| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is kefC [H]
Identifier: 167622609
GI number: 167622609
Start: 825187
End: 826953
Strand: Reverse
Name: kefC [H]
Synonym: Shal_0669
Alternate gene names: 167622609
Gene position: 826953-825187 (Counterclockwise)
Preceding gene: 167622610
Following gene: 167622608
Centisome position: 15.82
GC content: 44.77
Gene sequence:
>1767_bases ATGGAACCCGCTATACTCATTATCACCTTAGCCTGCGGTATGTTAGTTAGCCGCGTGGGACTGCCCCCCTTAATTGGCTA TCTTGTTGCGGGATTTGTGCTGTTTTTGTTCGGTATTGAAGAGTCCAGTTTGCCTATGCTGGAGCAACTTGCCAACCTAG GTGTCACGCTACTGCTCTTTGCCATTGGTCTTAAATTAGATCTGCGCAGCTTATTTAAAGCAGAGGTTTGGGCAGGCTCC AGCCTTCATTTAATCGGTTCAATGCTCTTTTTTATCCCACTGCTGAAACTGCTGGGTATATTAGGGCTTGAACAGCTCAC TGGCCTAGAGATAGATCAGCTAGCGCTACTTGCCTTTGCATTGAGTTTTTCCAGTACGATTTTTGCGGTAAAAATACTGG AAGATAAAGGTGATATGCAGTCACTTTATGGCCGAGTCGCTATTGGTATCTTGATTATGCAAGATATCTTCGCCGTTGCT TTCTTAACTATCTCTAAGGGCGATATTCCCTCATATTGGGCACTAGGCTTACTGTTACTGCCGCTAGCAAAGCCTCTCAT ATATAAAGCCTTCGATCGCGTTGGCCACGGTGAACTGCTAGTGCTATTTGGCTTAGTGATGGCACTCGTGATGGGAGCGG GCCTATTTGAGCTCGTCGGTTTAAAGCCTGATCTTGGTGCGCTAGTCATAGGTATTTTACTGGCGGGGCACCCTAAATCA TCAGAGCTGGCTAAATCACTGTTTTACTTTAAAGAGCTATTCTTAGTCGCCTTCTTCTTAACCGTTGGCCTCAATGGCTT ACCCACCTTCTCCGATATCGGCTTAGCTGCGATTTTAGTACTAATAGTACCGATTAAAGTCATTCTATTTATGTACTTGT TAACTCACTTTAAGCTGCGTTCTCGTACCGCATTAATGAGCTCGTTTAGCTTAGGTAATTACAGCGAATTTGGCTTAATC GTTGCGGCAGTTGCGACCTCAAAAGGTTGGCTTCCACCACAATGGATGGTTATTCTCGCTGTTGCACTCAGCTTTAGCTT CCTGTTTGCCGCGCCGCTCAATACCGCATCTAATCGTTTATATCAGAAATTTCAAAGCAGACTCAAGCGACTAGAGAAAC CCCCTCTGCACCCAGAAGATAGGCCTATACCTGTAGGCAACCCACGCTTTTTAATCTTAGGTATGGGCCGTATTGGTTCT GGTGCTTATGATGAGCTTAGAGCCCGTTATGATGGTGAGATTTTAGGTATTGAACATAAGCAAGAATTAGTGGATTTCCA TATAAAGGAAGGCCGAAACGTGGTGCAAGGTGACGCCTCCGATACCGATTTTTGGGAAAAGCTCGATAGAGCCCCTAACC TCGAATTGGTGTTGCTGACCATGCCTCACCACGTGGGTAATCAATTTGCGGTTGAACAACTTAAGCTACTGGATTACCAA GGAAAGCTCAGCGCCATCGTTAAATTTAAAGAAGATGCTCAATCACTTAGCGAGTCAGGGGTGCATAGTGTCTATAACCT CTATGAGGCTGCAGGTGCAGGTTTGGTTGAACATTTAGTCAAAGAGTTGCTAGCCCCAAGTGGTACCGCACCAGATAACC CCAATGCAATTAACCATCAAAATGAAGCTAAAATTCCTGCAGACACTGATGTTATCAAGCATCAAACTGAAGCTAAAACT CCTGCAGATACTGATGTGAGCAAGCAGAAAAAACAAGCAGATAACACCGATACTGCAAATGTTACCAAGCATCAAAATGA AGCTTGA
Upstream 100 bases:
>100_bases ATTTAATCACAATTTTCAGTTCAACTTCATAAATTTCTTATACAATGGTGCATCACTATACCCTGGAACCTGGGTATCTA TTTTATTGAAAAGGAGCATC
Downstream 100 bases:
>100_bases ACGGTTGATATCTCGCAAAAAAGCTGATTGTATACATTATTCGCTTTATAGCGTATGTTATTTGTCATCGAGTATAAGAT GACCAATAACATCCAATGCC
Product: sodium/hydrogen exchanger
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 588; Mature: 588
Protein sequence:
>588_residues MEPAILIITLACGMLVSRVGLPPLIGYLVAGFVLFLFGIEESSLPMLEQLANLGVTLLLFAIGLKLDLRSLFKAEVWAGS SLHLIGSMLFFIPLLKLLGILGLEQLTGLEIDQLALLAFALSFSSTIFAVKILEDKGDMQSLYGRVAIGILIMQDIFAVA FLTISKGDIPSYWALGLLLLPLAKPLIYKAFDRVGHGELLVLFGLVMALVMGAGLFELVGLKPDLGALVIGILLAGHPKS SELAKSLFYFKELFLVAFFLTVGLNGLPTFSDIGLAAILVLIVPIKVILFMYLLTHFKLRSRTALMSSFSLGNYSEFGLI VAAVATSKGWLPPQWMVILAVALSFSFLFAAPLNTASNRLYQKFQSRLKRLEKPPLHPEDRPIPVGNPRFLILGMGRIGS GAYDELRARYDGEILGIEHKQELVDFHIKEGRNVVQGDASDTDFWEKLDRAPNLELVLLTMPHHVGNQFAVEQLKLLDYQ GKLSAIVKFKEDAQSLSESGVHSVYNLYEAAGAGLVEHLVKELLAPSGTAPDNPNAINHQNEAKIPADTDVIKHQTEAKT PADTDVSKQKKQADNTDTANVTKHQNEA
Sequences:
>Translated_588_residues MEPAILIITLACGMLVSRVGLPPLIGYLVAGFVLFLFGIEESSLPMLEQLANLGVTLLLFAIGLKLDLRSLFKAEVWAGS SLHLIGSMLFFIPLLKLLGILGLEQLTGLEIDQLALLAFALSFSSTIFAVKILEDKGDMQSLYGRVAIGILIMQDIFAVA FLTISKGDIPSYWALGLLLLPLAKPLIYKAFDRVGHGELLVLFGLVMALVMGAGLFELVGLKPDLGALVIGILLAGHPKS SELAKSLFYFKELFLVAFFLTVGLNGLPTFSDIGLAAILVLIVPIKVILFMYLLTHFKLRSRTALMSSFSLGNYSEFGLI VAAVATSKGWLPPQWMVILAVALSFSFLFAAPLNTASNRLYQKFQSRLKRLEKPPLHPEDRPIPVGNPRFLILGMGRIGS GAYDELRARYDGEILGIEHKQELVDFHIKEGRNVVQGDASDTDFWEKLDRAPNLELVLLTMPHHVGNQFAVEQLKLLDYQ GKLSAIVKFKEDAQSLSESGVHSVYNLYEAAGAGLVEHLVKELLAPSGTAPDNPNAINHQNEAKIPADTDVIKHQTEAKT PADTDVSKQKKQADNTDTANVTKHQNEA >Mature_588_residues MEPAILIITLACGMLVSRVGLPPLIGYLVAGFVLFLFGIEESSLPMLEQLANLGVTLLLFAIGLKLDLRSLFKAEVWAGS SLHLIGSMLFFIPLLKLLGILGLEQLTGLEIDQLALLAFALSFSSTIFAVKILEDKGDMQSLYGRVAIGILIMQDIFAVA FLTISKGDIPSYWALGLLLLPLAKPLIYKAFDRVGHGELLVLFGLVMALVMGAGLFELVGLKPDLGALVIGILLAGHPKS SELAKSLFYFKELFLVAFFLTVGLNGLPTFSDIGLAAILVLIVPIKVILFMYLLTHFKLRSRTALMSSFSLGNYSEFGLI VAAVATSKGWLPPQWMVILAVALSFSFLFAAPLNTASNRLYQKFQSRLKRLEKPPLHPEDRPIPVGNPRFLILGMGRIGS GAYDELRARYDGEILGIEHKQELVDFHIKEGRNVVQGDASDTDFWEKLDRAPNLELVLLTMPHHVGNQFAVEQLKLLDYQ GKLSAIVKFKEDAQSLSESGVHSVYNLYEAAGAGLVEHLVKELLAPSGTAPDNPNAINHQNEAKIPADTDVIKHQTEAKT PADTDVSKQKKQADNTDTANVTKHQNEA
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG4651
COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1786232, Length=454, Percent_Identity=27.0925110132159, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1786685, Length=542, Percent_Identity=26.5682656826568, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1789749, Length=447, Percent_Identity=25.7270693512304, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR006036 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 64220; Mature: 64220
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPAILIITLACGMLVSRVGLPPLIGYLVAGFVLFLFGIEESSLPMLEQLANLGVTLLLF CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHH AIGLKLDLRSLFKAEVWAGSSLHLIGSMLFFIPLLKLLGILGLEQLTGLEIDQLALLAFA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LSFSSTIFAVKILEDKGDMQSLYGRVAIGILIMQDIFAVAFLTISKGDIPSYWALGLLLL HHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH PLAKPLIYKAFDRVGHGELLVLFGLVMALVMGAGLFELVGLKPDLGALVIGILLAGHPKS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCH SELAKSLFYFKELFLVAFFLTVGLNGLPTFSDIGLAAILVLIVPIKVILFMYLLTHFKLR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRTALMSSFSLGNYSEFGLIVAAVATSKGWLPPQWMVILAVALSFSFLFAAPLNTASNRL HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH YQKFQSRLKRLEKPPLHPEDRPIPVGNPRFLILGMGRIGSGAYDELRARYDGEILGIEHK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEECCHHH QELVDFHIKEGRNVVQGDASDTDFWEKLDRAPNLELVLLTMPHHVGNQFAVEQLKLLDYQ HHHHHHHHHCCCCEECCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCC GKLSAIVKFKEDAQSLSESGVHSVYNLYEAAGAGLVEHLVKELLAPSGTAPDNPNAINHQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC NEAKIPADTDVIKHQTEAKTPADTDVSKQKKQADNTDTANVTKHQNEA CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MEPAILIITLACGMLVSRVGLPPLIGYLVAGFVLFLFGIEESSLPMLEQLANLGVTLLLF CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHH AIGLKLDLRSLFKAEVWAGSSLHLIGSMLFFIPLLKLLGILGLEQLTGLEIDQLALLAFA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LSFSSTIFAVKILEDKGDMQSLYGRVAIGILIMQDIFAVAFLTISKGDIPSYWALGLLLL HHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH PLAKPLIYKAFDRVGHGELLVLFGLVMALVMGAGLFELVGLKPDLGALVIGILLAGHPKS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCH SELAKSLFYFKELFLVAFFLTVGLNGLPTFSDIGLAAILVLIVPIKVILFMYLLTHFKLR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRTALMSSFSLGNYSEFGLIVAAVATSKGWLPPQWMVILAVALSFSFLFAAPLNTASNRL HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH YQKFQSRLKRLEKPPLHPEDRPIPVGNPRFLILGMGRIGSGAYDELRARYDGEILGIEHK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEECCHHH QELVDFHIKEGRNVVQGDASDTDFWEKLDRAPNLELVLLTMPHHVGNQFAVEQLKLLDYQ HHHHHHHHHCCCCEECCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCC GKLSAIVKFKEDAQSLSESGVHSVYNLYEAAGAGLVEHLVKELLAPSGTAPDNPNAINHQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC NEAKIPADTDVIKHQTEAKTPADTDVSKQKKQADNTDTANVTKHQNEA CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA