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The map label for this gene is ybhS [H]

Identifier: 167621992

GI number: 167621992

Start: 60157

End: 61302

Strand: Direct

Name: ybhS [H]

Synonym: Shal_0051

Alternate gene names: 167621992

Gene position: 60157-61302 (Clockwise)

Preceding gene: 167621991

Following gene: 167621993

Centisome position: 1.15

GC content: 49.04

Gene sequence:

>1146_bases
ATGAAGACGCTTTACCGACTACAGGCGATAGTGATGAAAGAGCTAACTCAGCTTAAGCGCGACAGAATGACCTTTGGTAT
GGTGGTGATGATCCCACTGATCCAGTTGATGCTATTTGGTTTTGCCATTAATACCAATATTCGGGATATCCCGGTCGGGG
TTGTTGATCAAAGCCAAACCGCCTTGAGTCGTGTGCTAATTCAAACCGTAAGAGCCACTCAGGTGGTGGAATTCACCGAA
CATTTTTATGATACCGAGAGTGCTCATGCTGCTATCGCCCGTGGTGAAGTTAGAGCGGTATTAGTGATCCCTAACGATGT
CAGTCAGCGTTTAGTACGCCACAAAACTGTGGGGCTCGGCACGCCACCCTCCAGTGATGAAGAAACCAGTCGCCCTGTGG
CGCAGTGGATTGTGGATGGCTCAGATACTATGGTGGCTGCGGCGATAAAAAGCCTGCGTGCCATGCCATTAACTGCGCTG
CTTGGGATGCCCGCTAATCGAACCACTCCGACATTTGAGGTGGCGTTGTTTTATAACCCAGAGCAGCGCACCGCGGTGAA
TATCGTACCTGGACTGGTGGGGGTCATTCTGACCATGACCATGATTATGTTTACCTCGGCTGCCATTGTACGTGAGCGTG
AACGGGGAAACTTAGAGATGCTGATCACCACGCCAATTCGCCCCATAGAGCTAATGCTGGGTAAAATTATCCCCTACATG
TTTATCGGCATTGTGCAGGTCATCATTATTCTTGGTCTGGGATATAGTGTTTTTGATGTGCCGATAAACGGTAGTTTGCT
GCAGCTGGCCGGGGCGACCTTACTGTTTATTATGGCGAGTCTAACCTTGGGGCTCGTGATCTCGACCATAGCCAAAAGCC
AGCTACAGTCGATGCAGATGACCATTTTTGTGCTGTTGCCCTCGATTCTCTTATCTGGATTTATGTTCCCTTACGAGGGG
ATGCCTATTGAGGCGCAGTATATTGCAGAGGCGCTGCCTGCCACGCACTTTATGCGACTTATTCGTGGTGTGGTGTTGCG
AGATGTTGAAATTATCGATATGACCTATGACGTGACTTGGTTGGCGGCATTTACGATTATTGGTCTCATCGTGGCATCGA
TGCGCTTTAAAAAGAATTTAGGCTAA

Upstream 100 bases:

>100_bases
CTTTTCTGAGTCAAAAGCAGTCTCTTGCACTCGACGCGCTAACACTGGTGAGGCCGAGCCTTGAGGATGTATTCGTCACC
TGTACGGGTAAGGGGCGTCA

Downstream 100 bases:

>100_bases
TCTATATCGTCAGCCACTAGTTATAACCTAGGATATAGCTAGGGGTTTCATCTTCTCGTTCTTCTGTCTGATCCTGCTCT
TGTTTTAACTCGGACTCACT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKTLYRLQAIVMKELTQLKRDRMTFGMVVMIPLIQLMLFGFAINTNIRDIPVGVVDQSQTALSRVLIQTVRATQVVEFTE
HFYDTESAHAAIARGEVRAVLVIPNDVSQRLVRHKTVGLGTPPSSDEETSRPVAQWIVDGSDTMVAAAIKSLRAMPLTAL
LGMPANRTTPTFEVALFYNPEQRTAVNIVPGLVGVILTMTMIMFTSAAIVRERERGNLEMLITTPIRPIELMLGKIIPYM
FIGIVQVIIILGLGYSVFDVPINGSLLQLAGATLLFIMASLTLGLVISTIAKSQLQSMQMTIFVLLPSILLSGFMFPYEG
MPIEAQYIAEALPATHFMRLIRGVVLRDVEIIDMTYDVTWLAAFTIIGLIVASMRFKKNLG

Sequences:

>Translated_381_residues
MKTLYRLQAIVMKELTQLKRDRMTFGMVVMIPLIQLMLFGFAINTNIRDIPVGVVDQSQTALSRVLIQTVRATQVVEFTE
HFYDTESAHAAIARGEVRAVLVIPNDVSQRLVRHKTVGLGTPPSSDEETSRPVAQWIVDGSDTMVAAAIKSLRAMPLTAL
LGMPANRTTPTFEVALFYNPEQRTAVNIVPGLVGVILTMTMIMFTSAAIVRERERGNLEMLITTPIRPIELMLGKIIPYM
FIGIVQVIIILGLGYSVFDVPINGSLLQLAGATLLFIMASLTLGLVISTIAKSQLQSMQMTIFVLLPSILLSGFMFPYEG
MPIEAQYIAEALPATHFMRLIRGVVLRDVEIIDMTYDVTWLAAFTIIGLIVASMRFKKNLG
>Mature_381_residues
MKTLYRLQAIVMKELTQLKRDRMTFGMVVMIPLIQLMLFGFAINTNIRDIPVGVVDQSQTALSRVLIQTVRATQVVEFTE
HFYDTESAHAAIARGEVRAVLVIPNDVSQRLVRHKTVGLGTPPSSDEETSRPVAQWIVDGSDTMVAAAIKSLRAMPLTAL
LGMPANRTTPTFEVALFYNPEQRTAVNIVPGLVGVILTMTMIMFTSAAIVRERERGNLEMLITTPIRPIELMLGKIIPYM
FIGIVQVIIILGLGYSVFDVPINGSLLQLAGATLLFIMASLTLGLVISTIAKSQLQSMQMTIFVLLPSILLSGFMFPYEG
MPIEAQYIAEALPATHFMRLIRGVVLRDVEIIDMTYDVTWLAAFTIIGLIVASMRFKKNLG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=348, Percent_Identity=29.0229885057471, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI48994943, Length=361, Percent_Identity=26.5927977839335, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1787010, Length=363, Percent_Identity=25.068870523416, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI226510979, Length=401, Percent_Identity=24.4389027431421, Blast_Score=86, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24650855, Length=410, Percent_Identity=23.1707317073171, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24650853, Length=410, Percent_Identity=23.1707317073171, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI85725260, Length=410, Percent_Identity=21.7073170731707, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI85725262, Length=410, Percent_Identity=21.7073170731707, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42118; Mature: 42118

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLYRLQAIVMKELTQLKRDRMTFGMVVMIPLIQLMLFGFAINTNIRDIPVGVVDQSQT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
ALSRVLIQTVRATQVVEFTEHFYDTESAHAAIARGEVRAVLVIPNDVSQRLVRHKTVGLG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCC
TPPSSDEETSRPVAQWIVDGSDTMVAAAIKSLRAMPLTALLGMPANRTTPTFEVALFYNP
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCEEEEEEEECC
EQRTAVNIVPGLVGVILTMTMIMFTSAAIVRERERGNLEMLITTPIRPIELMLGKIIPYM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHH
FIGIVQVIIILGLGYSVFDVPINGSLLQLAGATLLFIMASLTLGLVISTIAKSQLQSMQM
HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIFVLLPSILLSGFMFPYEGMPIEAQYIAEALPATHFMRLIRGVVLRDVEIIDMTYDVTW
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEHHHHH
LAAFTIIGLIVASMRFKKNLG
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTLYRLQAIVMKELTQLKRDRMTFGMVVMIPLIQLMLFGFAINTNIRDIPVGVVDQSQT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
ALSRVLIQTVRATQVVEFTEHFYDTESAHAAIARGEVRAVLVIPNDVSQRLVRHKTVGLG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCC
TPPSSDEETSRPVAQWIVDGSDTMVAAAIKSLRAMPLTALLGMPANRTTPTFEVALFYNP
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCEEEEEEEECC
EQRTAVNIVPGLVGVILTMTMIMFTSAAIVRERERGNLEMLITTPIRPIELMLGKIIPYM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHH
FIGIVQVIIILGLGYSVFDVPINGSLLQLAGATLLFIMASLTLGLVISTIAKSQLQSMQM
HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIFVLLPSILLSGFMFPYEGMPIEAQYIAEALPATHFMRLIRGVVLRDVEIIDMTYDVTW
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEHHHHH
LAAFTIIGLIVASMRFKKNLG
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]