| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167040746
Identifier: 167040746
GI number: 167040746
Start: 2128393
End: 2130246
Strand: Reverse
Name: 167040746
Synonym: Teth514_2123
Alternate gene names: NA
Gene position: 2130246-2128393 (Counterclockwise)
Preceding gene: 167040747
Following gene: 167040745
Centisome position: 86.69
GC content: 33.71
Gene sequence:
>1854_bases ATGAATAACTTAAAGGATAAAATAGATGCTTTGCTTATGAAAGTAAGCAAACCTACAAGATACACAGGAGGAGAATTAAA TTCTTCTATAAAAAATCCGGAGGAAGTCAAAGTAAGGTTTGCCTTTGCTTTTCCGGATGTATATGAAGTGGGAATGTCTC ATTTGGGACTACGAATTTTATACCATCTTTTAAACAAAAGAGAAGACGTATATTGTGAAAGGGTTTTTGCGCCATGGTTG GATATGGAAAAACTCATGAGGGAAAATAACATTCCTCTTTTTAGTTTAGAGACAAAAACCCCATTAGATAAATTTGACTT TATAGGTTTTACTCTTCAGTATGAGTTAAGTTATACAAATGTAATAAATATGCTTAATTTAGCGGGTATTCCTATCCTAT CAAGAGAGAGGAAAGGGTTACCTTTTGTCATTGCTGGTGGACCCTGTGCGTATAACCCTGCTCCTTTATCTGACGTTATT GACTTTTTTGTAATGGGAGAAGGAGAAGAGGTTATAAATGAAATTATTGACGCTTATATAGATTGGAAGAAAAAAAGAGG AGAAAGAGAAGAATTTTTACAAATTGTTTCTCAAATCAAAGGAGTATATGTTCCTAAGTACTATATAGAAGTATACAATC AAGATGGAACAATAAAAGAGATAAGGACTATTAAAAAAGGAGTGCCCGAAAAGGTAAAGAAAAGAATAGTTAAAGATTTT GAAAATGTGTATCATCCTGAGGAGCAAATTGTTCCTTTTATGGACATAGTTCACGATAGAATAATGTTAGAAATCTTTAG AGGTTGTACACGAGGATGCAGATTTTGTCAAGCTGGCATGATATATAGGCCAGTGAGGGAAAAATCAAAGGAAAAAATTT TAGATTTAGCGGACAAGCTTATAAAATCTACAGGGTATGAGGAAATATCTTTAACTTCTTTAAGTACTTGTGATTATTCT CAAATTGAAGACTTAGTCAAAAAACTGATTGAGAAATATAAGGATAAAGGAGTTGGAGTTTCTATACCCTCTACACGGGT AGACGCTGTATCTATAAATTTGCTGAAAGAAATACAAAAGGTTAGAAAAACAGGTCTTACTTTAGCACCAGAAGCTGGCA CACAAAGACTTAGAGATGTAATTAATAAAGGGATTACAGAGGAAAATATTCTAGAGGCGACAAAAGAGGCTTTTTCTGCA GGATGGACAAATGTCAAACTTTATTTTATGATTGGTCTTCCTACAGAGACGATGGAAGATGTAGAGGGGATAGTGGATTT GGCTTATAAAATAGTAGATAATTACAAAGAAGTAAAAGGGAATGTGAAGAATTTAAAAGTCACCATAAGCACTTCTACTT TTGTACCTAAACCTTTTACACCTTTTCAGTGGACGGCTCAAAACAGCATTAAAGAAATAATGGAAAAGCAAGATTTGCTA AAAAAGAAACTTAAGAGTAAAGTGTTAAAGTACAACTGGCACAATCCTTATATGAGTTTTTTAGAAGCTGTTATTTCGAG AGGAGATAGAAAAGTAGGAAAAGCTATAATAAAAGCGTGGGAAAAAGGATGCAAATTTGACGGATGGGAAGAATATTTTA ATTATGACAAATGGGAAAAGGCTTTTAAGGAAGCAGGTGTAAATCCTCATTTTTATGCTAACAGAGAAAGAAGTTTAGAA GAAGTATTTCCATGGGATGTAATAGACGTTGGGGTAGATAAAAGATATTTGATTAGAGAATATAAAAAATCTCAAGAAGG AAGAATTACACCTGACTGCAGGCTCTATTGTACAGGTTGTGGAGTAAAGGATTTTGATGAGGGGGTAGTGTGTTTTGAAG CGCCTCAGAAATAA
Upstream 100 bases:
>100_bases AAATATAGAATAACCGAGACTCAGCTTTTTGAATATGCGGTAGAACATGGATTGTATTTACCAATTGGTGAGATTATAAA ATGACTATGGAGGAAGGAAA
Downstream 100 bases:
>100_bases GTATATAAAAGATGAAAGAGTCAAATTTATTTCCCATTTAGACCTTTTGCGAGTATTTCAAAGGGCTTTGAGAAGAGCCG ATATAAAAGTCGCTTTTTCA
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 617; Mature: 617
Protein sequence:
>617_residues MNNLKDKIDALLMKVSKPTRYTGGELNSSIKNPEEVKVRFAFAFPDVYEVGMSHLGLRILYHLLNKREDVYCERVFAPWL DMEKLMRENNIPLFSLETKTPLDKFDFIGFTLQYELSYTNVINMLNLAGIPILSRERKGLPFVIAGGPCAYNPAPLSDVI DFFVMGEGEEVINEIIDAYIDWKKKRGEREEFLQIVSQIKGVYVPKYYIEVYNQDGTIKEIRTIKKGVPEKVKKRIVKDF ENVYHPEEQIVPFMDIVHDRIMLEIFRGCTRGCRFCQAGMIYRPVREKSKEKILDLADKLIKSTGYEEISLTSLSTCDYS QIEDLVKKLIEKYKDKGVGVSIPSTRVDAVSINLLKEIQKVRKTGLTLAPEAGTQRLRDVINKGITEENILEATKEAFSA GWTNVKLYFMIGLPTETMEDVEGIVDLAYKIVDNYKEVKGNVKNLKVTISTSTFVPKPFTPFQWTAQNSIKEIMEKQDLL KKKLKSKVLKYNWHNPYMSFLEAVISRGDRKVGKAIIKAWEKGCKFDGWEEYFNYDKWEKAFKEAGVNPHFYANRERSLE EVFPWDVIDVGVDKRYLIREYKKSQEGRITPDCRLYCTGCGVKDFDEGVVCFEAPQK
Sequences:
>Translated_617_residues MNNLKDKIDALLMKVSKPTRYTGGELNSSIKNPEEVKVRFAFAFPDVYEVGMSHLGLRILYHLLNKREDVYCERVFAPWL DMEKLMRENNIPLFSLETKTPLDKFDFIGFTLQYELSYTNVINMLNLAGIPILSRERKGLPFVIAGGPCAYNPAPLSDVI DFFVMGEGEEVINEIIDAYIDWKKKRGEREEFLQIVSQIKGVYVPKYYIEVYNQDGTIKEIRTIKKGVPEKVKKRIVKDF ENVYHPEEQIVPFMDIVHDRIMLEIFRGCTRGCRFCQAGMIYRPVREKSKEKILDLADKLIKSTGYEEISLTSLSTCDYS QIEDLVKKLIEKYKDKGVGVSIPSTRVDAVSINLLKEIQKVRKTGLTLAPEAGTQRLRDVINKGITEENILEATKEAFSA GWTNVKLYFMIGLPTETMEDVEGIVDLAYKIVDNYKEVKGNVKNLKVTISTSTFVPKPFTPFQWTAQNSIKEIMEKQDLL KKKLKSKVLKYNWHNPYMSFLEAVISRGDRKVGKAIIKAWEKGCKFDGWEEYFNYDKWEKAFKEAGVNPHFYANRERSLE EVFPWDVIDVGVDKRYLIREYKKSQEGRITPDCRLYCTGCGVKDFDEGVVCFEAPQK >Mature_617_residues MNNLKDKIDALLMKVSKPTRYTGGELNSSIKNPEEVKVRFAFAFPDVYEVGMSHLGLRILYHLLNKREDVYCERVFAPWL DMEKLMRENNIPLFSLETKTPLDKFDFIGFTLQYELSYTNVINMLNLAGIPILSRERKGLPFVIAGGPCAYNPAPLSDVI DFFVMGEGEEVINEIIDAYIDWKKKRGEREEFLQIVSQIKGVYVPKYYIEVYNQDGTIKEIRTIKKGVPEKVKKRIVKDF ENVYHPEEQIVPFMDIVHDRIMLEIFRGCTRGCRFCQAGMIYRPVREKSKEKILDLADKLIKSTGYEEISLTSLSTCDYS QIEDLVKKLIEKYKDKGVGVSIPSTRVDAVSINLLKEIQKVRKTGLTLAPEAGTQRLRDVINKGITEENILEATKEAFSA GWTNVKLYFMIGLPTETMEDVEGIVDLAYKIVDNYKEVKGNVKNLKVTISTSTFVPKPFTPFQWTAQNSIKEIMEKQDLL KKKLKSKVLKYNWHNPYMSFLEAVISRGDRKVGKAIIKAWEKGCKFDGWEEYFNYDKWEKAFKEAGVNPHFYANRERSLE EVFPWDVIDVGVDKRYLIREYKKSQEGRITPDCRLYCTGCGVKDFDEGVVCFEAPQK
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 71258; Mature: 71258
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLKDKIDALLMKVSKPTRYTGGELNSSIKNPEEVKVRFAFAFPDVYEVGMSHLGLRIL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHH YHLLNKREDVYCERVFAPWLDMEKLMRENNIPLFSLETKTPLDKFDFIGFTLQYELSYTN HHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCHHHCEEEEEEEEECHHH VINMLNLAGIPILSRERKGLPFVIAGGPCAYNPAPLSDVIDFFVMGEGEEVINEIIDAYI HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH DWKKKRGEREEFLQIVSQIKGVYVPKYYIEVYNQDGTIKEIRTIKKGVPEKVKKRIVKDF HHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHH ENVYHPEEQIVPFMDIVHDRIMLEIFRGCTRGCRFCQAGMIYRPVREKSKEKILDLADKL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IKSTGYEEISLTSLSTCDYSQIEDLVKKLIEKYKDKGVGVSIPSTRVDAVSINLLKEIQK HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHH VRKTGLTLAPEAGTQRLRDVINKGITEENILEATKEAFSAGWTNVKLYFMIGLPTETMED HHHCCCEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHH VEGIVDLAYKIVDNYKEVKGNVKNLKVTISTSTFVPKPFTPFQWTAQNSIKEIMEKQDLL HHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH KKKLKSKVLKYNWHNPYMSFLEAVISRGDRKVGKAIIKAWEKGCKFDGWEEYFNYDKWEK HHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHH AFKEAGVNPHFYANRERSLEEVFPWDVIDVGVDKRYLIREYKKSQEGRITPDCRLYCTGC HHHHCCCCCCEECCCCCCHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECC GVKDFDEGVVCFEAPQK CCCCCCCCEEEECCCCC >Mature Secondary Structure MNNLKDKIDALLMKVSKPTRYTGGELNSSIKNPEEVKVRFAFAFPDVYEVGMSHLGLRIL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHH YHLLNKREDVYCERVFAPWLDMEKLMRENNIPLFSLETKTPLDKFDFIGFTLQYELSYTN HHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCHHHCEEEEEEEEECHHH VINMLNLAGIPILSRERKGLPFVIAGGPCAYNPAPLSDVIDFFVMGEGEEVINEIIDAYI HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH DWKKKRGEREEFLQIVSQIKGVYVPKYYIEVYNQDGTIKEIRTIKKGVPEKVKKRIVKDF HHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHH ENVYHPEEQIVPFMDIVHDRIMLEIFRGCTRGCRFCQAGMIYRPVREKSKEKILDLADKL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IKSTGYEEISLTSLSTCDYSQIEDLVKKLIEKYKDKGVGVSIPSTRVDAVSINLLKEIQK HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHH VRKTGLTLAPEAGTQRLRDVINKGITEENILEATKEAFSAGWTNVKLYFMIGLPTETMED HHHCCCEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHH VEGIVDLAYKIVDNYKEVKGNVKNLKVTISTSTFVPKPFTPFQWTAQNSIKEIMEKQDLL HHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH KKKLKSKVLKYNWHNPYMSFLEAVISRGDRKVGKAIIKAWEKGCKFDGWEEYFNYDKWEK HHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHH AFKEAGVNPHFYANRERSLEEVFPWDVIDVGVDKRYLIREYKKSQEGRITPDCRLYCTGC HHHHCCCCCCEECCCCCCHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECC GVKDFDEGVVCFEAPQK CCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]