| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622566
Identifier: 167622566
GI number: 167622566
Start: 755177
End: 755440
Strand: Direct
Name: 167622566
Synonym: Shal_0626
Alternate gene names: NA
Gene position: 755177-755440 (Clockwise)
Preceding gene: 167622565
Following gene: 167622567
Centisome position: 14.45
GC content: 47.73
Gene sequence:
>264_bases ATGGGTCAGCAAGCTATGCGCCATAACGCTAACCATTGCCCCTTGTGTCAGGGCCTTAATCATTGTGCAGCGCAATCTGG CACGGGTATAGAACAGTGTTGGTGCAGTAAACAAGAGTTTCCAGACAAGAGCCTATTAGTGAGTGTTTTAGAGGCGAATG AACTGGTTGGTCTGAATGGAACTGCTTGTATTTGTGAGGCTTGTTTGCAGCGACTGCGGCAGTTGCAGGTCAAAGGTCGC ACGCTTTATAAGAGAATCGATTAG
Upstream 100 bases:
>100_bases GGCTTGTATTGAGGGAGTTAACCCTTATGATCTTGGCGAGATCCCAGTGATGGATGGTATTAACCACCCTGCAGACCGCT ACGATAGTGAGTTTAATTGA
Downstream 100 bases:
>100_bases CCTACTAGACCTAAAGCGACCGATAGGGCAAAATCGCCGATCTTGTTATTTCTTCAATGGCCATATTCATGGATCCGCGC GCTCAATGCTCCGAGTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MGQQAMRHNANHCPLCQGLNHCAAQSGTGIEQCWCSKQEFPDKSLLVSVLEANELVGLNGTACICEACLQRLRQLQVKGR TLYKRID
Sequences:
>Translated_87_residues MGQQAMRHNANHCPLCQGLNHCAAQSGTGIEQCWCSKQEFPDKSLLVSVLEANELVGLNGTACICEACLQRLRQLQVKGR TLYKRID >Mature_86_residues GQQAMRHNANHCPLCQGLNHCAAQSGTGIEQCWCSKQEFPDKSLLVSVLEANELVGLNGTACICEACLQRLRQLQVKGRT LYKRID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9630; Mature: 9499
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 9.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 10.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQQAMRHNANHCPLCQGLNHCAAQSGTGIEQCWCSKQEFPDKSLLVSVLEANELVGLNG CCCCCHHCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC TACICEACLQRLRQLQVKGRTLYKRID HHHHHHHHHHHHHHHHHCCHHHHHHCC >Mature Secondary Structure GQQAMRHNANHCPLCQGLNHCAAQSGTGIEQCWCSKQEFPDKSLLVSVLEANELVGLNG CCCCHHCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC TACICEACLQRLRQLQVKGRTLYKRID HHHHHHHHHHHHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA