| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is dppF [H]
Identifier: 167040428
GI number: 167040428
Start: 1801980
End: 1802960
Strand: Reverse
Name: dppF [H]
Synonym: Teth514_1792
Alternate gene names: 167040428
Gene position: 1802960-1801980 (Counterclockwise)
Preceding gene: 167040429
Following gene: 167040427
Centisome position: 73.37
GC content: 34.05
Gene sequence:
>981_bases ATGAAACAAGTGATAAAAATAGATCATATTAGTAAAATCTTTTCACGAGGGTTTTTTAAAAAACAGCATAAACTTGTTCT CAGTGATATAAATTTAGAAATTTCACAAGGAGATAGATTAGTTATTGTTGGCGAAAGTGGAATGGGCAAAACTACCTTAG CGCGAATTATGGCTAATTTAGAATTGCCTTCTGAAGGTGAAGTTCTTTGGTTTGAAAAAAATATACAGAAACTGAGGGAA AAAGAAAAAAAATTATTAAGAGGTAAAGTACAATATATTCATCAGGACCCTTATGCTTCCTTACATCCGGCTAAAACTAT CTATAAAATAATCGCAGACCCTCTTAGAAATGCTCAAAAAATTAATAGGAAAGAGGTATATGAAAAGACAAAACAATTAC TGGAAAAAGTAGGTTTAACTCCTGCAGAATATTTTTTCAATAAATATCCTCACCACTTATCAGGAGGAGGACGTCAGAGA CTTGCAATTGCAAGGGCTTTAACGACGGAACCTCAAGTGATAATTGCTGATGAACCGATTAGTATGATTGATATGTCATT GAGGGCAGCAATAATTAAACTTTTTAAAGACTTAAATGATTTATACGGTATTGCCGTTATACTTGTTTTGCATGACATTG GAGCAGCAAAATATTTTACCTATGAAAAGGGAGAAATTGCGGTATTGTATGGGGGCAAAATAGTCGAAAAAGGAAAAGGT AGAGAAGTTTTAACTAATCCAGTTCATCCTTATACTAAAGTATTAATAAATTCCAGCCCCATTGCTGACCCTGAAATAGC TAGGAATAGAGTGGTGGAACAATTAAGGTCTTATGAAGTTCCTGTGCGAACACCAGAAAGCAAGGGGTGTCCTTTTGCTC ATGCATGTAATTATTATACAGAAAAGTGCTTAGAGGAAGACCCTCAACTCATTGTTATCGATTCAAGTCATGAAGTAGCA TGTCATGTTTTTAGTAAATAA
Upstream 100 bases:
>100_bases CATGCGATGGAGATATGCAAGAAGGAAAAGCCGCAATTAATTGAGACAGAAAACGGAGCACAAGTAGCATGTTACTTGTA TAAGGAAGGAGGAAGGTGAA
Downstream 100 bases:
>100_bases GGGTGAAAAATATGAAAAATAAATTTTATATGTTTCTTTCAATATTGGTAATAGTACTGGCTCTTATTTGGATAAGTTTT TTTCAAAAAAATGGCGTAGA
Product: oligopeptide/dipeptide ABC transporter ATPase
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKQVIKIDHISKIFSRGFFKKQHKLVLSDINLEISQGDRLVIVGESGMGKTTLARIMANLELPSEGEVLWFEKNIQKLRE KEKKLLRGKVQYIHQDPYASLHPAKTIYKIIADPLRNAQKINRKEVYEKTKQLLEKVGLTPAEYFFNKYPHHLSGGGRQR LAIARALTTEPQVIIADEPISMIDMSLRAAIIKLFKDLNDLYGIAVILVLHDIGAAKYFTYEKGEIAVLYGGKIVEKGKG REVLTNPVHPYTKVLINSSPIADPEIARNRVVEQLRSYEVPVRTPESKGCPFAHACNYYTEKCLEEDPQLIVIDSSHEVA CHVFSK
Sequences:
>Translated_326_residues MKQVIKIDHISKIFSRGFFKKQHKLVLSDINLEISQGDRLVIVGESGMGKTTLARIMANLELPSEGEVLWFEKNIQKLRE KEKKLLRGKVQYIHQDPYASLHPAKTIYKIIADPLRNAQKINRKEVYEKTKQLLEKVGLTPAEYFFNKYPHHLSGGGRQR LAIARALTTEPQVIIADEPISMIDMSLRAAIIKLFKDLNDLYGIAVILVLHDIGAAKYFTYEKGEIAVLYGGKIVEKGKG REVLTNPVHPYTKVLINSSPIADPEIARNRVVEQLRSYEVPVRTPESKGCPFAHACNYYTEKCLEEDPQLIVIDSSHEVA CHVFSK >Mature_326_residues MKQVIKIDHISKIFSRGFFKKQHKLVLSDINLEISQGDRLVIVGESGMGKTTLARIMANLELPSEGEVLWFEKNIQKLRE KEKKLLRGKVQYIHQDPYASLHPAKTIYKIIADPLRNAQKINRKEVYEKTKQLLEKVGLTPAEYFFNKYPHHLSGGGRQR LAIARALTTEPQVIIADEPISMIDMSLRAAIIKLFKDLNDLYGIAVILVLHDIGAAKYFTYEKGEIAVLYGGKIVEKGKG REVLTNPVHPYTKVLINSSPIADPEIARNRVVEQLRSYEVPVRTPESKGCPFAHACNYYTEKCLEEDPQLIVIDSSHEVA CHVFSK
Specific function: Part of the binding-protein-dependent transport system for dipeptides. Probably responsible for energy coupling to the transport system [H]
COG id: COG4608
COG function: function code E; ABC-type oligopeptide transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI42490749, Length=240, Percent_Identity=30, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI171184400, Length=249, Percent_Identity=27.3092369477912, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI116734710, Length=192, Percent_Identity=30.7291666666667, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI255708477, Length=279, Percent_Identity=23.2974910394265, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI42741659, Length=231, Percent_Identity=27.7056277056277, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI156105685, Length=232, Percent_Identity=27.5862068965517, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI148612844, Length=233, Percent_Identity=27.4678111587983, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI9961250, Length=226, Percent_Identity=26.5486725663717, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI4505771, Length=226, Percent_Identity=26.5486725663717, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI9961252, Length=226, Percent_Identity=26.1061946902655, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI21536378, Length=261, Percent_Identity=26.8199233716475, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI215820660, Length=237, Percent_Identity=28.2700421940928, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI20143975, Length=237, Percent_Identity=28.2700421940928, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1787500, Length=295, Percent_Identity=38.9830508474576, Blast_Score=214, Evalue=7e-57, Organism=Escherichia coli, GI1789962, Length=296, Percent_Identity=35.1351351351351, Blast_Score=204, Evalue=9e-54, Organism=Escherichia coli, GI145693107, Length=252, Percent_Identity=40.4761904761905, Blast_Score=184, Evalue=7e-48, Organism=Escherichia coli, GI1787758, Length=315, Percent_Identity=33.015873015873, Blast_Score=182, Evalue=4e-47, Organism=Escherichia coli, GI1789963, Length=301, Percent_Identity=33.8870431893688, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1789891, Length=235, Percent_Identity=32.7659574468085, Blast_Score=155, Evalue=5e-39, Organism=Escherichia coli, GI1787759, Length=313, Percent_Identity=31.9488817891374, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI1788506, Length=259, Percent_Identity=32.4324324324324, Blast_Score=147, Evalue=6e-37, Organism=Escherichia coli, GI48994883, Length=291, Percent_Identity=31.2714776632302, Blast_Score=147, Evalue=8e-37, Organism=Escherichia coli, GI1787547, Length=258, Percent_Identity=32.9457364341085, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1786398, Length=287, Percent_Identity=31.3588850174216, Blast_Score=131, Evalue=7e-32, Organism=Escherichia coli, GI48994997, Length=233, Percent_Identity=32.1888412017167, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI87081834, Length=222, Percent_Identity=32.8828828828829, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI1787029, Length=224, Percent_Identity=33.9285714285714, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787712, Length=267, Percent_Identity=30.3370786516854, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1789873, Length=218, Percent_Identity=30.7339449541284, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1788450, Length=314, Percent_Identity=26.1146496815287, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI87081791, Length=240, Percent_Identity=30.8333333333333, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1788225, Length=251, Percent_Identity=33.0677290836653, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1787548, Length=305, Percent_Identity=25.5737704918033, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1789032, Length=239, Percent_Identity=30.9623430962343, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787089, Length=225, Percent_Identity=32, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1788761, Length=211, Percent_Identity=32.2274881516588, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI1787370, Length=290, Percent_Identity=28.6206896551724, Blast_Score=104, Evalue=7e-24, Organism=Escherichia coli, GI1788644, Length=244, Percent_Identity=30.7377049180328, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1790467, Length=235, Percent_Identity=32.7659574468085, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1786703, Length=216, Percent_Identity=31.9444444444444, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI87081709, Length=258, Percent_Identity=25.968992248062, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1790162, Length=245, Percent_Identity=30.2040816326531, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1786563, Length=264, Percent_Identity=30.3030303030303, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1789890, Length=235, Percent_Identity=28.936170212766, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1786345, Length=228, Percent_Identity=29.3859649122807, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1789586, Length=229, Percent_Identity=28.3842794759825, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789672, Length=234, Percent_Identity=28.6324786324786, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI87082267, Length=236, Percent_Identity=30.9322033898305, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787164, Length=210, Percent_Identity=30.4761904761905, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786319, Length=210, Percent_Identity=30, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786803, Length=224, Percent_Identity=29.0178571428571, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786872, Length=225, Percent_Identity=29.7777777777778, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787105, Length=189, Percent_Identity=33.8624338624339, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1790544, Length=227, Percent_Identity=27.3127753303965, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1787143, Length=234, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788165, Length=213, Percent_Identity=27.2300469483568, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787112, Length=229, Percent_Identity=26.2008733624454, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1790534, Length=218, Percent_Identity=25.6880733944954, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1786698, Length=187, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786654, Length=252, Percent_Identity=26.1904761904762, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786253, Length=217, Percent_Identity=26.2672811059908, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1788053, Length=192, Percent_Identity=28.6458333333333, Blast_Score=68, Evalue=7e-13, Organism=Caenorhabditis elegans, GI193209708, Length=237, Percent_Identity=30.379746835443, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI193202349, Length=231, Percent_Identity=27.7056277056277, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI193208177, Length=272, Percent_Identity=23.5294117647059, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193211015, Length=241, Percent_Identity=24.4813278008299, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193211017, Length=241, Percent_Identity=24.4813278008299, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71992285, Length=225, Percent_Identity=30.6666666666667, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17567265, Length=223, Percent_Identity=26.9058295964126, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI212646699, Length=236, Percent_Identity=24.1525423728814, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17552010, Length=231, Percent_Identity=23.3766233766234, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115535101, Length=231, Percent_Identity=24.6753246753247, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17567269, Length=230, Percent_Identity=25.6521739130435, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17532411, Length=226, Percent_Identity=26.5486725663717, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=244, Percent_Identity=27.0491803278689, Blast_Score=86, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6323217, Length=235, Percent_Identity=25.1063829787234, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319856, Length=222, Percent_Identity=25.2252252252252, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24659289, Length=232, Percent_Identity=27.1551724137931, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI23397593, Length=239, Percent_Identity=29.2887029288703, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI85726357, Length=233, Percent_Identity=26.1802575107296, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI28574744, Length=236, Percent_Identity=27.5423728813559, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI19920532, Length=248, Percent_Identity=27.0161290322581, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24580930, Length=248, Percent_Identity=27.0161290322581, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI85724864, Length=230, Percent_Identity=26.9565217391304, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24580555, Length=230, Percent_Identity=26.9565217391304, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI85816269, Length=230, Percent_Identity=26.9565217391304, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24580553, Length=230, Percent_Identity=26.9565217391304, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI85724858, Length=225, Percent_Identity=28.8888888888889, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI85724856, Length=225, Percent_Identity=28.8888888888889, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI24580547, Length=225, Percent_Identity=28.8888888888889, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI24580551, Length=225, Percent_Identity=28.8888888888889, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI24580549, Length=225, Percent_Identity=28.8888888888889, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI24580545, Length=225, Percent_Identity=28.8888888888889, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 36976; Mature: 36976
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQVIKIDHISKIFSRGFFKKQHKLVLSDINLEISQGDRLVIVGESGMGKTTLARIMANL CCCEEEHHHHHHHHHHHHHHHHHHEEEEECEEEECCCCEEEEECCCCCCHHHHHHHHHHC ELPSEGEVLWFEKNIQKLREKEKKLLRGKVQYIHQDPYASLHPAKTIYKIIADPLRNAQK CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH INRKEVYEKTKQLLEKVGLTPAEYFFNKYPHHLSGGGRQRLAIARALTTEPQVIIADEPI CCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCH SMIDMSLRAAIIKLFKDLNDLYGIAVILVLHDIGAAKYFTYEKGEIAVLYGGKIVEKGKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCEEEEECCEEEECCCC REVLTNPVHPYTKVLINSSPIADPEIARNRVVEQLRSYEVPVRTPESKGCPFAHACNYYT CCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH EKCLEEDPQLIVIDSSHEVACHVFSK HHHHCCCCCEEEEECCCCEEEEEECC >Mature Secondary Structure MKQVIKIDHISKIFSRGFFKKQHKLVLSDINLEISQGDRLVIVGESGMGKTTLARIMANL CCCEEEHHHHHHHHHHHHHHHHHHEEEEECEEEECCCCEEEEECCCCCCHHHHHHHHHHC ELPSEGEVLWFEKNIQKLREKEKKLLRGKVQYIHQDPYASLHPAKTIYKIIADPLRNAQK CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH INRKEVYEKTKQLLEKVGLTPAEYFFNKYPHHLSGGGRQRLAIARALTTEPQVIIADEPI CCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCH SMIDMSLRAAIIKLFKDLNDLYGIAVILVLHDIGAAKYFTYEKGEIAVLYGGKIVEKGKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCEEEEECCEEEECCCC REVLTNPVHPYTKVLINSSPIADPEIARNRVVEQLRSYEVPVRTPESKGCPFAHACNYYT CCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH EKCLEEDPQLIVIDSSHEVACHVFSK HHHHCCCCCEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 8550458 [H]