| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is spoVS [H]
Identifier: 167040355
GI number: 167040355
Start: 1727244
End: 1727504
Strand: Reverse
Name: spoVS [H]
Synonym: Teth514_1718
Alternate gene names: 167040355
Gene position: 1727504-1727244 (Counterclockwise)
Preceding gene: 167040356
Following gene: 167040354
Centisome position: 70.3
GC content: 42.53
Gene sequence:
>261_bases GTGGAGGTTCTAAAAGTATCAGCTAAATCTAAACCTAAGTCTGTAGCAGGTGCATTAGCAGCCGTCTTAAGAGAAAAATC TTCAGCAGAAATTCAGGCGGTTGGGGCAGGTGCAGTAAATCAAGCGGTTAAGGCTATTGCAATAGCAAGGGGGTTTGTGG CGCCAAATGGCATAGACTTAATTGCGATTCCTGCCTTTTCAGAGATTGAGATAGACGGCGAAATGAGGACAGCAATAAAA TTTATTGTAGAACCAAGATAA
Upstream 100 bases:
>100_bases TTTTATAAAAAAGAAGGAAATATTGGTTTTTTATCGAATATATAAATATATATCAAATGTATTCATTTTCACAATAATGT ATGAAGGAGGTTATTTTACA
Downstream 100 bases:
>100_bases TCTAAACCTGCTTTTTAGCAGGTTTTATTTTTATATAGAGGTGATTTTGATGGAAGGCTTCGTTAAAATTTTAGTGTTAG AAAATGAAATAGAAGCGAAA
Product: stage V sporulation protein S
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MEVLKVSAKSKPKSVAGALAAVLREKSSAEIQAVGAGAVNQAVKAIAIARGFVAPNGIDLIAIPAFSEIEIDGEMRTAIK FIVEPR
Sequences:
>Translated_86_residues MEVLKVSAKSKPKSVAGALAAVLREKSSAEIQAVGAGAVNQAVKAIAIARGFVAPNGIDLIAIPAFSEIEIDGEMRTAIK FIVEPR >Mature_86_residues MEVLKVSAKSKPKSVAGALAAVLREKSSAEIQAVGAGAVNQAVKAIAIARGFVAPNGIDLIAIPAFSEIEIDGEMRTAIK FIVEPR
Specific function: Induced early in sporulation under the control of sigma- H. Interferes with sporulation at an early stage. Seems to play a positive role in allowing cells to progress beyond stage V of sporulation [H]
COG id: COG2359
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007347 - ProDom: PD061837 [H]
Pfam domain/function: PF04232 SpoVS [H]
EC number: NA
Molecular weight: Translated: 8902; Mature: 8902
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVLKVSAKSKPKSVAGALAAVLREKSSAEIQAVGAGAVNQAVKAIAIARGFVAPNGIDL CCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCE IAIPAFSEIEIDGEMRTAIKFIVEPR EEECCCCEEEECCHHHHEEEEEECCC >Mature Secondary Structure MEVLKVSAKSKPKSVAGALAAVLREKSSAEIQAVGAGAVNQAVKAIAIARGFVAPNGIDL CCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCE IAIPAFSEIEIDGEMRTAIKFIVEPR EEECCCCEEEECCHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7559352; 9384377 [H]