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The map label for this gene is deoD [H]

Identifier: 167622666

GI number: 167622666

Start: 902749

End: 903459

Strand: Direct

Name: deoD [H]

Synonym: Shal_0726

Alternate gene names: 167622666

Gene position: 902749-903459 (Clockwise)

Preceding gene: 167622665

Following gene: 167622667

Centisome position: 17.27

GC content: 44.44

Gene sequence:

>711_bases
ATGACTCCACATATCAATGCCGCTGATGGCGCATTTGCTAAAACCGTATTAATGCCTGGCGATCCGCTAAGAGCTAAATA
CATTGCAGACAACTTTTTAGATAATGCAGTACTAGTGACTGATGTTCGTAATATGTTGGGTTATACCGGTGAATACAAAG
GCAAGAAGATCTCTGTAATGGGTTCAGGCATGGGGATCCCATCGATCTCAATTTATGCCAAAGAGCTAATCACCGAATAT
GGCGTTGAGAACATTATCCGCATTGGTTCATGTGGTGCGGTAAGTAACAATATTAAGTTGATGGATGTGGTAATGGCGAT
GGGCGCGAGCACAGATTCTGCCGTTAACAGAACCCGTTTTGCTAACACAGATTTTGCTATGATTGCCGATTTTAACTTGT
TGAAGCGTGCTGCAGACTCTGCTGAAAAGTTAGGTGCTAGCTACCATGTGGGTAACTTGTACTCTTCAGACCTGTTCTAT
AGCAGCGATGAGAACCGTTACGACTTGATGGAAAAGTACGGCATCTTAGGTGTCGAAATGGAAGCAGCAGGTCTTTATGG
TGTAGCGACCGAGTTTGGTGCTAACGCACTGGCTATGATGACGGTAACCGATCACCTTCGCCAAGGCTTACACCTAACGG
CCGAAGAGCGTCAGCAGACACTAAACGATATGATAAAGCTCACATTAGATGCTGTTGAAGATCTTCTTTAA

Upstream 100 bases:

>100_bases
AACTCGCTGGGTAAATAATGTGTTTGTTTATTAGTTTTTAGATGAAAAGTGCTTGCTTACATAGCGCAAGCAAGCACCTA
AATTTTTTGAGGAAAATATC

Downstream 100 bases:

>100_bases
TAAAGAATTCAGCTTGGCAAGATAGGCTGCGCGACTATTTACAAAGAAAAATAGAACAGCGTATCTCTTTACCCTCTGGC
CCGCGATTATGCACACTAAG

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTPHINAADGAFAKTVLMPGDPLRAKYIADNFLDNAVLVTDVRNMLGYTGEYKGKKISVMGSGMGIPSISIYAKELITEY
GVENIIRIGSCGAVSNNIKLMDVVMAMGASTDSAVNRTRFANTDFAMIADFNLLKRAADSAEKLGASYHVGNLYSSDLFY
SSDENRYDLMEKYGILGVEMEAAGLYGVATEFGANALAMMTVTDHLRQGLHLTAEERQQTLNDMIKLTLDAVEDLL

Sequences:

>Translated_236_residues
MTPHINAADGAFAKTVLMPGDPLRAKYIADNFLDNAVLVTDVRNMLGYTGEYKGKKISVMGSGMGIPSISIYAKELITEY
GVENIIRIGSCGAVSNNIKLMDVVMAMGASTDSAVNRTRFANTDFAMIADFNLLKRAADSAEKLGASYHVGNLYSSDLFY
SSDENRYDLMEKYGILGVEMEAAGLYGVATEFGANALAMMTVTDHLRQGLHLTAEERQQTLNDMIKLTLDAVEDLL
>Mature_235_residues
TPHINAADGAFAKTVLMPGDPLRAKYIADNFLDNAVLVTDVRNMLGYTGEYKGKKISVMGSGMGIPSISIYAKELITEYG
VENIIRIGSCGAVSNNIKLMDVVMAMGASTDSAVNRTRFANTDFAMIADFNLLKRAADSAEKLGASYHVGNLYSSDLFYS
SDENRYDLMEKYGILGVEMEAAGLYGVATEFGANALAMMTVTDHLRQGLHLTAEERQQTLNDMIKLTLDAVEDLL

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790844, Length=231, Percent_Identity=65.3679653679654, Blast_Score=315, Evalue=2e-87,
Organism=Escherichia coli, GI1790265, Length=239, Percent_Identity=31.7991631799163, Blast_Score=101, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 25635; Mature: 25503

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPHINAADGAFAKTVLMPGDPLRAKYIADNFLDNAVLVTDVRNMLGYTGEYKGKKISVM
CCCCCCCCCCCHHEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEEE
GSGMGIPSISIYAKELITEYGVENIIRIGSCGAVSNNIKLMDVVMAMGASTDSAVNRTRF
ECCCCCCHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHC
ANTDFAMIADFNLLKRAADSAEKLGASYHVGNLYSSDLFYSSDENRYDLMEKYGILGVEM
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCEECCCCEECCCCCHHHHHHHHCCEEEEE
EAAGLYGVATEFGANALAMMTVTDHLRQGLHLTAEERQQTLNDMIKLTLDAVEDLL
ECCCHHHHHHHHCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPHINAADGAFAKTVLMPGDPLRAKYIADNFLDNAVLVTDVRNMLGYTGEYKGKKISVM
CCCCCCCCCCHHEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEEE
GSGMGIPSISIYAKELITEYGVENIIRIGSCGAVSNNIKLMDVVMAMGASTDSAVNRTRF
ECCCCCCHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHC
ANTDFAMIADFNLLKRAADSAEKLGASYHVGNLYSSDLFYSSDENRYDLMEKYGILGVEM
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCEECCCCEECCCCCHHHHHHHHCCEEEEE
EAAGLYGVATEFGANALAMMTVTDHLRQGLHLTAEERQQTLNDMIKLTLDAVEDLL
ECCCHHHHHHHHCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA