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The map label for this gene is 167622450

Identifier: 167622450

GI number: 167622450

Start: 613638

End: 615047

Strand: Direct

Name: 167622450

Synonym: Shal_0510

Alternate gene names: NA

Gene position: 613638-615047 (Clockwise)

Preceding gene: 167622449

Following gene: 167622451

Centisome position: 11.74

GC content: 37.23

Gene sequence:

>1410_bases
ATGTTTCACCCTTTAGTCATCAGAACAACCATACATATTGAAGAAAAAAATGAAATAAGACTGCCTGTTATTTACACGCA
AAATGGGGTTTTAAAATCATATCTAGATTATTCAATCTATAAACGAAATAAGAGCATGTCTTGGATTGATGCGAGTGCTC
GAGCAGTTTGCTTACTTGTCGAATTTGTAGAATTCAATAGCACGTATTTCAAATATCCTGCAGACCTTTTCTCAGCCTTT
TCAGACAAACTATTCTCAGGAACAATCAATCAAAATGGTGAAGATCCAACGGGACTCCGATGGAGAAAGCGAAGTATACA
AAATGGCAATAAAATCATTTCGTATGTGACTCAATACTCTGATTGGCTTTGCGACCATAAAGAACTTAACAACAAAGACA
ACCTTAATCCTTGGCGTGAAGCTACAAGCCATGAAGAACGATTAAATTGGGCAGCATATTCACATAAACATAAAAATGCT
TTTCTAGCGCACACATGGTCAAAAAAAACAGCGCAAGATAGAAACAAATCATCTAGAAATGTTAGATACCAGCAAGATCA
TAGGGCCAATGATAATAACTCTGCTTTGAACAGATTCCCTGATGAGTATATTGACGACTTAATTCATAAAGGGTTTGTAA
AGCCTGGTGTTTTGGCTACCGCCCCTGCTTATACCCGCCTTGAATTAAGGGACATACTCATCACTATGTTACTTCACTTT
GGCGGGTTAAGAAGATCGGAGCCTTTTCATTTATGGCTCGAGGATATAGAACTACATCCTGAAAATTCAAATGAAGCTTT
AGTATTGGTATACGAACCTGAAATCGGACAGTCTCCCGTGTCGTATACCAATGGGCGCATTGAGGTTCGTGAAGAAACAC
TAGCTAAAAACTTCCAACTCTTGCCCCGAAACAAATATGAAAAAAGTAAAAAGGTTTATGCAGGTTGGAAGAATAATAAA
TTATCCCCATCAAAAAAAAATTATATGGTTGTGAATTGGTTTGAACCATCAGCTGGCGAACAGTTTTTATTTTATTGGCG
TTTGTATTTATCTAAACAAAGGGTTAGTCCACATAAAAATCGCAAGCATCCATATGCATTTACTAATCAATTTGGTGACC
CTTACTCGATAGATGCTTTTGAACGAAAATACAAAAAAGCAATTGAACGGGTTGGGCTTGTTTTTGAGAAAGATTTAGGG
ACAACGCCACATGGCCACCGATATGCTTATATAAATCGTCTAGAAAAAGCTGGTGTAGGTAACCTGTTCGTAGCCAACGC
AGTACATCACAAATCGATAAAGTCTCAAGACTCTTATAAATCGCTATCGCCAAAAGAGATACGCTCCGAGTTCAAATGCT
TAGAAAGCAAAACTAAAAGAATATTAGAGTTAAGGAGTGCTTATGAGTAA

Upstream 100 bases:

>100_bases
TATCCTTTTTAAACGATTATCTTGATTTTGATCAAGGTTAATACCTTGCTTGTTTTAGTATGCCCCCCTAAAGTGTAATT
AATATTATATAGGGGCTCTT

Downstream 100 bases:

>100_bases
ATACACCACGATTGAAGAGGCTTCAAAAGCCGCCATCAAGCTCGGTATTAAAAGGCGATCTGAGTACATGAAACGCTATA
AGGAAGACCCTAGGCTGCCT

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase; Integrase Family Protein; Site-Specific Recombinase; DNA Integration Protein; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MFHPLVIRTTIHIEEKNEIRLPVIYTQNGVLKSYLDYSIYKRNKSMSWIDASARAVCLLVEFVEFNSTYFKYPADLFSAF
SDKLFSGTINQNGEDPTGLRWRKRSIQNGNKIISYVTQYSDWLCDHKELNNKDNLNPWREATSHEERLNWAAYSHKHKNA
FLAHTWSKKTAQDRNKSSRNVRYQQDHRANDNNSALNRFPDEYIDDLIHKGFVKPGVLATAPAYTRLELRDILITMLLHF
GGLRRSEPFHLWLEDIELHPENSNEALVLVYEPEIGQSPVSYTNGRIEVREETLAKNFQLLPRNKYEKSKKVYAGWKNNK
LSPSKKNYMVVNWFEPSAGEQFLFYWRLYLSKQRVSPHKNRKHPYAFTNQFGDPYSIDAFERKYKKAIERVGLVFEKDLG
TTPHGHRYAYINRLEKAGVGNLFVANAVHHKSIKSQDSYKSLSPKEIRSEFKCLESKTKRILELRSAYE

Sequences:

>Translated_469_residues
MFHPLVIRTTIHIEEKNEIRLPVIYTQNGVLKSYLDYSIYKRNKSMSWIDASARAVCLLVEFVEFNSTYFKYPADLFSAF
SDKLFSGTINQNGEDPTGLRWRKRSIQNGNKIISYVTQYSDWLCDHKELNNKDNLNPWREATSHEERLNWAAYSHKHKNA
FLAHTWSKKTAQDRNKSSRNVRYQQDHRANDNNSALNRFPDEYIDDLIHKGFVKPGVLATAPAYTRLELRDILITMLLHF
GGLRRSEPFHLWLEDIELHPENSNEALVLVYEPEIGQSPVSYTNGRIEVREETLAKNFQLLPRNKYEKSKKVYAGWKNNK
LSPSKKNYMVVNWFEPSAGEQFLFYWRLYLSKQRVSPHKNRKHPYAFTNQFGDPYSIDAFERKYKKAIERVGLVFEKDLG
TTPHGHRYAYINRLEKAGVGNLFVANAVHHKSIKSQDSYKSLSPKEIRSEFKCLESKTKRILELRSAYE
>Mature_469_residues
MFHPLVIRTTIHIEEKNEIRLPVIYTQNGVLKSYLDYSIYKRNKSMSWIDASARAVCLLVEFVEFNSTYFKYPADLFSAF
SDKLFSGTINQNGEDPTGLRWRKRSIQNGNKIISYVTQYSDWLCDHKELNNKDNLNPWREATSHEERLNWAAYSHKHKNA
FLAHTWSKKTAQDRNKSSRNVRYQQDHRANDNNSALNRFPDEYIDDLIHKGFVKPGVLATAPAYTRLELRDILITMLLHF
GGLRRSEPFHLWLEDIELHPENSNEALVLVYEPEIGQSPVSYTNGRIEVREETLAKNFQLLPRNKYEKSKKVYAGWKNNK
LSPSKKNYMVVNWFEPSAGEQFLFYWRLYLSKQRVSPHKNRKHPYAFTNQFGDPYSIDAFERKYKKAIERVGLVFEKDLG
TTPHGHRYAYINRLEKAGVGNLFVANAVHHKSIKSQDSYKSLSPKEIRSEFKCLESKTKRILELRSAYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55019; Mature: 55019

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHPLVIRTTIHIEEKNEIRLPVIYTQNGVLKSYLDYSIYKRNKSMSWIDASARAVCLLV
CCCCEEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHH
EFVEFNSTYFKYPADLFSAFSDKLFSGTINQNGEDPTGLRWRKRSIQNGNKIISYVTQYS
HHHHCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
DWLCDHKELNNKDNLNPWREATSHEERLNWAAYSHKHKNAFLAHTWSKKTAQDRNKSSRN
HHHCCHHHCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCC
VRYQQDHRANDNNSALNRFPDEYIDDLIHKGFVKPGVLATAPAYTRLELRDILITMLLHF
CCCCHHCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHH
GGLRRSEPFHLWLEDIELHPENSNEALVLVYEPEIGQSPVSYTNGRIEVREETLAKNFQL
CCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHCCCEE
LPRNKYEKSKKVYAGWKNNKLSPSKKNYMVVNWFEPSAGEQFLFYWRLYLSKQRVSPHKN
CCCCCCHHCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
RKHPYAFTNQFGDPYSIDAFERKYKKAIERVGLVFEKDLGTTPHGHRYAYINRLEKAGVG
CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEHHHHHHHHCCCC
NLFVANAVHHKSIKSQDSYKSLSPKEIRSEFKCLESKTKRILELRSAYE
CEEEEHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFHPLVIRTTIHIEEKNEIRLPVIYTQNGVLKSYLDYSIYKRNKSMSWIDASARAVCLLV
CCCCEEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHH
EFVEFNSTYFKYPADLFSAFSDKLFSGTINQNGEDPTGLRWRKRSIQNGNKIISYVTQYS
HHHHCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
DWLCDHKELNNKDNLNPWREATSHEERLNWAAYSHKHKNAFLAHTWSKKTAQDRNKSSRN
HHHCCHHHCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCC
VRYQQDHRANDNNSALNRFPDEYIDDLIHKGFVKPGVLATAPAYTRLELRDILITMLLHF
CCCCHHCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHH
GGLRRSEPFHLWLEDIELHPENSNEALVLVYEPEIGQSPVSYTNGRIEVREETLAKNFQL
CCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHCCCEE
LPRNKYEKSKKVYAGWKNNKLSPSKKNYMVVNWFEPSAGEQFLFYWRLYLSKQRVSPHKN
CCCCCCHHCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
RKHPYAFTNQFGDPYSIDAFERKYKKAIERVGLVFEKDLGTTPHGHRYAYINRLEKAGVG
CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEHHHHHHHHCCCC
NLFVANAVHHKSIKSQDSYKSLSPKEIRSEFKCLESKTKRILELRSAYE
CEEEEHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA