| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167040817
Identifier: 167040817
GI number: 167040817
Start: 2195193
End: 2196437
Strand: Reverse
Name: 167040817
Synonym: Teth514_2194
Alternate gene names: NA
Gene position: 2196437-2195193 (Counterclockwise)
Preceding gene: 167040818
Following gene: 167040816
Centisome position: 89.39
GC content: 37.83
Gene sequence:
>1245_bases ATGAAGAAGTTTTACACTAAGTTAATAGCAGTTTTAATCATTATCTCGCTTCTAGGTACTGTTATTGCAGGCTGTGGCAG CAAGACCCAATCAGAAGCGAGGAAAAAAGTTTTGAAAGTTTCAATGGGACTTGGAGAAGCAGAATGGAAAGTGATGAAAG AAGATATTTTCCCACCATTTGAGCAAAAGTATGGTGTAAAAATTGAACCTCTTCAAATCGAAGCAGGAGACCTTATTAAA AAATTAGATGCTATGCACAAAGCAAATGCGATGGATATAGACATTATCACACAAGATAACATGCAACTTGCTCCACTTGT TGCAAAAGGGCTTGTGGAAGATTTGTCTCAGTATAGAGACATGATACCAAAGGAAGTAATACCAAGTCTTGTGCCAGTAG GAGAGTTTGATGGAAAGTTGTACTTTATGCCGTATAGACCAAATGTAGAAATAGCTTTCTACAACGAAGATAAATTCAAC GAATACGGTTTAAAACTACCTACAAATTGGGATGAGCTTTTACAGGTTGCAAAGACTTTTAAAGAAAAAGAGGGCATAGG TAGAGTCATAATTAAAGAAAATTTAGGGCCTGACAGCACAGTCCACATGTTTGACCTTATAAGGTCTGCTGGTGGTGACC CAACAGTATTGAATGATGAGGGTTCAATAAAAGCATTTACTTTCTTGAAAGAAATACAGCCATATCTCTCTCCTGACTCA AAGAAAGCTGACTGGAATACACCTGTAGAATATCTTGCAAAAGAGAGCGTATATTTGGTTCAAAATTGGCCGTACACTGC AAACGTTCTTGTAGAGCAGTATGGAAAAAAGAACATTTTGGCATATCACGGATGGACAGGTCCGGTTAAAGAGTCCCACG TTTTGGGAGGAGAAGTTATAGGAATACCAACTGGTGCACCTAATAAAGAGATGGCTATAAAGTTTATGGAATACCTTATG AGTAAAGAAGTTCAAGAGAAACTTGTCACTAAATTAGGATGGCCATCCATGAGAAGTGACGCTTATGGGAAGGTTGCAGA GTGGCAAAAACCATATTTTGAAGCTATAAATGAAGCGTTAAAACATGCAGAACCAAGGCCAAACCTTGTATACTGGGCTG ATGTGGACAAAGCTATAAATGGAGCATTGAGAGAAATAATATTTGAAGGCAAAGATATCAAGACAACTCTTGACAAATAT CACAACATGATAGAAGAAGCTAAGAAAGCTGCAGAAAGCAAGTAA
Upstream 100 bases:
>100_bases GGATATCTTGCAGGGGCTGTAAAAGGTTAGTATATACGTATCCGAGTTTTTCGGATACTGTATATATAAAAATTAAATTT TAAGGAGGTTTTATTAAGCT
Downstream 100 bases:
>100_bases ATGTTTTAAATTGTTTTAGTCGGAAACGACTTTGTTTCCGACTAAAATTTTGAATAAAGTAAGAGTGGAGGATGGATATG GCCAACAAAACGAAGAAACC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: ABC-Type Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MKKFYTKLIAVLIIISLLGTVIAGCGSKTQSEARKKVLKVSMGLGEAEWKVMKEDIFPPFEQKYGVKIEPLQIEAGDLIK KLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYRDMIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNEDKFN EYGLKLPTNWDELLQVAKTFKEKEGIGRVIIKENLGPDSTVHMFDLIRSAGGDPTVLNDEGSIKAFTFLKEIQPYLSPDS KKADWNTPVEYLAKESVYLVQNWPYTANVLVEQYGKKNILAYHGWTGPVKESHVLGGEVIGIPTGAPNKEMAIKFMEYLM SKEVQEKLVTKLGWPSMRSDAYGKVAEWQKPYFEAINEALKHAEPRPNLVYWADVDKAINGALREIIFEGKDIKTTLDKY HNMIEEAKKAAESK
Sequences:
>Translated_414_residues MKKFYTKLIAVLIIISLLGTVIAGCGSKTQSEARKKVLKVSMGLGEAEWKVMKEDIFPPFEQKYGVKIEPLQIEAGDLIK KLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYRDMIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNEDKFN EYGLKLPTNWDELLQVAKTFKEKEGIGRVIIKENLGPDSTVHMFDLIRSAGGDPTVLNDEGSIKAFTFLKEIQPYLSPDS KKADWNTPVEYLAKESVYLVQNWPYTANVLVEQYGKKNILAYHGWTGPVKESHVLGGEVIGIPTGAPNKEMAIKFMEYLM SKEVQEKLVTKLGWPSMRSDAYGKVAEWQKPYFEAINEALKHAEPRPNLVYWADVDKAINGALREIIFEGKDIKTTLDKY HNMIEEAKKAAESK >Mature_414_residues MKKFYTKLIAVLIIISLLGTVIAGCGSKTQSEARKKVLKVSMGLGEAEWKVMKEDIFPPFEQKYGVKIEPLQIEAGDLIK KLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYRDMIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNEDKFN EYGLKLPTNWDELLQVAKTFKEKEGIGRVIIKENLGPDSTVHMFDLIRSAGGDPTVLNDEGSIKAFTFLKEIQPYLSPDS KKADWNTPVEYLAKESVYLVQNWPYTANVLVEQYGKKNILAYHGWTGPVKESHVLGGEVIGIPTGAPNKEMAIKFMEYLM SKEVQEKLVTKLGWPSMRSDAYGKVAEWQKPYFEAINEALKHAEPRPNLVYWADVDKAINGALREIIFEGKDIKTTLDKY HNMIEEAKKAAESK
Specific function: Unknown
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46790; Mature: 46790
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFYTKLIAVLIIISLLGTVIAGCGSKTQSEARKKVLKVSMGLGEAEWKVMKEDIFPPF CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH EQKYGVKIEPLQIEAGDLIKKLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYRD HHCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH MIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNEDKFNEYGLKLPTNWDELLQVAKTF CCCHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH KEKEGIGRVIIKENLGPDSTVHMFDLIRSAGGDPTVLNDEGSIKAFTFLKEIQPYLSPDS HHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHCCCCC KKADWNTPVEYLAKESVYLVQNWPYTANVLVEQYGKKNILAYHGWTGPVKESHVLGGEVI CCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEE GIPTGAPNKEMAIKFMEYLMSKEVQEKLVTKLGWPSMRSDAYGKVAEWQKPYFEAINEAL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHH KHAEPRPNLVYWADVDKAINGALREIIFEGKDIKTTLDKYHNMIEEAKKAAESK HCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKFYTKLIAVLIIISLLGTVIAGCGSKTQSEARKKVLKVSMGLGEAEWKVMKEDIFPPF CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH EQKYGVKIEPLQIEAGDLIKKLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYRD HHCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH MIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNEDKFNEYGLKLPTNWDELLQVAKTF CCCHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH KEKEGIGRVIIKENLGPDSTVHMFDLIRSAGGDPTVLNDEGSIKAFTFLKEIQPYLSPDS HHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHCCCCC KKADWNTPVEYLAKESVYLVQNWPYTANVLVEQYGKKNILAYHGWTGPVKESHVLGGEVI CCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEE GIPTGAPNKEMAIKFMEYLMSKEVQEKLVTKLGWPSMRSDAYGKVAEWQKPYFEAINEAL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHH KHAEPRPNLVYWADVDKAINGALREIIFEGKDIKTTLDKYHNMIEEAKKAAESK HCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA