| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167040960
Identifier: 167040960
GI number: 167040960
Start: 2389702
End: 2390949
Strand: Reverse
Name: 167040960
Synonym: Teth514_2349
Alternate gene names: NA
Gene position: 2390949-2389702 (Counterclockwise)
Preceding gene: 167040961
Following gene: 167040959
Centisome position: 97.3
GC content: 35.66
Gene sequence:
>1248_bases ATGGCTACAGTAAAACCCTTTAAGGCAATAAGGCCTGTACCAGGATTGGCAGATAAAATAGCGTCCTTGCCTTATGACGT CGTAAATACCGAAGAAGCGAGGAATTTGGCGAAAGATAATCCTTATTCATTTCTTCATGTGGATAGAGCAGAAATAGATT TAGCTCCATCTATAAATCCTTACGATGAAATAGTTTATGAAAAAGCGAGAGAAAATTTTGACAGAATGCTTAAAAAAGGA CTGTTAATAAAAGATAATGAGGAGAACTGTTACATCTATAGAGAAATAATGAACGGCAGGAGTCAAGTGGGATTGGTAGC GACTGTTTCGATTGATGAGTATTTAGAAGGAATAATTAAAAAGCATGAGCTTACTCTGCCGGAGAAAGAACAGGATAGAA TAAATCACATGGATTACTGTGATGCTCACACAAGTCCAGTTTTTTTAACGTACAAAGCCAATCAAGAGCTTAAAAAGTTG TTAAATAGCTGGATGGAGAGCAAAAATCCTATATATGATTTTACATCAGAGGATGAAATAAGACATACAGTATGGATTAT AGATGACAAATCCTTAATAAATAAAATTACTTCTGTTTTTAAGGTAATAGACTATCTTTACATTGCAGATGGACATCATC GGGCTGCTGCTTCTGTAAAAGTAGGCTTAAAGAGGCGAGAACAAAATCCTGATTATAAAGGAGATGAGGAGTTTAACTAT TTTTTAGCAGTGTTAGTGCCCCATGATGAAGCTTATATCATGCCTTATAATAGGGTGGTAAAAGATTTAAACGGCTATTC TGAAAGTGAATTTATTGAGAAGATAAAAGAGAAATTTGAAGTAGAGAAATGTAATGAAGGCCAGCCTTTCAATCCTTCGC AAAAGCACACTTTTGGCATGTATCTATCAGGGAAGTGGTACAAACTTACTGCCAAAGAAGGTACTTTTAACCCATCGGAT CCGATAGAAAGTTTGGATGTGTCCATCTTACAAAAAAATCTGTTAGATCCTATTTTGGGGATAAAAGATCCGAGAACTGA TAAAAGGATTGATTTTGTAGGAGGAATTAGAGGCTTAGAAGAATTAGAAAGAAGAGTTAAGGAAGACATGAAAGTGGCTT TTTCTATGCATCCGACAACAGTTGAAGATTTAATTGCTGTTGCCGATGCGAGAATGATAATGCCTCCTAAGTCTACCTGG TTTGAGCCTAAACTAAGAAGCGGATTATTTATTCATGAATTGAGATAA
Upstream 100 bases:
>100_bases AGTGGAGAGAGTGTGTCAGTTTAATACATTGCATTTATAAAGTGATATGATATAATAAAAGCATTGAAATCAGTTGAAAT AAATTTTTAGGAGGATTATT
Downstream 100 bases:
>100_bases AAGCACCTTTTCTTTTTTAAGGTGCTTTTTATTTTTTAAGTGAAAAAGTTCTATTATTTAAAAATTTGTACTAATATATA TTGAAGGATAATTTAGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MATVKPFKAIRPVPGLADKIASLPYDVVNTEEARNLAKDNPYSFLHVDRAEIDLAPSINPYDEIVYEKARENFDRMLKKG LLIKDNEENCYIYREIMNGRSQVGLVATVSIDEYLEGIIKKHELTLPEKEQDRINHMDYCDAHTSPVFLTYKANQELKKL LNSWMESKNPIYDFTSEDEIRHTVWIIDDKSLINKITSVFKVIDYLYIADGHHRAAASVKVGLKRREQNPDYKGDEEFNY FLAVLVPHDEAYIMPYNRVVKDLNGYSESEFIEKIKEKFEVEKCNEGQPFNPSQKHTFGMYLSGKWYKLTAKEGTFNPSD PIESLDVSILQKNLLDPILGIKDPRTDKRIDFVGGIRGLEELERRVKEDMKVAFSMHPTTVEDLIAVADARMIMPPKSTW FEPKLRSGLFIHELR
Sequences:
>Translated_415_residues MATVKPFKAIRPVPGLADKIASLPYDVVNTEEARNLAKDNPYSFLHVDRAEIDLAPSINPYDEIVYEKARENFDRMLKKG LLIKDNEENCYIYREIMNGRSQVGLVATVSIDEYLEGIIKKHELTLPEKEQDRINHMDYCDAHTSPVFLTYKANQELKKL LNSWMESKNPIYDFTSEDEIRHTVWIIDDKSLINKITSVFKVIDYLYIADGHHRAAASVKVGLKRREQNPDYKGDEEFNY FLAVLVPHDEAYIMPYNRVVKDLNGYSESEFIEKIKEKFEVEKCNEGQPFNPSQKHTFGMYLSGKWYKLTAKEGTFNPSD PIESLDVSILQKNLLDPILGIKDPRTDKRIDFVGGIRGLEELERRVKEDMKVAFSMHPTTVEDLIAVADARMIMPPKSTW FEPKLRSGLFIHELR >Mature_414_residues ATVKPFKAIRPVPGLADKIASLPYDVVNTEEARNLAKDNPYSFLHVDRAEIDLAPSINPYDEIVYEKARENFDRMLKKGL LIKDNEENCYIYREIMNGRSQVGLVATVSIDEYLEGIIKKHELTLPEKEQDRINHMDYCDAHTSPVFLTYKANQELKKLL NSWMESKNPIYDFTSEDEIRHTVWIIDDKSLINKITSVFKVIDYLYIADGHHRAAASVKVGLKRREQNPDYKGDEEFNYF LAVLVPHDEAYIMPYNRVVKDLNGYSESEFIEKIKEKFEVEKCNEGQPFNPSQKHTFGMYLSGKWYKLTAKEGTFNPSDP IESLDVSILQKNLLDPILGIKDPRTDKRIDFVGGIRGLEELERRVKEDMKVAFSMHPTTVEDLIAVADARMIMPPKSTWF EPKLRSGLFIHELR
Specific function: Unknown
COG id: COG4198
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48004; Mature: 47873
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVKPFKAIRPVPGLADKIASLPYDVVNTEEARNLAKDNPYSFLHVDRAEIDLAPSINP CCCCCCHHHHCCCCCHHHHHHHCCCHHCCCHHHHHHHCCCCCEEEEEEHHHEEECCCCCH YDEIVYEKARENFDRMLKKGLLIKDNEENCYIYREIMNGRSQVGLVATVSIDEYLEGIIK HHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEHHHHCCCCCCCEEEEEEHHHHHHHHHH KHELTLPEKEQDRINHMDYCDAHTSPVFLTYKANQELKKLLNSWMESKNPIYDFTSEDEI HHCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCC RHTVWIIDDKSLINKITSVFKVIDYLYIADGHHRAAASVKVGLKRREQNPDYKGDEEFNY EEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEE FLAVLVPHDEAYIMPYNRVVKDLNGYSESEFIEKIKEKFEVEKCNEGQPFNPSQKHTFGM EEEEEEECCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE YLSGKWYKLTAKEGTFNPSDPIESLDVSILQKNLLDPILGIKDPRTDKRIDFVGGIRGLE EECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHH ELERRVKEDMKVAFSMHPTTVEDLIAVADARMIMPPKSTWFEPKLRSGLFIHELR HHHHHHHHHHHEEEEECCCCHHHHHHHHCCCEECCCCCCCCCHHHHCCEEEEECC >Mature Secondary Structure ATVKPFKAIRPVPGLADKIASLPYDVVNTEEARNLAKDNPYSFLHVDRAEIDLAPSINP CCCCCHHHHCCCCCHHHHHHHCCCHHCCCHHHHHHHCCCCCEEEEEEHHHEEECCCCCH YDEIVYEKARENFDRMLKKGLLIKDNEENCYIYREIMNGRSQVGLVATVSIDEYLEGIIK HHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEHHHHCCCCCCCEEEEEEHHHHHHHHHH KHELTLPEKEQDRINHMDYCDAHTSPVFLTYKANQELKKLLNSWMESKNPIYDFTSEDEI HHCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCC RHTVWIIDDKSLINKITSVFKVIDYLYIADGHHRAAASVKVGLKRREQNPDYKGDEEFNY EEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEE FLAVLVPHDEAYIMPYNRVVKDLNGYSESEFIEKIKEKFEVEKCNEGQPFNPSQKHTFGM EEEEEEECCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE YLSGKWYKLTAKEGTFNPSDPIESLDVSILQKNLLDPILGIKDPRTDKRIDFVGGIRGLE EECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHH ELERRVKEDMKVAFSMHPTTVEDLIAVADARMIMPPKSTWFEPKLRSGLFIHELR HHHHHHHHHHHEEEEECCCCHHHHHHHHCCCEECCCCCCCCCHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA