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The map label for this gene is ykuT [H]

Identifier: 167041006

GI number: 167041006

Start: 2438686

End: 2439537

Strand: Reverse

Name: ykuT [H]

Synonym: Teth514_2396

Alternate gene names: 167041006

Gene position: 2439537-2438686 (Counterclockwise)

Preceding gene: 167041008

Following gene: 167041005

Centisome position: 99.28

GC content: 31.57

Gene sequence:

>852_bases
ATGGAGGCAATAGATCAACTATACCAAAAATTTTTAAATCTATATGATATAAAAATATTAAAAGTAACTTTCGATATCAT
AAAAATTTTAGTTATAGCTTTTATAGGTATAAAAATAGGGGACATACTTATATCAAGGTTTTACAAATTACACACAAAAG
GAAAAATACAGCTTCCTGAAAGAAAGATAGGCACTTTAATGTCCCTTACCAAAAATATATTGAGATATGTCATTTATTTC
ATTGCGGTTGCTTCAATACTAAAAATTTTCAACATAGAAATGACATCAATATTGGCAGTTGCCGGAATTGGCAGTTTGGC
TATAGGTTTTGGTGCTCAAAATCTAGTCAAAGACGTGATTTCTGGGTTTTTCATAATATTTGAAGATCAGTTTGGAGTTG
GGGATTATATAACGATAAATAATTTTTCGGGTCTTGTTGAAGAAGTAGGACTTAGAATAAGCAAAATAAGGGATTTTTCA
GGCGATTTACATATAATACCAAATGGAGAAATAAAGACTGTAACAAACCATACACGAGGCAGTATGAGAGCGCTTGTAAA
TGTAGGTATTCCTTATGAGGAAGACGTTGATAGAATAATAAATGTGCTCACTCAAATTTGTGAAGATATAAAAAAATCCA
GGAATGATGTGATAGAGGGCCCTACAGTTTTGGGAATTACGGATTTTCAGGACTCGCAAGTTTTAATAACGATTATTGCG
AAAACAGAGCCTATGAAACAATGGGAAGTTGAAAGGGATATAAGATACAGGATAAAAAAAGTATTTGATAGAGAAAAGAT
TACATTCCCGTATCCGCATACAGATGTTACAATAACAAATATTGACACATAA

Upstream 100 bases:

>100_bases
TATGTAAAATTAAATACAGGTAATTTACGGTTTTAATTGTTGAAAAACCTTTTTTACTTGTGTAATATAAAAATATAAAG
AAAATAAAGTGGGTGATGGA

Downstream 100 bases:

>100_bases
CTTGGTTAGTAATGTGTGAAAATCAAAGCACCTTTTCGGTTGATTTATTAAGTTCATAGATTGGTTAGAGGTGATTGCTT
TGCCAAAAGAACTCCATGTA

Product: mechanosensitive ion channel protein MscS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MEAIDQLYQKFLNLYDIKILKVTFDIIKILVIAFIGIKIGDILISRFYKLHTKGKIQLPERKIGTLMSLTKNILRYVIYF
IAVASILKIFNIEMTSILAVAGIGSLAIGFGAQNLVKDVISGFFIIFEDQFGVGDYITINNFSGLVEEVGLRISKIRDFS
GDLHIIPNGEIKTVTNHTRGSMRALVNVGIPYEEDVDRIINVLTQICEDIKKSRNDVIEGPTVLGITDFQDSQVLITIIA
KTEPMKQWEVERDIRYRIKKVFDREKITFPYPHTDVTITNIDT

Sequences:

>Translated_283_residues
MEAIDQLYQKFLNLYDIKILKVTFDIIKILVIAFIGIKIGDILISRFYKLHTKGKIQLPERKIGTLMSLTKNILRYVIYF
IAVASILKIFNIEMTSILAVAGIGSLAIGFGAQNLVKDVISGFFIIFEDQFGVGDYITINNFSGLVEEVGLRISKIRDFS
GDLHIIPNGEIKTVTNHTRGSMRALVNVGIPYEEDVDRIINVLTQICEDIKKSRNDVIEGPTVLGITDFQDSQVLITIIA
KTEPMKQWEVERDIRYRIKKVFDREKITFPYPHTDVTITNIDT
>Mature_283_residues
MEAIDQLYQKFLNLYDIKILKVTFDIIKILVIAFIGIKIGDILISRFYKLHTKGKIQLPERKIGTLMSLTKNILRYVIYF
IAVASILKIFNIEMTSILAVAGIGSLAIGFGAQNLVKDVISGFFIIFEDQFGVGDYITINNFSGLVEEVGLRISKIRDFS
GDLHIIPNGEIKTVTNHTRGSMRALVNVGIPYEEDVDRIINVLTQICEDIKKSRNDVIEGPTVLGITDFQDSQVLITIIA
KTEPMKQWEVERDIRYRIKKVFDREKITFPYPHTDVTITNIDT

Specific function: May play a role in resistance to osmotic downshock [H]

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI87081787, Length=256, Percent_Identity=30.46875, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789291, Length=268, Percent_Identity=24.6268656716418, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787591, Length=201, Percent_Identity=24.3781094527363, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786670, Length=137, Percent_Identity=28.4671532846715, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 32147; Mature: 32147

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAIDQLYQKFLNLYDIKILKVTFDIIKILVIAFIGIKIGDILISRFYKLHTKGKIQLPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCH
RKIGTLMSLTKNILRYVIYFIAVASILKIFNIEMTSILAVAGIGSLAIGFGAQNLVKDVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
SGFFIIFEDQFGVGDYITINNFSGLVEEVGLRISKIRDFSGDLHIIPNGEIKTVTNHTRG
CCEEEEEECCCCCCCEEEECCHHHHHHHHCHHHHHHHCCCCCEEEECCCCEEEECCCCCH
SMRALVNVGIPYEEDVDRIINVLTQICEDIKKSRNDVIEGPTVLGITDFQDSQVLITIIA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEE
KTEPMKQWEVERDIRYRIKKVFDREKITFPYPHTDVTITNIDT
CCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEECCC
>Mature Secondary Structure
MEAIDQLYQKFLNLYDIKILKVTFDIIKILVIAFIGIKIGDILISRFYKLHTKGKIQLPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCH
RKIGTLMSLTKNILRYVIYFIAVASILKIFNIEMTSILAVAGIGSLAIGFGAQNLVKDVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
SGFFIIFEDQFGVGDYITINNFSGLVEEVGLRISKIRDFSGDLHIIPNGEIKTVTNHTRG
CCEEEEEECCCCCCCEEEECCHHHHHHHHCHHHHHHHCCCCCEEEECCCCEEEECCCCCH
SMRALVNVGIPYEEDVDRIINVLTQICEDIKKSRNDVIEGPTVLGITDFQDSQVLITIIA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEE
KTEPMKQWEVERDIRYRIKKVFDREKITFPYPHTDVTITNIDT
CCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]