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The map label for this gene is yqeB [H]

Identifier: 167622585

GI number: 167622585

Start: 785615

End: 787207

Strand: Reverse

Name: yqeB [H]

Synonym: Shal_0645

Alternate gene names: 167622585

Gene position: 787207-785615 (Counterclockwise)

Preceding gene: 167622586

Following gene: 167622581

Centisome position: 15.06

GC content: 48.78

Gene sequence:

>1593_bases
ATGAATATTTTTGCCCACGCGGCCCAATTAGAAGAACTTAATACTCCTTTCGCCCTCACCAATATTCTCGAAACATCTGG
TTCAGCCCCCAGACACCAAGGTCAGATGATCGTTAAATTAGATGGCAGCATCATCGGCACCGTCGGCGGCGGCATGATTG
AGCGCTACGTCATCGAGCAAGCCATCGAAGCCATCAAGCAAAGAGAACCCAGAGTCGTCAAGGGACGCATGACTCGCACA
GGTCCCGATGCCATGGGAATGGATTGTGGCGGCTCGATGACTGTGCATATTGATGTATTTGGTTTAAGAGCGCCATTAGT
CCTTATCGGCGCAGGTCATGTTAATCGCGCTGTAGCTAAAGCGGCTCATGTATTAGGATTTGATATTACCGTAGCGGACG
CCTTTGCCGATAGTCTAGCTGAGGAACACTTTCCTCAGGGCAGCAAGCTCATCCTTGGCAACACCATGGAAGAGGCTATC
GATAAACTCACTATTAATAGTGCAAGCTATGTGGTTATCGCGACTAACCATCAAGATAAAGACGCTATCTCTAAAGTCGT
TAAACAAGATGCCAAGTATATCGGTCTAATGGCCAGTAAACGTAAGGTACAAACCCTGTTTACCCACCTTAGAAATATAG
GCATAAGTGACGAGCGCATCGCTAATGTTTACTCTCCCATCGGCTTTAGTATCGGCGCCGAGACACCTGAAGAGATTGCC
ATTAGCATCATGGCTGAAATATTAAAGGTGAAAAACAGTGCGGCTGGTGGCTTGATGAAGGACGACACGCGGATCAATCG
CAAGCGCCTAGTGCTCATACGGGGGGCTGGCGATATCGCCACTGGCGTTGCGATTCGATTGCATAATTCAGGCTTTAAGG
TCGTCATGACCGATATTGCCAAACCCAGCGTGATCCGCCGCAGCGTGGCCTTTGCCCAGTGTTTATTCGACTACAGTGTT
ACAGTTGAAGGCATTACAGCTAAAAAAGCAGATTGCAGCAACTCCGTCTATAAACTTATCGATCAGGGGATGATCCCCGT
ATTGGTAGATGAACAATGCACCAGCGCGGCAAAATTACACCCAAGCTTTGTCGTCGATGCCATATTGGCCAAGCGTAACT
TAGGCACATCGAAAGAGCTGGCTCCACACACTGTCGCCCTAGGCCCAGGTTTTATGGCCGGTGTCGATTGTGACGCTGTA
ATCGAGACTAACCGAGGCCATCATTTAGGCCGCATCATCTATCAAGGTGAAACTGCGCCTAATACAGGTGTTCCCGGAAA
TATTGGTGGCTACACCCATCAGAGAGTATTAAGGGCGCCCCATGCAGGCGTTATGCATTGCCATGTCAAACTCGGCGATA
TCGTAAAAGAGGGCGATCTTATCGCTCAAATTAACGATACCCCCATCAATGCGCCGCTCTCTGGAAAAGTCAGAGGTTTA
CTCAATGACGAGTTAGAAGTATATGAAGGATTAAAGATTGGTGATATCGACCCAAGAGGTGAGGACGCCGATCACCTTAG
TGTCTCCGATAAGGCCCGCGCCATTGGAGGCAGCGTGTTAGAAGCCCTACTGCAACTAGAAATGCAAAGTTAG

Upstream 100 bases:

>100_bases
GAATGCTTGATTCAGTGGGAATTTATAGGTCGCTTGGGGATAGATCACTAACACAAATGAGAAAGCGAGCTAACCGCTTT
CAATGGTACAAGGTAGATTT

Downstream 100 bases:

>100_bases
TACTCACTACTACTTCATACTTAAGCATTCCAGCAAAAACCGATGAGCCAGAAGATAAACTTCTGGCTCATCTTTTTTTT
ATAGCTTAACCATCTGTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MNIFAHAAQLEELNTPFALTNILETSGSAPRHQGQMIVKLDGSIIGTVGGGMIERYVIEQAIEAIKQREPRVVKGRMTRT
GPDAMGMDCGGSMTVHIDVFGLRAPLVLIGAGHVNRAVAKAAHVLGFDITVADAFADSLAEEHFPQGSKLILGNTMEEAI
DKLTINSASYVVIATNHQDKDAISKVVKQDAKYIGLMASKRKVQTLFTHLRNIGISDERIANVYSPIGFSIGAETPEEIA
ISIMAEILKVKNSAAGGLMKDDTRINRKRLVLIRGAGDIATGVAIRLHNSGFKVVMTDIAKPSVIRRSVAFAQCLFDYSV
TVEGITAKKADCSNSVYKLIDQGMIPVLVDEQCTSAAKLHPSFVVDAILAKRNLGTSKELAPHTVALGPGFMAGVDCDAV
IETNRGHHLGRIIYQGETAPNTGVPGNIGGYTHQRVLRAPHAGVMHCHVKLGDIVKEGDLIAQINDTPINAPLSGKVRGL
LNDELEVYEGLKIGDIDPRGEDADHLSVSDKARAIGGSVLEALLQLEMQS

Sequences:

>Translated_530_residues
MNIFAHAAQLEELNTPFALTNILETSGSAPRHQGQMIVKLDGSIIGTVGGGMIERYVIEQAIEAIKQREPRVVKGRMTRT
GPDAMGMDCGGSMTVHIDVFGLRAPLVLIGAGHVNRAVAKAAHVLGFDITVADAFADSLAEEHFPQGSKLILGNTMEEAI
DKLTINSASYVVIATNHQDKDAISKVVKQDAKYIGLMASKRKVQTLFTHLRNIGISDERIANVYSPIGFSIGAETPEEIA
ISIMAEILKVKNSAAGGLMKDDTRINRKRLVLIRGAGDIATGVAIRLHNSGFKVVMTDIAKPSVIRRSVAFAQCLFDYSV
TVEGITAKKADCSNSVYKLIDQGMIPVLVDEQCTSAAKLHPSFVVDAILAKRNLGTSKELAPHTVALGPGFMAGVDCDAV
IETNRGHHLGRIIYQGETAPNTGVPGNIGGYTHQRVLRAPHAGVMHCHVKLGDIVKEGDLIAQINDTPINAPLSGKVRGL
LNDELEVYEGLKIGDIDPRGEDADHLSVSDKARAIGGSVLEALLQLEMQS
>Mature_530_residues
MNIFAHAAQLEELNTPFALTNILETSGSAPRHQGQMIVKLDGSIIGTVGGGMIERYVIEQAIEAIKQREPRVVKGRMTRT
GPDAMGMDCGGSMTVHIDVFGLRAPLVLIGAGHVNRAVAKAAHVLGFDITVADAFADSLAEEHFPQGSKLILGNTMEEAI
DKLTINSASYVVIATNHQDKDAISKVVKQDAKYIGLMASKRKVQTLFTHLRNIGISDERIANVYSPIGFSIGAETPEEIA
ISIMAEILKVKNSAAGGLMKDDTRINRKRLVLIRGAGDIATGVAIRLHNSGFKVVMTDIAKPSVIRRSVAFAQCLFDYSV
TVEGITAKKADCSNSVYKLIDQGMIPVLVDEQCTSAAKLHPSFVVDAILAKRNLGTSKELAPHTVALGPGFMAGVDCDAV
IETNRGHHLGRIIYQGETAPNTGVPGNIGGYTHQRVLRAPHAGVMHCHVKLGDIVKEGDLIAQINDTPINAPLSGKVRGL
LNDELEVYEGLKIGDIDPRGEDADHLSVSDKARAIGGSVLEALLQLEMQS

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=529, Percent_Identity=57.65595463138, Blast_Score=629, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 56702; Mature: 56702

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFAHAAQLEELNTPFALTNILETSGSAPRHQGQMIVKLDGSIIGTVGGGMIERYVIEQ
CCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEECCEEEECCCCHHHHHHHHHH
AIEAIKQREPRVVKGRMTRTGPDAMGMDCGGSMTVHIDVFGLRAPLVLIGAGHVNRAVAK
HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCHHHHHHHH
AAHVLGFDITVADAFADSLAEEHFPQGSKLILGNTMEEAIDKLTINSASYVVIATNHQDK
HHHHHEEEEEHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHEEECCCEEEEEEECCCCH
DAISKVVKQDAKYIGLMASKRKVQTLFTHLRNIGISDERIANVYSPIGFSIGAETPEEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHH
ISIMAEILKVKNSAAGGLMKDDTRINRKRLVLIRGAGDIATGVAIRLHNSGFKVVMTDIA
HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEECCC
KPSVIRRSVAFAQCLFDYSVTVEGITAKKADCSNSVYKLIDQGMIPVLVDEQCTSAAKLH
CCHHHHHHHHHHHHHHHCEEEEECEEECCCCCCHHHHHHHHCCCCEEEECCHHHHHHHCC
PSFVVDAILAKRNLGTSKELAPHTVALGPGFMAGVDCDAVIETNRGHHLGRIIYQGETAP
HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEECCCCCEEEECCCCCEEEEEEEECCCCC
NTGVPGNIGGYTHQRVLRAPHAGVMHCHVKLGDIVKEGDLIAQINDTPINAPLSGKVRGL
CCCCCCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHCCCCEEEEECCCCCCCCCCCCCHHH
LNDELEVYEGLKIGDIDPRGEDADHLSVSDKARAIGGSVLEALLQLEMQS
CCCCHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIFAHAAQLEELNTPFALTNILETSGSAPRHQGQMIVKLDGSIIGTVGGGMIERYVIEQ
CCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEECCEEEECCCCHHHHHHHHHH
AIEAIKQREPRVVKGRMTRTGPDAMGMDCGGSMTVHIDVFGLRAPLVLIGAGHVNRAVAK
HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCHHHHHHHH
AAHVLGFDITVADAFADSLAEEHFPQGSKLILGNTMEEAIDKLTINSASYVVIATNHQDK
HHHHHEEEEEHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHEEECCCEEEEEEECCCCH
DAISKVVKQDAKYIGLMASKRKVQTLFTHLRNIGISDERIANVYSPIGFSIGAETPEEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHH
ISIMAEILKVKNSAAGGLMKDDTRINRKRLVLIRGAGDIATGVAIRLHNSGFKVVMTDIA
HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEECCC
KPSVIRRSVAFAQCLFDYSVTVEGITAKKADCSNSVYKLIDQGMIPVLVDEQCTSAAKLH
CCHHHHHHHHHHHHHHHCEEEEECEEECCCCCCHHHHHHHHCCCCEEEECCHHHHHHHCC
PSFVVDAILAKRNLGTSKELAPHTVALGPGFMAGVDCDAVIETNRGHHLGRIIYQGETAP
HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEECCCCCEEEECCCCCEEEEEEEECCCCC
NTGVPGNIGGYTHQRVLRAPHAGVMHCHVKLGDIVKEGDLIAQINDTPINAPLSGKVRGL
CCCCCCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHCCCCEEEEECCCCCCCCCCCCCHHH
LNDELEVYEGLKIGDIDPRGEDADHLSVSDKARAIGGSVLEALLQLEMQS
CCCCHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]