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The map label for this gene is yhcC [C]

Identifier: 167040356

GI number: 167040356

Start: 1727610

End: 1728674

Strand: Reverse

Name: yhcC [C]

Synonym: Teth514_1719

Alternate gene names: 167040356

Gene position: 1728674-1727610 (Counterclockwise)

Preceding gene: 167040357

Following gene: 167040355

Centisome position: 70.35

GC content: 30.42

Gene sequence:

>1065_bases
ATGAAAAAAAAGATGTATATAATACCACTTTTTATACCCCATTTAGGTTGTCCTTTTAAGTGTGTTTTTTGCAATCAAAA
TTCAATAACAGGCCAACAACAGGAGATAACAGAAGAATACGTAAGGCAAACCATAGAAACCCATTTAAAAACTCTTCCAA
GTAATGCAGAAATAGAGGTATCTTTTTTTGGTGGAAGTTTTACAGGAATACCACAGGATAAGCAAAATCTCTACTTGGGA
ATTGCGAAAGAATATTTGGACAAAGGCAAAATAGATGCTATTCGTTTGTCTACTCGTCCTGATTATATAGACACCGAGAT
TTTACAAAATCTTAAGAGATACAAAGTTTCAATAATAGAACTTGGAGTACAGTCAATGGATGAAGAAGTGCTTTTAAAAA
GTAGAAGAGGTCATACAAGTGAGGATGTCGTAAAAACTGTGAATCTAATTCGACAGTATGACTTTAAATTAGGATTACAA
ATAATGATAGGACTACCTGGAGATAACTTAGAGAAATCTTTAAATACCGCTTATAAGATTGTGGAGTTGAAACCTGATTT
TGTGAGGATTTATCCTACTTTGGTGATTAAAAATACTTATCTTGAAAGAATGTATAAAGAAGGAAGATTTTTCCCTCTAA
CGTTGCAAGAGGCTGTTGAAATCTCAAAGAAAATGTATATAATTTTTATTAAGAATAATATTGACGTCATTCGTATTGGA
CTTCAAACGACAGAAAATATTAATTACAATAAAGATGTAGTAGCAGGTCCTTTTCATCCTGCGATGGGACAATTAGTTGA
GTCAAGTGTTATTCTTGACATTCTCATAAGGGTATTTGAGGATAAAAATATAAGGAACACAAAGGTTACAATTTTTTCTA
ATGAAAGGCGGATTTCCACAATTATAGGGCAAAAAAAATTCAACAAGTTGTTTTTAGAAAAAAAATACAACGTAAAAATG
GAATTTAAAATATTAAATAGTCTGACTGACGACAAAATAGTTGTTTGTACTGATAAAAAGATTATGCGTATTTCTATAAC
CGATTTTATAAAAAATAATTTTTAA

Upstream 100 bases:

>100_bases
GGATTGGAGATGTAATATTAGGAAAGGGTTATGGTAAAAGTAAAAAAGAAGCTGAGCAAGCTGCGGCTATGGAAGCATTG
ATTAAATTGGGGATATTGAA

Downstream 100 bases:

>100_bases
AAAAATTTTATAAAAAAGAAGGAAATATTGGTTTTTTATCGAATATATAAATATATATCAAATGTATTCATTTTCACAAT
AATGTATGAAGGAGGTTATT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKKKMYIIPLFIPHLGCPFKCVFCNQNSITGQQQEITEEYVRQTIETHLKTLPSNAEIEVSFFGGSFTGIPQDKQNLYLG
IAKEYLDKGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIELGVQSMDEEVLLKSRRGHTSEDVVKTVNLIRQYDFKLGLQ
IMIGLPGDNLEKSLNTAYKIVELKPDFVRIYPTLVIKNTYLERMYKEGRFFPLTLQEAVEISKKMYIIFIKNNIDVIRIG
LQTTENINYNKDVVAGPFHPAMGQLVESSVILDILIRVFEDKNIRNTKVTIFSNERRISTIIGQKKFNKLFLEKKYNVKM
EFKILNSLTDDKIVVCTDKKIMRISITDFIKNNF

Sequences:

>Translated_354_residues
MKKKMYIIPLFIPHLGCPFKCVFCNQNSITGQQQEITEEYVRQTIETHLKTLPSNAEIEVSFFGGSFTGIPQDKQNLYLG
IAKEYLDKGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIELGVQSMDEEVLLKSRRGHTSEDVVKTVNLIRQYDFKLGLQ
IMIGLPGDNLEKSLNTAYKIVELKPDFVRIYPTLVIKNTYLERMYKEGRFFPLTLQEAVEISKKMYIIFIKNNIDVIRIG
LQTTENINYNKDVVAGPFHPAMGQLVESSVILDILIRVFEDKNIRNTKVTIFSNERRISTIIGQKKFNKLFLEKKYNVKM
EFKILNSLTDDKIVVCTDKKIMRISITDFIKNNF
>Mature_354_residues
MKKKMYIIPLFIPHLGCPFKCVFCNQNSITGQQQEITEEYVRQTIETHLKTLPSNAEIEVSFFGGSFTGIPQDKQNLYLG
IAKEYLDKGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIELGVQSMDEEVLLKSRRGHTSEDVVKTVNLIRQYDFKLGLQ
IMIGLPGDNLEKSLNTAYKIVELKPDFVRIYPTLVIKNTYLERMYKEGRFFPLTLQEAVEISKKMYIIFIKNNIDVIRIG
LQTTENINYNKDVVAGPFHPAMGQLVESSVILDILIRVFEDKNIRNTKVTIFSNERRISTIIGQKKFNKLFLEKKYNVKM
EFKILNSLTDDKIVVCTDKKIMRISITDFIKNNF

Specific function: Unknown

COG id: COG1243

COG function: function code KB; Histone acetyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Homo sapiens, GI23510283, Length=245, Percent_Identity=26.9387755102041, Blast_Score=85, Evalue=9e-17,
Organism=Escherichia coli, GI2367204, Length=212, Percent_Identity=24.5283018867925, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI133955098, Length=174, Percent_Identity=28.735632183908, Blast_Score=85, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6325171, Length=190, Percent_Identity=27.3684210526316, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI19920684, Length=250, Percent_Identity=25.6, Blast_Score=75, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR006638
- InterPro:   IPR005910
- InterPro:   IPR007197 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 41062; Mature: 41062

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKMYIIPLFIPHLGCPFKCVFCNQNSITGQQQEITEEYVRQTIETHLKTLPSNAEIEV
CCCEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
SFFGGSFTGIPQDKQNLYLGIAKEYLDKGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIE
EEECCEECCCCCCCCCEEEEEHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHEE
LGVQSMDEEVLLKSRRGHTSEDVVKTVNLIRQYDFKLGLQIMIGLPGDNLEKSLNTAYKI
CCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCEECEEEEEECCCCHHHHHHHHHEEE
VELKPDFVRIYPTLVIKNTYLERMYKEGRFFPLTLQEAVEISKKMYIIFIKNNIDVIRIG
EEECCCEEEEEEHEEEEHHHHHHHHHCCCEEEEEHHHHHHHCCEEEEEEEECCCEEEEEE
LQTTENINYNKDVVAGPFHPAMGQLVESSVILDILIRVFEDKNIRNTKVTIFSNERRIST
EEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEHH
IIGQKKFNKLFLEKKYNVKMEFKILNSLTDDKIVVCTDKKIMRISITDFIKNNF
HHHHHHHHHHHHEECCCEEEEEEEECCCCCCEEEEEECCEEEEEEEHHHHCCCC
>Mature Secondary Structure
MKKKMYIIPLFIPHLGCPFKCVFCNQNSITGQQQEITEEYVRQTIETHLKTLPSNAEIEV
CCCEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
SFFGGSFTGIPQDKQNLYLGIAKEYLDKGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIE
EEECCEECCCCCCCCCEEEEEHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHEE
LGVQSMDEEVLLKSRRGHTSEDVVKTVNLIRQYDFKLGLQIMIGLPGDNLEKSLNTAYKI
CCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCEECEEEEEECCCCHHHHHHHHHEEE
VELKPDFVRIYPTLVIKNTYLERMYKEGRFFPLTLQEAVEISKKMYIIFIKNNIDVIRIG
EEECCCEEEEEEHEEEEHHHHHHHHHCCCEEEEEHHHHHHHCCEEEEEEEECCCEEEEEE
LQTTENINYNKDVVAGPFHPAMGQLVESSVILDILIRVFEDKNIRNTKVTIFSNERRIST
EEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEHH
IIGQKKFNKLFLEKKYNVKMEFKILNSLTDDKIVVCTDKKIMRISITDFIKNNF
HHHHHHHHHHHHEECCCEEEEEEEECCCCCCEEEEEECCEEEEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]