Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622674

Identifier: 167622674

GI number: 167622674

Start: 912757

End: 913473

Strand: Reverse

Name: 167622674

Synonym: Shal_0734

Alternate gene names: NA

Gene position: 913473-912757 (Counterclockwise)

Preceding gene: 167622675

Following gene: 167622673

Centisome position: 17.48

GC content: 41.14

Gene sequence:

>717_bases
ATGGACGATAAATTACAGCACCAATCGATACAGTATGATCTTCACCGCTTAGTGGTGTTGATGATTTTTATCGGTGCCTC
AATTGCAGCAACGGGCGTGTATTTATCCGTCTGGTTTGAATATCAAAATATAGGTATCGACGTCTTAAATCATCGCGCCG
ATTTTCTTGGAGACTACACCAAAACGCCCTATGCCTTTATCTACAATATGTCCTTAATGGTTGCAGGGCTTTGTACTTTA
CTATCGATGACAGGTTTATACCTGCTACGGCTCAGCTCCTTTAGTCGTTACTTGTCGCTTAGCGGCTCTGTAGTGGGTTT
ATCTATTGTCTTAATGGGTATGTTCCCCATTAATTACCTTGAAGTTCATCGATTAATATCGACTTGCTACCTCATCGGTA
CGGTAGTGATGTTTTTTCTCTGTATAAGCGACAAGTTTAGTCATAATTCAGTTTGTAGCTGGCCAGTATTCTTTTTAAGT
GTCCTAGGTTTTATCGCTGCATCTGGGCTGGTGCTTCAACTTAACTGGCACACCTTAGACTATACCCCTTGTATCAATCA
CACGATTAAACAGCATTACTGCTGGGTTGCTATTACTATGTGGACCCTGACCAATATCATCATGCTTTGGTGTCTTGCAT
TCGCTTGGAGCATACGTAATATTGCGATTAAAAATTACCTAGAACTGTCACAGCGCTACTTAGCTGGAGAGTATTAA

Upstream 100 bases:

>100_bases
ATAATTAGAGGAGTACATGTAGATGTGCTCCTTTTTTTATTGCTCATACACAGAGCATTGCTAAAACTAAAGAATAATAA
CTTAAATTGCGAAGGCAAAC

Downstream 100 bases:

>100_bases
GCCCCTCATGAGACTCGCAAAATACCTTGCCCTAACCGGCTGTTGCTCCCGTCGTGCGGCGACCCGCTTGATAAGAGACG
GCCAAGTTCGCATTAATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MDDKLQHQSIQYDLHRLVVLMIFIGASIAATGVYLSVWFEYQNIGIDVLNHRADFLGDYTKTPYAFIYNMSLMVAGLCTL
LSMTGLYLLRLSSFSRYLSLSGSVVGLSIVLMGMFPINYLEVHRLISTCYLIGTVVMFFLCISDKFSHNSVCSWPVFFLS
VLGFIAASGLVLQLNWHTLDYTPCINHTIKQHYCWVAITMWTLTNIIMLWCLAFAWSIRNIAIKNYLELSQRYLAGEY

Sequences:

>Translated_238_residues
MDDKLQHQSIQYDLHRLVVLMIFIGASIAATGVYLSVWFEYQNIGIDVLNHRADFLGDYTKTPYAFIYNMSLMVAGLCTL
LSMTGLYLLRLSSFSRYLSLSGSVVGLSIVLMGMFPINYLEVHRLISTCYLIGTVVMFFLCISDKFSHNSVCSWPVFFLS
VLGFIAASGLVLQLNWHTLDYTPCINHTIKQHYCWVAITMWTLTNIIMLWCLAFAWSIRNIAIKNYLELSQRYLAGEY
>Mature_238_residues
MDDKLQHQSIQYDLHRLVVLMIFIGASIAATGVYLSVWFEYQNIGIDVLNHRADFLGDYTKTPYAFIYNMSLMVAGLCTL
LSMTGLYLLRLSSFSRYLSLSGSVVGLSIVLMGMFPINYLEVHRLISTCYLIGTVVMFFLCISDKFSHNSVCSWPVFFLS
VLGFIAASGLVLQLNWHTLDYTPCINHTIKQHYCWVAITMWTLTNIIMLWCLAFAWSIRNIAIKNYLELSQRYLAGEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27243; Mature: 27243

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDKLQHQSIQYDLHRLVVLMIFIGASIAATGVYLSVWFEYQNIGIDVLNHRADFLGDYT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHCCHHHHHHHHHHHCCCC
KTPYAFIYNMSLMVAGLCTLLSMTGLYLLRLSSFSRYLSLSGSVVGLSIVLMGMFPINYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH
EVHRLISTCYLIGTVVMFFLCISDKFSHNSVCSWPVFFLSVLGFIAASGLVLQLNWHTLD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCEEC
YTPCINHTIKQHYCWVAITMWTLTNIIMLWCLAFAWSIRNIAIKNYLELSQRYLAGEY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDDKLQHQSIQYDLHRLVVLMIFIGASIAATGVYLSVWFEYQNIGIDVLNHRADFLGDYT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHCCHHHHHHHHHHHCCCC
KTPYAFIYNMSLMVAGLCTLLSMTGLYLLRLSSFSRYLSLSGSVVGLSIVLMGMFPINYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH
EVHRLISTCYLIGTVVMFFLCISDKFSHNSVCSWPVFFLSVLGFIAASGLVLQLNWHTLD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCEEC
YTPCINHTIKQHYCWVAITMWTLTNIIMLWCLAFAWSIRNIAIKNYLELSQRYLAGEY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA