identity=26.603325415677, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24663005, Length=467, Percent_Identity=24.6252676659529, Blast_Score=100, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031
- InterPro:   IPR012286
- InterPro:   IPR007087 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 63428; Mature: 63428

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00028 ZINC_FINGER_C2H2_1 ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFKKAVCIATLLGSAGFMSNAIAADNLAEFHGENQECDSCHMPDGELSNDSLTYENAQ
CCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCE
CVACHGTLAEVAEETKHEHYNAHDSHFPGEVACTSCHSAHEKSMVYCDSCHSFDFDMPYT
EEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHCCEEEECCCCCCCCCCCCC
KKWERHEPSIDELLKDTEDRQAALAEAPRDTVDVVVVGSGGAGFSAAVSAHDHGASVILI
CCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEEE
EKEPLIGGNAKLAAGGMNAAWTDQQKAKGIKDSVESMYKDTMKGGRDLNEPELVEVLTSH
ECCCCCCCCCEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
SKGSVDWLTAMGADLNDVGRMGGASANRSHRPTGGAGVGAHVIQVLYDNAVKRDVDMRMN
CCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEC
TRGIEILKDDKGNVKGLLVKGMYKGYYWIKADAVILATGGFAKNNDRVAKLDPKLKGFIS
CCCCEEEECCCCCEEEEEEEEEECCEEEEEECEEEEEECCCCCCCCEEEEECCCHHEEEE
TNQPGATGDGIDVAGNAGAAMTDLQYIQAHPTLSVKGGVMVTEAVRGNGAILVNREGKRF
CCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEECCCEEEEEEECCCCEEEEECCCHHH
VNEITTRDKASAAILNQTGKSAFLIFDDSVRKSLSKIDKYIGLGVAPSADSLIKLGEMEE
HHHHHCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHH
IDGKALTEAVARYNSFVKSGKDADFGRPNLPRALNEGNYYAIEVTPGVHHTMGGVKIDSK
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCEEECCH
AEIMNAKQQVIPGLYGAGEVTGGVHGANRLGGNAISDIVTFGRMAGENAAEYSKKN
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure
MKNFKKAVCIATLLGSAGFMSNAIAADNLAEFHGENQECDSCHMPDGELSNDSLTYENAQ
CCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCE
CVACHGTLAEVAEETKHEHYNAHDSHFPGEVACTSCHSAHEKSMVYCDSCHSFDFDMPYT
EEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHCCEEEECCCCCCCCCCCCC
KKWERHEPSIDELLKDTEDRQAALAEAPRDTVDVVVVGSGGAGFSAAVSAHDHGASVILI
CCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEEE
EKEPLIGGNAKLAAGGMNAAWTDQQKAKGIKDSVESMYKDTMKGGRDLNEPELVEVLTSH
ECCCCCCCCCEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
SKGSVDWLTAMGADLNDVGRMGGASANRSHRPTGGAGVGAHVIQVLYDNAVKRDVDMRMN
CCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEC
TRGIEILKDDKGNVKGLLVKGMYKGYYWIKADAVILATGGFAKNNDRVAKLDPKLKGFIS
CCCCEEEECCCCCEEEEEEEEEECCEEEEEECEEEEEECCCCCCCCEEEEECCCHHEEEE
TNQPGATGDGIDVAGNAGAAMTDLQYIQAHPTLSVKGGVMVTEAVRGNGAILVNREGKRF
CCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEECCCEEEEEEECCCCEEEEECCCHHH
VNEITTRDKASAAILNQTGKSAFLIFDDSVRKSLSKIDKYIGLGVAPSADSLIKLGEMEE
HHHHHCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHH
IDGKALTEAVARYNSFVKSGKDADFGRPNLPRALNEGNYYAIEVTPGVHHTMGGVKIDSK
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCEEECCH
AEIMNAKQQVIPGLYGAGEVTGGVHGANRLGGNAISDIVTFGRMAGENAAEYSKKN
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1333793 [H]