| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is mreC [H]
Identifier: 167040756
GI number: 167040756
Start: 2138222
End: 2139055
Strand: Reverse
Name: mreC [H]
Synonym: Teth514_2133
Alternate gene names: 167040756
Gene position: 2139055-2138222 (Counterclockwise)
Preceding gene: 167040757
Following gene: 167040755
Centisome position: 87.05
GC content: 33.57
Gene sequence:
>834_bases GTGCCACGCTTTTTTAGAAATAATAAGCAATTTATTTTGTTTTTTTTGATAGCCGTGGCGCTTATTGCCGCCATGGCTTA TACTTATGGTACAGAAAGGTATGTTACTAAAGTAGAATCTATAGTTGGAACTGTTTTTACTCCCATTCAAAAAGTTTTCT ATCAAATGGGAGAGGAAATTTCTAATTTCTTTTCTTCAATTAGTGAGATAGGTACTTTAAGGGCAACAAATGAAAAACTT CAAAAAGAAGTAGAAAAATTGAGAAAAGAAAATATTCAGTTACAGGAATTAATGAACGAAAATAAAAGGCTTAAAGAGGC TTTAAATTTTAAAACAGAAAATGTTGAACTAGATTTAAAACTTGCTACTATAACAGGAAAGAATTCAGGTAATTGGTTTA ATATTTTTACTATTGATAAAGGCAAAAATGAGGGTATAAAACCTGGCATGGCAGTTTTAGATGAAAAAGGAAATATGGTA GGACAGATTACAGAAGTAGGAGACAATTGGGCAAAGGTATTAGCCATTATAGATAGAGATAGTTCTGTAAGTGCTGTAGC TGTGCGAACTCGTGATAATGGTGTGGTAAGAGGAGATTCAAACGGTGGACTTATCATGATATATCTTCCCTTAGATGCCG AATTGATAGAAGGTGACGTAGTAACTACTTCTGGTATGAGTAGATTCCCAAAAGGTTTGATAATAGGAAAAGTATCAAAA GTTACTCGAGATCCAGGTTCTTTGCTAAAACAAGCCGTCATAGAACCAGCTGCTGATTTTGAAAGATTGGAGTATGTGTT TGTAGTTACTAATACAACAAATACAGGGAAGTAG
Upstream 100 bases:
>100_bases CAGATTGTGTGGCACTTGGAGCAGGGAAAATTTTAGAGGAAAGTTCCCTCTTTAGGAGAGTTTTAAGTCCGGCAACTAGA GTTTGAGAGGTGTTATTGGC
Downstream 100 bases:
>100_bases ATTATTATGAGAAAAGTGTATAAATATTTATTGATTGTTTTGTTAATTGTTTTACAAGCAACTTTATTCAGATTTATAGA TATTTTCGGTGTCAAACCAG
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MPRFFRNNKQFILFFLIAVALIAAMAYTYGTERYVTKVESIVGTVFTPIQKVFYQMGEEISNFFSSISEIGTLRATNEKL QKEVEKLRKENIQLQELMNENKRLKEALNFKTENVELDLKLATITGKNSGNWFNIFTIDKGKNEGIKPGMAVLDEKGNMV GQITEVGDNWAKVLAIIDRDSSVSAVAVRTRDNGVVRGDSNGGLIMIYLPLDAELIEGDVVTTSGMSRFPKGLIIGKVSK VTRDPGSLLKQAVIEPAADFERLEYVFVVTNTTNTGK
Sequences:
>Translated_277_residues MPRFFRNNKQFILFFLIAVALIAAMAYTYGTERYVTKVESIVGTVFTPIQKVFYQMGEEISNFFSSISEIGTLRATNEKL QKEVEKLRKENIQLQELMNENKRLKEALNFKTENVELDLKLATITGKNSGNWFNIFTIDKGKNEGIKPGMAVLDEKGNMV GQITEVGDNWAKVLAIIDRDSSVSAVAVRTRDNGVVRGDSNGGLIMIYLPLDAELIEGDVVTTSGMSRFPKGLIIGKVSK VTRDPGSLLKQAVIEPAADFERLEYVFVVTNTTNTGK >Mature_276_residues PRFFRNNKQFILFFLIAVALIAAMAYTYGTERYVTKVESIVGTVFTPIQKVFYQMGEEISNFFSSISEIGTLRATNEKLQ KEVEKLRKENIQLQELMNENKRLKEALNFKTENVELDLKLATITGKNSGNWFNIFTIDKGKNEGIKPGMAVLDEKGNMVG QITEVGDNWAKVLAIIDRDSSVSAVAVRTRDNGVVRGDSNGGLIMIYLPLDAELIEGDVVTTSGMSRFPKGLIIGKVSKV TRDPGSLLKQAVIEPAADFERLEYVFVVTNTTNTGK
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 30847; Mature: 30716
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFFRNNKQFILFFLIAVALIAAMAYTYGTERYVTKVESIVGTVFTPIQKVFYQMGEEI CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNFFSSISEIGTLRATNEKLQKEVEKLRKENIQLQELMNENKRLKEALNFKTENVELDLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEE LATITGKNSGNWFNIFTIDKGKNEGIKPGMAVLDEKGNMVGQITEVGDNWAKVLAIIDRD EEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHCCCCCEEEEHHHHCCCHHHEEEEEECC SSVSAVAVRTRDNGVVRGDSNGGLIMIYLPLDAELIEGDVVTTSGMSRFPKGLIIGKVSK CCCEEEEEEECCCCEEEECCCCCEEEEEECCCCEECCCCEEECCCHHHCCCCEEEECHHH VTRDPGSLLKQAVIEPAADFERLEYVFVVTNTTNTGK HCCCHHHHHHHHHHCCCCCHHHEEEEEEEECCCCCCC >Mature Secondary Structure PRFFRNNKQFILFFLIAVALIAAMAYTYGTERYVTKVESIVGTVFTPIQKVFYQMGEEI CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNFFSSISEIGTLRATNEKLQKEVEKLRKENIQLQELMNENKRLKEALNFKTENVELDLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEE LATITGKNSGNWFNIFTIDKGKNEGIKPGMAVLDEKGNMVGQITEVGDNWAKVLAIIDRD EEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHCCCCCEEEEHHHHCCCHHHEEEEEECC SSVSAVAVRTRDNGVVRGDSNGGLIMIYLPLDAELIEGDVVTTSGMSRFPKGLIIGKVSK CCCEEEEEEECCCCEEEECCCCCEEEEEECCCCEECCCCEEECCCHHHCCCCEEEECHHH VTRDPGSLLKQAVIEPAADFERLEYVFVVTNTTNTGK HCCCHHHHHHHHHHCCCCCHHHEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400225; 1400224; 9384377 [H]