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The map label for this gene is 167621946

Identifier: 167621946

GI number: 167621946

Start: 6360

End: 7463

Strand: Direct

Name: 167621946

Synonym: Shal_0005

Alternate gene names: NA

Gene position: 6360-7463 (Clockwise)

Preceding gene: 167621945

Following gene: 167621949

Centisome position: 0.12

GC content: 43.57

Gene sequence:

>1104_bases
GTGCTATATGCACCGATTTTTTTTAATAATTCTGGCGTGGTTATAAGTAAATTGTTTAGTAAAGCCCTGAGAAAACTGTT
TAATATCAGAGAACAAGTCGTCATTGAAAGACCAAAGAGCTTCAGTGGTTCGATGGATCAGTTTCAAGCTAAGCAGAGTC
ATGCAGCACCTATAACTCAGAATCAACCACCGCTACAAAGCAATGATCCCGTCATCGCAATCGATCTATCGGCTCTGTTT
TATAGTCTATTATTTCCGAGTACTCAGCTTAATGGTACGGCAAATGAGCTGGAGAAGAGTGTATTTCGACGAGTAGAAGC
GGCTTTGACATCTCCTAAGGCAATTGCTGAAAGGGTGTTGAAGCTACCGACCCAAGTCGCGGCTTTAGATCAGCAACTCG
CAGATGAAAACAGCGATACTAAAGCACTGTTAGCCTTAATAGAGAGAGATCCCGTATTGAGTGTTGAAGTGCTAAAGCTA
TGTAATTCACCCCTTTTTAAACGCAGCGATAAAGAGGTGACCAGCTTACAACAGGCATTGGTACAGCTTGGTCGGGAACA
GATGCGACGCTTTGTTACTACCGCGATGATGCGTAAAGTCATTGAAGTAAAACCCATCTATTTCCGTCGTTTTGGTAGTC
AAATCTGGCGTCACTCAATGCAGGTAGCTTACCTTTCGAGTGAGCTTACTCAAGATGACCCTGATAGTGCCTTTCTGCTG
GGCTTATTGCATGATGTAGGTAAGATTGCGATTTTTAAACTGTTATTAGAGGCATTTAAACAAGCGGAGCCCGGTGAGCA
GCCCTGTTCTAGTTTGTTCAGGCAGGTGATGACCACAAAGTCTTTGAGTTTAAGTGCGTTACTGGCTCGCTACTGGGAGT
TACCATCACTATTTGAAGCAGAGCTTAGTCGTTTAGCTATCATTGACTCTAAGCCTGCTGGTGGACTTGCTGAAGTCGTT
TGGCGAGCAAACCTTATCAGTGAATGCTCTATGTTGTTTGAGGCGGGTAAGTTACAGACTCAACAACTCGATAGACTGTT
ATTTGATGCGGCCATAGACCGTGAAACCTTTGAACAACTGCATCAGAAGCTCATACTGTTTTAG

Upstream 100 bases:

>100_bases
GTAGAACCTCGTCGTGATTTCATTGAAGCCAATGCTCTGAATGTGGCGAACCTCGACGTTTAAGTTTATTATAGGTAAAC
TTAGAAATTGAGTGAAATCG

Downstream 100 bases:

>100_bases
GCTGTAAAGTCACTCAAACAAAAACGCGCCAATCGGCGCGTTTTTTATATCTGGTTTACTACAAATATTATTGCAGTAGC
GAGATATCTGCCGCATGTAG

Product: putative signal transduction protein

Products: NA

Alternate protein names: Metal Dependent Phosphohydrolase; Sensor Histidine Kinase; Histidine Kinase; HD Domain Protein; Transcriptional Regulator Fis Family; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MLYAPIFFNNSGVVISKLFSKALRKLFNIREQVVIERPKSFSGSMDQFQAKQSHAAPITQNQPPLQSNDPVIAIDLSALF
YSLLFPSTQLNGTANELEKSVFRRVEAALTSPKAIAERVLKLPTQVAALDQQLADENSDTKALLALIERDPVLSVEVLKL
CNSPLFKRSDKEVTSLQQALVQLGREQMRRFVTTAMMRKVIEVKPIYFRRFGSQIWRHSMQVAYLSSELTQDDPDSAFLL
GLLHDVGKIAIFKLLLEAFKQAEPGEQPCSSLFRQVMTTKSLSLSALLARYWELPSLFEAELSRLAIIDSKPAGGLAEVV
WRANLISECSMLFEAGKLQTQQLDRLLFDAAIDRETFEQLHQKLILF

Sequences:

>Translated_367_residues
MLYAPIFFNNSGVVISKLFSKALRKLFNIREQVVIERPKSFSGSMDQFQAKQSHAAPITQNQPPLQSNDPVIAIDLSALF
YSLLFPSTQLNGTANELEKSVFRRVEAALTSPKAIAERVLKLPTQVAALDQQLADENSDTKALLALIERDPVLSVEVLKL
CNSPLFKRSDKEVTSLQQALVQLGREQMRRFVTTAMMRKVIEVKPIYFRRFGSQIWRHSMQVAYLSSELTQDDPDSAFLL
GLLHDVGKIAIFKLLLEAFKQAEPGEQPCSSLFRQVMTTKSLSLSALLARYWELPSLFEAELSRLAIIDSKPAGGLAEVV
WRANLISECSMLFEAGKLQTQQLDRLLFDAAIDRETFEQLHQKLILF
>Mature_367_residues
MLYAPIFFNNSGVVISKLFSKALRKLFNIREQVVIERPKSFSGSMDQFQAKQSHAAPITQNQPPLQSNDPVIAIDLSALF
YSLLFPSTQLNGTANELEKSVFRRVEAALTSPKAIAERVLKLPTQVAALDQQLADENSDTKALLALIERDPVLSVEVLKL
CNSPLFKRSDKEVTSLQQALVQLGREQMRRFVTTAMMRKVIEVKPIYFRRFGSQIWRHSMQVAYLSSELTQDDPDSAFLL
GLLHDVGKIAIFKLLLEAFKQAEPGEQPCSSLFRQVMTTKSLSLSALLARYWELPSLFEAELSRLAIIDSKPAGGLAEVV
WRANLISECSMLFEAGKLQTQQLDRLLFDAAIDRETFEQLHQKLILF

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41348; Mature: 41348

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYAPIFFNNSGVVISKLFSKALRKLFNIREQVVIERPKSFSGSMDQFQAKQSHAAPITQ
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
NQPPLQSNDPVIAIDLSALFYSLLFPSTQLNGTANELEKSVFRRVEAALTSPKAIAERVL
CCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
KLPTQVAALDQQLADENSDTKALLALIERDPVLSVEVLKLCNSPLFKRSDKEVTSLQQAL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHH
VQLGREQMRRFVTTAMMRKVIEVKPIYFRRFGSQIWRHSMQVAYLSSELTQDDPDSAFLL
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
GLLHDVGKIAIFKLLLEAFKQAEPGEQPCSSLFRQVMTTKSLSLSALLARYWELPSLFEA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ELSRLAIIDSKPAGGLAEVVWRANLISECSMLFEAGKLQTQQLDRLLFDAAIDRETFEQL
HHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHH
HQKLILF
HHHHCCC
>Mature Secondary Structure
MLYAPIFFNNSGVVISKLFSKALRKLFNIREQVVIERPKSFSGSMDQFQAKQSHAAPITQ
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
NQPPLQSNDPVIAIDLSALFYSLLFPSTQLNGTANELEKSVFRRVEAALTSPKAIAERVL
CCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
KLPTQVAALDQQLADENSDTKALLALIERDPVLSVEVLKLCNSPLFKRSDKEVTSLQQAL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHH
VQLGREQMRRFVTTAMMRKVIEVKPIYFRRFGSQIWRHSMQVAYLSSELTQDDPDSAFLL
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
GLLHDVGKIAIFKLLLEAFKQAEPGEQPCSSLFRQVMTTKSLSLSALLARYWELPSLFEA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ELSRLAIIDSKPAGGLAEVVWRANLISECSMLFEAGKLQTQQLDRLLFDAAIDRETFEQL
HHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHH
HQKLILF
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA