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The map label for this gene is uspE [H]

Identifier: 167622651

GI number: 167622651

Start: 879892

End: 880776

Strand: Direct

Name: uspE [H]

Synonym: Shal_0711

Alternate gene names: 167622651

Gene position: 879892-880776 (Clockwise)

Preceding gene: 167622646

Following gene: 167622660

Centisome position: 16.83

GC content: 44.86

Gene sequence:

>885_bases
ATGGACAAAGTATTCATTATTTCCCAGAGAGAAGAGGCTCATGTCGATGCGATATCGGCAGGGGTTGAGCTTGCCAGAGA
GTTAGGAAAGCGCGCCGAAGTATTTGCTTATAGTTTTGAATACTTTGGTAATGCCGAATATTACAATCCCAAGTTTGTTG
CTGTTGCGCAAAAGCACGTGATGAAGCAACGCATGGCTAAGATTGAACTGGAGTTAGAGAGTATCGATGCCGCCGATACA
CCAATCCACAGTGTCTGGAGCAAAGATCTTTATGAGCATGCTTGTCATCATTCAGACCGCCATGGCTTCGATCTTATCGT
TAAAGCGGTGCACCATGCCGATCATTACTTACCTGTAGACTGGAATCTTATCCGTCACACCCGAGTGCCATTGATGCTAC
TGACCGATCATCCGGTACAGAAGAATAACACCGTGATGATGGCCTTAGATCTTGACAGTAAAAAAACTTTAAAGCAGCAA
CTAAATCAATCTGTTATTCGTCAAGCTATCGCGTTGGCTAAAGCGACTGGCTGCGAGCTACATCTTGCATTTGTGATCCG
ATTGCCTCAGGTGATCCATGATATGGAGATCGTCGATACCTATGCGATGATAAAAAAAGCTCGAGAAAAGCATCAAGCAT
TATTTGATAAGCTCAATATCGACCCTAAGTGTGTTCATATTACCGTTGGCGAACCCGATCTGTGTATCTATCAATTAGCT
TGCAAGCATAAGGTACGCTATTTAGTGCTTGGTGCGGTACAGCGTCAAGGAGTCTACGCCTTTGTGGTTGGCAATATGGC
AGAATCAATATTAAGTCGTATCCGCAGTAATGTGTTGGTTGTGCCTGCGCGCGAGGGGGTATTGCAGCCTCTAGGAGATA
GTTGA

Upstream 100 bases:

>100_bases
TTTTCATGTTTTGATCCGGATCGTTAATCGTATCGGTTTAACGGCACATAGGGACAAACTTGTCTAAGCTAGTATTAGGT
AGTAGTAACCGGAGAGTGCG

Downstream 100 bases:

>100_bases
TAGGAGATAGTTTACACCCATGCAATGGTTAGACAGTCTCGGGCAAAGTATCAGCGCTGTTTGATAAGCTCAATATCGAC
CCTAAGTGTGTTCATATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MDKVFIISQREEAHVDAISAGVELARELGKRAEVFAYSFEYFGNAEYYNPKFVAVAQKHVMKQRMAKIELELESIDAADT
PIHSVWSKDLYEHACHHSDRHGFDLIVKAVHHADHYLPVDWNLIRHTRVPLMLLTDHPVQKNNTVMMALDLDSKKTLKQQ
LNQSVIRQAIALAKATGCELHLAFVIRLPQVIHDMEIVDTYAMIKKAREKHQALFDKLNIDPKCVHITVGEPDLCIYQLA
CKHKVRYLVLGAVQRQGVYAFVVGNMAESILSRIRSNVLVVPAREGVLQPLGDS

Sequences:

>Translated_294_residues
MDKVFIISQREEAHVDAISAGVELARELGKRAEVFAYSFEYFGNAEYYNPKFVAVAQKHVMKQRMAKIELELESIDAADT
PIHSVWSKDLYEHACHHSDRHGFDLIVKAVHHADHYLPVDWNLIRHTRVPLMLLTDHPVQKNNTVMMALDLDSKKTLKQQ
LNQSVIRQAIALAKATGCELHLAFVIRLPQVIHDMEIVDTYAMIKKAREKHQALFDKLNIDPKCVHITVGEPDLCIYQLA
CKHKVRYLVLGAVQRQGVYAFVVGNMAESILSRIRSNVLVVPAREGVLQPLGDS
>Mature_294_residues
MDKVFIISQREEAHVDAISAGVELARELGKRAEVFAYSFEYFGNAEYYNPKFVAVAQKHVMKQRMAKIELELESIDAADT
PIHSVWSKDLYEHACHHSDRHGFDLIVKAVHHADHYLPVDWNLIRHTRVPLMLLTDHPVQKNNTVMMALDLDSKKTLKQQ
LNQSVIRQAIALAKATGCELHLAFVIRLPQVIHDMEIVDTYAMIKKAREKHQALFDKLNIDPKCVHITVGEPDLCIYQLA
CKHKVRYLVLGAVQRQGVYAFVVGNMAESILSRIRSNVLVVPAREGVLQPLGDS

Specific function: Required for resistance to DNA-damaging agents [H]

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1787594, Length=281, Percent_Identity=25.9786476868327, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 33375; Mature: 33375

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKVFIISQREEAHVDAISAGVELARELGKRAEVFAYSFEYFGNAEYYNPKFVAVAQKHV
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHEEEEEHHHCCCCCCCCCHHHHHHHHHH
MKQRMAKIELELESIDAADTPIHSVWSKDLYEHACHHSDRHGFDLIVKAVHHADHYLPVD
HHHHHHHHEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC
WNLIRHTRVPLMLLTDHPVQKNNTVMMALDLDSKKTLKQQLNQSVIRQAIALAKATGCEL
CHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
HLAFVIRLPQVIHDMEIVDTYAMIKKAREKHQALFDKLNIDPKCVHITVGEPDLCIYQLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH
CKHKVRYLVLGAVQRQGVYAFVVGNMAESILSRIRSNVLVVPAREGVLQPLGDS
HHHHHHHHEEEHHHHCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MDKVFIISQREEAHVDAISAGVELARELGKRAEVFAYSFEYFGNAEYYNPKFVAVAQKHV
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHEEEEEHHHCCCCCCCCCHHHHHHHHHH
MKQRMAKIELELESIDAADTPIHSVWSKDLYEHACHHSDRHGFDLIVKAVHHADHYLPVD
HHHHHHHHEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC
WNLIRHTRVPLMLLTDHPVQKNNTVMMALDLDSKKTLKQQLNQSVIRQAIALAKATGCEL
CHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
HLAFVIRLPQVIHDMEIVDTYAMIKKAREKHQALFDKLNIDPKCVHITVGEPDLCIYQLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH
CKHKVRYLVLGAVQRQGVYAFVVGNMAESILSRIRSNVLVVPAREGVLQPLGDS
HHHHHHHHEEEHHHHCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]