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The map label for this gene is spr [H]

Identifier: 167621993

GI number: 167621993

Start: 61627

End: 62097

Strand: Direct

Name: spr [H]

Synonym: Shal_0052

Alternate gene names: 167621993

Gene position: 61627-62097 (Clockwise)

Preceding gene: 167621992

Following gene: 167621996

Centisome position: 1.18

GC content: 46.92

Gene sequence:

>471_bases
ATGAGATTTTTAGCGGTTCTATTTTTTGCAGCATTGTTGAGCGCCTGTTCTAGTGCGCCATCTCAGTTGAACTCAGCGGA
TAAAACACCCTCTTTATCGAATACTCCTGAGACAAAAAATCAATTAATACAGATGCATCGAGAGTGGAAGGGCGTTCCAT
ATCGTTTAGGGGGGATGGGTAAGGGCGGTATCGACTGCTCGGGGTTTGTGTTATTGACCCTCCAGAGCCGTTTTGGAGTG
CAACTGCCTAGAACCACAGCGCAACAGAAAGAGATGGGTAAGAGCGTTAGTAAGAGCCAGTTACGCGCTGGTGATCTGGT
GTTTTTTAAAACGGGTTGGAGCACTCGTCATGTGGGGATTTACATCGGGGATTCCCAGTTCCTGCATGCCTCGACTAGCC
AAGGTGTGATGATCTCTAGCTTGAATAATAGCTATTGGAAGCAAAAGTACTGGTTATCGAGGAGACTGTGA

Upstream 100 bases:

>100_bases
TCGCCTTATGGGAAAATTTATTTACTGTTTGCTATTATTTAATCTTATTTTTAGCTCGCTGAGTTAAAGTTTAAATGAGC
GTTTTAAGATTTGGATAAAA

Downstream 100 bases:

>100_bases
TTGGAGTGCCTCAAAGTGCTAGCAAGCTTGAGTTAGCATTCTGAGGCGATATTTTGCTGAGATTTGATAGTAATTGCGAT
TAGAAGCGACGACCGACCGA

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRFLAVLFFAALLSACSSAPSQLNSADKTPSLSNTPETKNQLIQMHREWKGVPYRLGGMGKGGIDCSGFVLLTLQSRFGV
QLPRTTAQQKEMGKSVSKSQLRAGDLVFFKTGWSTRHVGIYIGDSQFLHASTSQGVMISSLNNSYWKQKYWLSRRL

Sequences:

>Translated_156_residues
MRFLAVLFFAALLSACSSAPSQLNSADKTPSLSNTPETKNQLIQMHREWKGVPYRLGGMGKGGIDCSGFVLLTLQSRFGV
QLPRTTAQQKEMGKSVSKSQLRAGDLVFFKTGWSTRHVGIYIGDSQFLHASTSQGVMISSLNNSYWKQKYWLSRRL
>Mature_156_residues
MRFLAVLFFAALLSACSSAPSQLNSADKTPSLSNTPETKNQLIQMHREWKGVPYRLGGMGKGGIDCSGFVLLTLQSRFGV
QLPRTTAQQKEMGKSVSKSQLRAGDLVFFKTGWSTRHVGIYIGDSQFLHASTSQGVMISSLNNSYWKQKYWLSRRL

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=173, Percent_Identity=47.3988439306358, Blast_Score=167, Evalue=3e-43,
Organism=Escherichia coli, GI1788001, Length=158, Percent_Identity=46.8354430379747, Blast_Score=139, Evalue=7e-35,
Organism=Escherichia coli, GI1787944, Length=146, Percent_Identity=34.2465753424658, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1786421, Length=112, Percent_Identity=33.0357142857143, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 17353; Mature: 17353

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLAVLFFAALLSACSSAPSQLNSADKTPSLSNTPETKNQLIQMHREWKGVPYRLGGMG
CHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCC
KGGIDCSGFVLLTLQSRFGVQLPRTTAQQKEMGKSVSKSQLRAGDLVFFKTGWSTRHVGI
CCCCCCCCEEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEE
YIGDSQFLHASTSQGVMISSLNNSYWKQKYWLSRRL
EECCCCEEECCCCCCEEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRFLAVLFFAALLSACSSAPSQLNSADKTPSLSNTPETKNQLIQMHREWKGVPYRLGGMG
CHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCC
KGGIDCSGFVLLTLQSRFGVQLPRTTAQQKEMGKSVSKSQLRAGDLVFFKTGWSTRHVGI
CCCCCCCCEEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEE
YIGDSQFLHASTSQGVMISSLNNSYWKQKYWLSRRL
EECCCCEEECCCCCCEEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]