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The map label for this gene is rlmH1

Identifier: 167040950

GI number: 167040950

Start: 2380000

End: 2380401

Strand: Direct

Name: rlmH1

Synonym: Teth514_2339

Alternate gene names: 167040950

Gene position: 2380000-2380401 (Clockwise)

Preceding gene: 167040933

Following gene: 167040957

Centisome position: 96.86

GC content: 30.1

Gene sequence:

>402_bases
ATGAATTATAAAGTCTATGCTACAGGTAATAAAATAGAAAAGTTTTATTCTGATGCAATAAAAGAATATCAAAAGAGGTT
AAACCGCTTTTGTAATATTTCCTTTACAAACTACAAAAATCCTCAACAGTTGCCCAAGCAACAAATAGACAAATATTATA
AAATCGGAATATTACCTTCAGGAAAATCGCTGTCTTCTGAAGAATTAGCAGAAAAAATAAAAGAGCTTGAACTTTCAGCA
AAGACAGATATATTAATAGTCATAGGAAATGAGGAAATTCCCTTAAATGAAAGCATTAGCATAAGTCCTATGGAAATGAG
TTTAGGCCTTGCATCTACTATTCTTTTTGAACAGTTGTATCGCGCTTATAAAATTTTAAACAATGAACCTTATCACAAGT
GA

Upstream 100 bases:

>100_bases
ATTGTATCAAATGAAAAGCATATTTTCAAATATTTTTGACAATATAATTTTATCACTTTATAATATTGACTATCAACAAA
ATACAAAGAGAAGTGATAGG

Downstream 100 bases:

>100_bases
TTTTTACCATCAAATGCTAAATAAAGCTGTTCTAAAAGTATGAGCCGCATCAATTGATGAGGAAATGTCATTTTAGAAAA
AGAAAGATTTAAGTGAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: 23S rRNA m3Psi1915 methyltransferase 1; rRNA (pseudouridine-N3-)-methyltransferase rlmH 1

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MNYKVYATGNKIEKFYSDAIKEYQKRLNRFCNISFTNYKNPQQLPKQQIDKYYKIGILPSGKSLSSEELAEKIKELELSA
KTDILIVIGNEEIPLNESISISPMEMSLGLASTILFEQLYRAYKILNNEPYHK

Sequences:

>Translated_133_residues
MNYKVYATGNKIEKFYSDAIKEYQKRLNRFCNISFTNYKNPQQLPKQQIDKYYKIGILPSGKSLSSEELAEKIKELELSA
KTDILIVIGNEEIPLNESISISPMEMSLGLASTILFEQLYRAYKILNNEPYHK
>Mature_133_residues
MNYKVYATGNKIEKFYSDAIKEYQKRLNRFCNISFTNYKNPQQLPKQQIDKYYKIGILPSGKSLSSEELAEKIKELELSA
KTDILIVIGNEEIPLNESISISPMEMSLGLASTILFEQLYRAYKILNNEPYHK

Specific function: Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA

COG id: COG1576

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase rlmH family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RLMH1_THEPX (B0K568)

Other databases:

- EMBL:   CP000923
- RefSeq:   YP_001663935.1
- ProteinModelPortal:   B0K568
- SMR:   B0K568
- GeneID:   5875869
- GenomeReviews:   CP000923_GR
- KEGG:   tex:Teth514_2339
- HOGENOM:   HBG622807
- OMA:   ISLSICK
- ProtClustDB:   CLSK901811
- BioCyc:   TSP1755:TETH514_2339-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00658
- InterPro:   IPR003742

Pfam domain/function: PF02590 SPOUT_MTase

EC number: NA

Molecular weight: Translated: 15421; Mature: 15421

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKVYATGNKIEKFYSDAIKEYQKRLNRFCNISFTNYKNPQQLPKQQIDKYYKIGILPS
CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEECCCC
GKSLSSEELAEKIKELELSAKTDILIVIGNEEIPLNESISISPMEMSLGLASTILFEQLY
CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RAYKILNNEPYHK
HHHHHHCCCCCCC
>Mature Secondary Structure
MNYKVYATGNKIEKFYSDAIKEYQKRLNRFCNISFTNYKNPQQLPKQQIDKYYKIGILPS
CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEECCCC
GKSLSSEELAEKIKELELSAKTDILIVIGNEEIPLNESISISPMEMSLGLASTILFEQLY
CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RAYKILNNEPYHK
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA