| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is folE [H]
Identifier: 167622364
GI number: 167622364
Start: 499051
End: 499710
Strand: Reverse
Name: folE [H]
Synonym: Shal_0424
Alternate gene names: 167622364
Gene position: 499710-499051 (Counterclockwise)
Preceding gene: 167622365
Following gene: 167622361
Centisome position: 9.56
GC content: 49.09
Gene sequence:
>660_bases ATGACATCAAAAAACGCAATCCTCAGTGAATCCGCTCAGATAGTAAAATCTGCCTTAATTGAGCGCGGCCTCGAGACCCC GATGTTGCCGAGCGAGCTAACAGCTGAAGAACGTAAAGACAAGATTGAACAGCATATGCGTGAAATCTTGACCCTAATGT CACTGGATTTGAGCGATGATAGCCTAGCCGATACCCCACGCCGTGTCGCCAAGATGTATGTCGATGAAATTTTCTCTGGC CTAGACTACGCCAATTTTCCCAAGATCACCGTTATCGAAAACAAGATGGGCTTCGATGAGATGGTCAAGGTTAACGGCAT TAACCTAACCAGTACCTGTGAGCATCACTTAGTCACTATCGATGGTCTCGCTACCGTGGCCTACTTACCACGCAAGAACA TCATCGGTCTGTCTAAGATTAACCGCATCGTGCGTTTCTTTGCCCAGCGACCACAAGTGCAGGAGCGTCTGACTCAGCAG GTTCTAGTGGCGCTACAGGCGCTATTAGGCACTAAAGATGTGGCAGTTAAGATGGATGCGGTGCACTACTGCGTAAAATC TCGCGGCGTGATGGACTCGACCAGCTCGACCACCACCACAGCACTGGGCGGCATCTTTAAGTCTAATCCAGCGACACGGG CTGAATTTCTTAGTAATTAA
Upstream 100 bases:
>100_bases ATTTTTCATTTTTTATGAGATAACTCAGTCTCTCCACGAGACTTACAGCCTAGTACGAAGGGTACGAAAATCACCACTCA ATGTTTTGGTGGAGGAACTT
Downstream 100 bases:
>100_bases GTTTAAAAGAAGGTTCTAGGTTTAAAAGAAGGTCCTAGGACGCTTCGCTTCGAGGACGGCCTTCGGCCTGCTAGGAAAAG CAGAAACCAAAAACAAAAAC
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTSKNAILSESAQIVKSALIERGLETPMLPSELTAEERKDKIEQHMREILTLMSLDLSDDSLADTPRRVAKMYVDEIFSG LDYANFPKITVIENKMGFDEMVKVNGINLTSTCEHHLVTIDGLATVAYLPRKNIIGLSKINRIVRFFAQRPQVQERLTQQ VLVALQALLGTKDVAVKMDAVHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLSN
Sequences:
>Translated_219_residues MTSKNAILSESAQIVKSALIERGLETPMLPSELTAEERKDKIEQHMREILTLMSLDLSDDSLADTPRRVAKMYVDEIFSG LDYANFPKITVIENKMGFDEMVKVNGINLTSTCEHHLVTIDGLATVAYLPRKNIIGLSKINRIVRFFAQRPQVQERLTQQ VLVALQALLGTKDVAVKMDAVHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLSN >Mature_218_residues TSKNAILSESAQIVKSALIERGLETPMLPSELTAEERKDKIEQHMREILTLMSLDLSDDSLADTPRRVAKMYVDEIFSGL DYANFPKITVIENKMGFDEMVKVNGINLTSTCEHHLVTIDGLATVAYLPRKNIIGLSKINRIVRFFAQRPQVQERLTQQV LVALQALLGTKDVAVKMDAVHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLSN
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=120, Percent_Identity=46.6666666666667, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI4503949, Length=120, Percent_Identity=46.6666666666667, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI66932970, Length=98, Percent_Identity=43.8775510204082, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI66932972, Length=82, Percent_Identity=48.780487804878, Blast_Score=82, Evalue=4e-16, Organism=Escherichia coli, GI1788476, Length=212, Percent_Identity=69.811320754717, Blast_Score=296, Evalue=6e-82, Organism=Caenorhabditis elegans, GI17560486, Length=177, Percent_Identity=38.9830508474576, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6321706, Length=183, Percent_Identity=40.4371584699454, Blast_Score=125, Evalue=6e-30, Organism=Drosophila melanogaster, GI24656796, Length=120, Percent_Identity=47.5, Blast_Score=107, Evalue=7e-24, Organism=Drosophila melanogaster, GI24656791, Length=120, Percent_Identity=47.5, Blast_Score=106, Evalue=9e-24, Organism=Drosophila melanogaster, GI24656782, Length=120, Percent_Identity=47.5, Blast_Score=106, Evalue=9e-24,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 24290; Mature: 24159
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKNAILSESAQIVKSALIERGLETPMLPSELTAEERKDKIEQHMREILTLMSLDLSDD CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SLADTPRRVAKMYVDEIFSGLDYANFPKITVIENKMGFDEMVKVNGINLTSTCEHHLVTI HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCHHEEEE DGLATVAYLPRKNIIGLSKINRIVRFFAQRPQVQERLTQQVLVALQALLGTKDVAVKMDA HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLSN HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCC >Mature Secondary Structure TSKNAILSESAQIVKSALIERGLETPMLPSELTAEERKDKIEQHMREILTLMSLDLSDD CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SLADTPRRVAKMYVDEIFSGLDYANFPKITVIENKMGFDEMVKVNGINLTSTCEHHLVTI HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCHHEEEE DGLATVAYLPRKNIIGLSKINRIVRFFAQRPQVQERLTQQVLVALQALLGTKDVAVKMDA HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLSN HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA