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The map label for this gene is nsrR [H]

Identifier: 167621980

GI number: 167621980

Start: 48028

End: 48477

Strand: Direct

Name: nsrR [H]

Synonym: Shal_0039

Alternate gene names: 167621980

Gene position: 48028-48477 (Clockwise)

Preceding gene: 167621979

Following gene: 167621985

Centisome position: 0.92

GC content: 43.56

Gene sequence:

>450_bases
ATGCAGTTAACTCGTTACACAGATTATGGCTTAAGAACGCTGATGTATTTAGCGGTGAACTCCGAGCGAGAGTCGCTTTT
CCGTATCTCTGAGATCACAGAAGTATTTGACCTGTCTGCCAACCATATTTCTAAGGTTGTACATCATTTGGGGAAGCTAG
GCTATTTGCAAACCGTTCGTGGTAAGAGTGGCGGTTTTAAACTTGCTAAACCTGCAGCTGAAATCAATATCGGTCAGGTG
GTACGGGCTTTAGAAAACTCTTTGGCGCCTATCGACTGCAGTAAGCCATATTGCTTGTTTACCCCAGCTTGTAAGCTAAA
GGGAGCATTAGGCGATGCCGTTAATGCTTATTTGGCTGTGCTAGATGCCTATACTCTAGATATGATAGTAACAAACAAGC
AAGAGCTTAAGTCGCTACTGCCAGATCTGTCTATCTCAATCTTGCAGTAA

Upstream 100 bases:

>100_bases
TGAAGCTCTGTGGTTAATCGGGTCTTTAGAAATGGCTACAAGCGCCTAAAAAACCTTTAGAAATTTTCGTTCAGATACTT
ATTTTACGGATTGTTAATCG

Downstream 100 bases:

>100_bases
CGCTTGGTCTGCTAATGATTTGGTGGCTACACGTTGCGGTAATAACTGTGAGGTGGGCACCAAGTCGATATTACTACTCT
GCAAACGGTGTAGATTCTCA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MQLTRYTDYGLRTLMYLAVNSERESLFRISEITEVFDLSANHISKVVHHLGKLGYLQTVRGKSGGFKLAKPAAEINIGQV
VRALENSLAPIDCSKPYCLFTPACKLKGALGDAVNAYLAVLDAYTLDMIVTNKQELKSLLPDLSISILQ

Sequences:

>Translated_149_residues
MQLTRYTDYGLRTLMYLAVNSERESLFRISEITEVFDLSANHISKVVHHLGKLGYLQTVRGKSGGFKLAKPAAEINIGQV
VRALENSLAPIDCSKPYCLFTPACKLKGALGDAVNAYLAVLDAYTLDMIVTNKQELKSLLPDLSISILQ
>Mature_149_residues
MQLTRYTDYGLRTLMYLAVNSERESLFRISEITEVFDLSANHISKVVHHLGKLGYLQTVRGKSGGFKLAKPAAEINIGQV
VRALENSLAPIDCSKPYCLFTPACKLKGALGDAVNAYLAVLDAYTLDMIVTNKQELKSLLPDLSISILQ

Specific function: Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=140, Percent_Identity=49.2857142857143, Blast_Score=134, Evalue=2e-33,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16419; Mature: 16419

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTRYTDYGLRTLMYLAVNSERESLFRISEITEVFDLSANHISKVVHHLGKLGYLQTVR
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHCC
GKSGGFKLAKPAAEINIGQVVRALENSLAPIDCSKPYCLFTPACKLKGALGDAVNAYLAV
CCCCCCEECCCHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHH
LDAYTLDMIVTNKQELKSLLPDLSISILQ
HHHHHHHHHCCCHHHHHHHCCCCHHEECC
>Mature Secondary Structure
MQLTRYTDYGLRTLMYLAVNSERESLFRISEITEVFDLSANHISKVVHHLGKLGYLQTVR
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHCC
GKSGGFKLAKPAAEINIGQVVRALENSLAPIDCSKPYCLFTPACKLKGALGDAVNAYLAV
CCCCCCEECCCHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHH
LDAYTLDMIVTNKQELKSLLPDLSISILQ
HHHHHHHHHCCCHHHHHHHCCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA