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The map label for this gene is ydfM [H]

Identifier: 167040411

GI number: 167040411

Start: 1781587

End: 1782468

Strand: Reverse

Name: ydfM [H]

Synonym: Teth514_1774

Alternate gene names: 167040411

Gene position: 1782468-1781587 (Counterclockwise)

Preceding gene: 167040413

Following gene: 167040405

Centisome position: 72.54

GC content: 32.43

Gene sequence:

>882_bases
ATGGAAAGGGAAAAAATAGGAACAAAAGTTTCGTGGATTACTATTTTTATTAGTACTTTCTTGTGTTTGTTTAAGATAAT
AGCAGGGGTTGTAGGTAAAAGTAGTGCTATGATAGCTGATGGAGTGCATACTTTATCGGACATACTAACTACATTTGTTG
TGATATTGGGACTAAAAATTTCTTCAAAGGAAGAAGATGAAAAGCACCCCTATGGTCATGAAAAATTTGAACTCATATTT
GCTAAAGCTATAAGCGTTATTTTAATAATTACAGGTTTTTCAATAGGATATGAAGGTATAAAAAAGTTAATTTTAGGAGA
AATATCCACTCCCGGTAAAATTGCTCTAGTAGCTGCTGCAGCTTCAATAGTTTTAAAAGAGGGGATGTATTGGTATACAA
TAATAATTGCAAGAAAAATAAAAAGTATTTCTATGGAAGCAGATGCTTGGCATCACCGTTCTGATGCGTTTTCTTCAATA
GGAACTTTTATAGGTATATTTGCAGCCAGAATGGGTTATAGATTTTTCGATCCATTGGCAGCTCTTGTTGTTAGCTTTTT
TATCGTAAAGGTAGGGATTGAATTTTATTTAAAAGCAACCAAAGCTTTAGTTGATGAATCGGTCGATAAAGAAACTATTG
AAAAGATAAAAAATATAGTTATGAGTGTTGATGGAGTTAAAGGAATACAAAGCTTGAAAACCAGGGTGTTTGGACACAGG
ATTTATGTTGATTTAGAAATATATGTTGATGAAAGATTAAATGTAAAGGAAGGACATGATATTGCAGAAAAGGTTCACGA
TGCCCTAGAAGGAGAAATAGATAGTATAAAACATTGCATGGTGCATGTTGAGCCAATTAATACCACAACTTTATTCAACT
AA

Upstream 100 bases:

>100_bases
TCAATTGATAATAGATATTATAAAAATATTGTTGAAAATTCTACTACAATCGCATATAATAAGATATACATTATATTTTC
AGTTGAAAGGAAGTAAAAAT

Downstream 100 bases:

>100_bases
ACCTGGAGCATCGATAATAAAGATTTAAGATATAATCTTAAATAATCTAACGATATATCCTATTGAATATCAAAACAACT
CATGCTAATATATAACATGT

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MEREKIGTKVSWITIFISTFLCLFKIIAGVVGKSSAMIADGVHTLSDILTTFVVILGLKISSKEEDEKHPYGHEKFELIF
AKAISVILIITGFSIGYEGIKKLILGEISTPGKIALVAAAASIVLKEGMYWYTIIIARKIKSISMEADAWHHRSDAFSSI
GTFIGIFAARMGYRFFDPLAALVVSFFIVKVGIEFYLKATKALVDESVDKETIEKIKNIVMSVDGVKGIQSLKTRVFGHR
IYVDLEIYVDERLNVKEGHDIAEKVHDALEGEIDSIKHCMVHVEPINTTTLFN

Sequences:

>Translated_293_residues
MEREKIGTKVSWITIFISTFLCLFKIIAGVVGKSSAMIADGVHTLSDILTTFVVILGLKISSKEEDEKHPYGHEKFELIF
AKAISVILIITGFSIGYEGIKKLILGEISTPGKIALVAAAASIVLKEGMYWYTIIIARKIKSISMEADAWHHRSDAFSSI
GTFIGIFAARMGYRFFDPLAALVVSFFIVKVGIEFYLKATKALVDESVDKETIEKIKNIVMSVDGVKGIQSLKTRVFGHR
IYVDLEIYVDERLNVKEGHDIAEKVHDALEGEIDSIKHCMVHVEPINTTTLFN
>Mature_293_residues
MEREKIGTKVSWITIFISTFLCLFKIIAGVVGKSSAMIADGVHTLSDILTTFVVILGLKISSKEEDEKHPYGHEKFELIF
AKAISVILIITGFSIGYEGIKKLILGEISTPGKIALVAAAASIVLKEGMYWYTIIIARKIKSISMEADAWHHRSDAFSSI
GTFIGIFAARMGYRFFDPLAALVVSFFIVKVGIEFYLKATKALVDESVDKETIEKIKNIVMSVDGVKGIQSLKTRVFGHR
IYVDLEIYVDERLNVKEGHDIAEKVHDALEGEIDSIKHCMVHVEPINTTTLFN

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=273, Percent_Identity=24.9084249084249, Blast_Score=92, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI72000060, Length=295, Percent_Identity=23.0508474576271, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI72000062, Length=295, Percent_Identity=23.0508474576271, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI115533508, Length=279, Percent_Identity=22.5806451612903, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115533506, Length=279, Percent_Identity=22.5806451612903, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508155, Length=264, Percent_Identity=23.4848484848485, Blast_Score=68, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6325032, Length=231, Percent_Identity=28.1385281385281, Blast_Score=107, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6323831, Length=237, Percent_Identity=26.5822784810127, Blast_Score=96, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 32590; Mature: 32590

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEREKIGTKVSWITIFISTFLCLFKIIAGVVGKSSAMIADGVHTLSDILTTFVVILGLKI
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
SSKEEDEKHPYGHEKFELIFAKAISVILIITGFSIGYEGIKKLILGEISTPGKIALVAAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
ASIVLKEGMYWYTIIIARKIKSISMEADAWHHRSDAFSSIGTFIGIFAARMGYRFFDPLA
HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ALVVSFFIVKVGIEFYLKATKALVDESVDKETIEKIKNIVMSVDGVKGIQSLKTRVFGHR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEE
IYVDLEIYVDERLNVKEGHDIAEKVHDALEGEIDSIKHCMVHVEPINTTTLFN
EEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHEEEEECCCCCCCC
>Mature Secondary Structure
MEREKIGTKVSWITIFISTFLCLFKIIAGVVGKSSAMIADGVHTLSDILTTFVVILGLKI
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
SSKEEDEKHPYGHEKFELIFAKAISVILIITGFSIGYEGIKKLILGEISTPGKIALVAAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
ASIVLKEGMYWYTIIIARKIKSISMEADAWHHRSDAFSSIGTFIGIFAARMGYRFFDPLA
HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ALVVSFFIVKVGIEFYLKATKALVDESVDKETIEKIKNIVMSVDGVKGIQSLKTRVFGHR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEE
IYVDLEIYVDERLNVKEGHDIAEKVHDALEGEIDSIKHCMVHVEPINTTTLFN
EEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]