| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is gltP [H]
Identifier: 167622713
GI number: 167622713
Start: 960923
End: 962179
Strand: Direct
Name: gltP [H]
Synonym: Shal_0773
Alternate gene names: 167622713
Gene position: 960923-962179 (Clockwise)
Preceding gene: 167622712
Following gene: 167622716
Centisome position: 18.38
GC content: 48.05
Gene sequence:
>1257_bases ATGAAAAAATCACTTTCGACTCGGATCTTTATCGGTCTATTTTCAGGGCTAATTTTTGGCTCTATCATTCAATACTTCCT CGCAGACATTAGTTTTTTCTCTGGCACTATCGTTGACTTAGCCTCAGGCGCAGGCACCATGTTCGTTAATATGATCATGA TGTTAGTGGTACCTTTAGTTTTTGTTAGTATCGTTTGCGGCGTGAGTGAGCTTAAAGATCTCAACAGCTTCGGCCGCCTA GGCGGTAAAACATTCGGCTTTTACATCATCAACACCTTAGTGGCGATCTTCGCGGCATTGGGCGTGGCGTTATTGCTCGC TCCTGGTAAGGGCGTTGATATGTCTAGCGGTGGCGGTGTCGATATCGTCGCAACGGAGCTACCTAATCTTGTCGATTTGA TTGTGAGTATCGTACCGAGCAACCCGATTACCGCATTTGGCTCGGGTAACATGCTACAAGTTATCTTTATGGCACTGTTA CTCGGTGGCGTGATTAAATCTCTTGGTGAGGCGGCGCAAAGCGCGGTAAACGGCTTCCAAGTGGCAAACAAGATCATGAT GAAGCTGATAAGTGTAGTGATGCAGCTAGCGCCAATCGGTGTATTTGCACTGATGCTAAAGCTTGGTGCGACACTAGAGG CGGCGATATTTGGCAGCGTGGTTGAATACCTAGCGCTGATCTTAAGCCTATTATTACTGTGGATTTTTGTGGTCTACCCA TTCGCCGTTAGTCTATTTACTCCTATATCGGCAAAAGAGTTTCGCGCTAAGACTCGTGAGCAAATTTTGTTTTCACTGTC GACTGCTAGCTCAAATGCGACCATTCCAGTGACTATGCGCACCCTAACCGAGAAGCTCGGTGTTAATCGCTCTGTTGCAG GCTTTGGCGTACCGCTCGGCGCGACCATGAACATGGGCGGCGTATCGATTTATATCACTATCGCTATCTTCTTTGTGGCT AACGCATTTGGCGCGCCAATTCCGATGGAGCAGCTACCCGCATTGTTATTTAGTATTTTCTTACTGTCAGTCGGCGCTGG TGGCGTACCTGGCGGCGGCATGGTGATGATTGGTGTGCTTATCCATCAGATGGGGCTACCTATCGAAGCGTTCGCAATTG TGGCAGCCCTAGACCGCTTAATCGATATGGTGCTGACTTCTTGTAACGTCGTGGGTGACACTGCAGTACTGACTATTGTT GATGAAACAGAAAAGAGCGGCGACGCTAAGTTAGTCGCAGCGCAGGCTCAAGTATAA
Upstream 100 bases:
>100_bases GTTTCACTATCCTCGACACAAAGAGATGAAAACCTATAACTCATCAAAATTGAAGGCAATAGAAGGCATGCGCTAAGACA TGTCCCAATAAGGCAAGCAA
Downstream 100 bases:
>100_bases TCCGCTGTAGAGCCCTCTATTATTAAAGATAAAAAATGCCAGCAACTTGCTGGCATTTTTGTTTTCTGCTTCTTGTTTCT TTTCTTTAGTTTCTTATCTT
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKKSLSTRIFIGLFSGLIFGSIIQYFLADISFFSGTIVDLASGAGTMFVNMIMMLVVPLVFVSIVCGVSELKDLNSFGRL GGKTFGFYIINTLVAIFAALGVALLLAPGKGVDMSSGGGVDIVATELPNLVDLIVSIVPSNPITAFGSGNMLQVIFMALL LGGVIKSLGEAAQSAVNGFQVANKIMMKLISVVMQLAPIGVFALMLKLGATLEAAIFGSVVEYLALILSLLLLWIFVVYP FAVSLFTPISAKEFRAKTREQILFSLSTASSNATIPVTMRTLTEKLGVNRSVAGFGVPLGATMNMGGVSIYITIAIFFVA NAFGAPIPMEQLPALLFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPIEAFAIVAALDRLIDMVLTSCNVVGDTAVLTIV DETEKSGDAKLVAAQAQV
Sequences:
>Translated_418_residues MKKSLSTRIFIGLFSGLIFGSIIQYFLADISFFSGTIVDLASGAGTMFVNMIMMLVVPLVFVSIVCGVSELKDLNSFGRL GGKTFGFYIINTLVAIFAALGVALLLAPGKGVDMSSGGGVDIVATELPNLVDLIVSIVPSNPITAFGSGNMLQVIFMALL LGGVIKSLGEAAQSAVNGFQVANKIMMKLISVVMQLAPIGVFALMLKLGATLEAAIFGSVVEYLALILSLLLLWIFVVYP FAVSLFTPISAKEFRAKTREQILFSLSTASSNATIPVTMRTLTEKLGVNRSVAGFGVPLGATMNMGGVSIYITIAIFFVA NAFGAPIPMEQLPALLFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPIEAFAIVAALDRLIDMVLTSCNVVGDTAVLTIV DETEKSGDAKLVAAQAQV >Mature_418_residues MKKSLSTRIFIGLFSGLIFGSIIQYFLADISFFSGTIVDLASGAGTMFVNMIMMLVVPLVFVSIVCGVSELKDLNSFGRL GGKTFGFYIINTLVAIFAALGVALLLAPGKGVDMSSGGGVDIVATELPNLVDLIVSIVPSNPITAFGSGNMLQVIFMALL LGGVIKSLGEAAQSAVNGFQVANKIMMKLISVVMQLAPIGVFALMLKLGATLEAAIFGSVVEYLALILSLLLLWIFVVYP FAVSLFTPISAKEFRAKTREQILFSLSTASSNATIPVTMRTLTEKLGVNRSVAGFGVPLGATMNMGGVSIYITIAIFFVA NAFGAPIPMEQLPALLFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPIEAFAIVAALDRLIDMVLTSCNVVGDTAVLTIV DETEKSGDAKLVAAQAQV
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI40254478, Length=442, Percent_Identity=28.2805429864253, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI21314632, Length=432, Percent_Identity=26.1574074074074, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI169790839, Length=454, Percent_Identity=25.1101321585903, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI66773030, Length=399, Percent_Identity=26.3157894736842, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI5032093, Length=401, Percent_Identity=26.1845386533666, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI4827012, Length=271, Percent_Identity=29.1512915129151, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI223468564, Length=276, Percent_Identity=26.4492753623188, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI223468566, Length=276, Percent_Identity=26.4492753623188, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI194239697, Length=482, Percent_Identity=23.2365145228216, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI262359914, Length=381, Percent_Identity=24.9343832020997, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI301601644, Length=122, Percent_Identity=34.4262295081967, Blast_Score=83, Evalue=4e-16, Organism=Escherichia coli, GI1790514, Length=435, Percent_Identity=31.0344827586207, Blast_Score=181, Evalue=9e-47, Organism=Escherichia coli, GI1789947, Length=419, Percent_Identity=27.9236276849642, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1789473, Length=262, Percent_Identity=32.824427480916, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1788024, Length=431, Percent_Identity=29.0023201856148, Blast_Score=97, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71983106, Length=427, Percent_Identity=27.1662763466042, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI71983099, Length=427, Percent_Identity=27.1662763466042, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17537407, Length=384, Percent_Identity=27.8645833333333, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71996953, Length=420, Percent_Identity=26.9047619047619, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI193206505, Length=431, Percent_Identity=24.8259860788863, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI193206654, Length=428, Percent_Identity=27.5700934579439, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17541374, Length=394, Percent_Identity=25.6345177664975, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI24583025, Length=443, Percent_Identity=24.8306997742664, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI17137668, Length=443, Percent_Identity=24.8306997742664, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24583023, Length=443, Percent_Identity=24.8306997742664, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI281360481, Length=462, Percent_Identity=24.025974025974, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI281360483, Length=463, Percent_Identity=23.9740820734341, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI17137666, Length=463, Percent_Identity=23.9740820734341, Blast_Score=87, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43684; Mature: 43684
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLSTRIFIGLFSGLIFGSIIQYFLADISFFSGTIVDLASGAGTMFVNMIMMLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHH FVSIVCGVSELKDLNSFGRLGGKTFGFYIINTLVAIFAALGVALLLAPGKGVDMSSGGGV HHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE DIVATELPNLVDLIVSIVPSNPITAFGSGNMLQVIFMALLLGGVIKSLGEAAQSAVNGFQ EEEHHHCCHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VANKIMMKLISVVMQLAPIGVFALMLKLGATLEAAIFGSVVEYLALILSLLLLWIFVVYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVSLFTPISAKEFRAKTREQILFSLSTASSNATIPVTMRTLTEKLGVNRSVAGFGVPLG HHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCC ATMNMGGVSIYITIAIFFVANAFGAPIPMEQLPALLFSIFLLSVGAGGVPGGGMVMIGVL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IHQMGLPIEAFAIVAALDRLIDMVLTSCNVVGDTAVLTIVDETEKSGDAKLVAAQAQV HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEECCCCC >Mature Secondary Structure MKKSLSTRIFIGLFSGLIFGSIIQYFLADISFFSGTIVDLASGAGTMFVNMIMMLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHH FVSIVCGVSELKDLNSFGRLGGKTFGFYIINTLVAIFAALGVALLLAPGKGVDMSSGGGV HHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE DIVATELPNLVDLIVSIVPSNPITAFGSGNMLQVIFMALLLGGVIKSLGEAAQSAVNGFQ EEEHHHCCHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VANKIMMKLISVVMQLAPIGVFALMLKLGATLEAAIFGSVVEYLALILSLLLLWIFVVYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVSLFTPISAKEFRAKTREQILFSLSTASSNATIPVTMRTLTEKLGVNRSVAGFGVPLG HHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCC ATMNMGGVSIYITIAIFFVANAFGAPIPMEQLPALLFSIFLLSVGAGGVPGGGMVMIGVL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IHQMGLPIEAFAIVAALDRLIDMVLTSCNVVGDTAVLTIVDETEKSGDAKLVAAQAQV HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]