Click here to switch to the map view.

The map label for this gene is ftsY [H]

Identifier: 167040352

GI number: 167040352

Start: 1722376

End: 1723335

Strand: Reverse

Name: ftsY [H]

Synonym: Teth514_1715

Alternate gene names: 167040352

Gene position: 1723335-1722376 (Counterclockwise)

Preceding gene: 167040353

Following gene: 167040351

Centisome position: 70.13

GC content: 32.5

Gene sequence:

>960_bases
ATGCTTAATTTTTTTGACAAATCTAAAAAAGAATCCGAAACTGCTGAAGAAAAAAAAGGTTTTTTTCAAAAGATTAAAGA
AGGACTTTTAAAAACAAGAGAAAATTTGACTTCTAAAATAGATAGTATTGTTACAATAGGTAGAAAAATTGACGAAGAAC
TTTTGGAAGAATTAGAAGAGATTTTAATTTTAGCTGATATAGGTATTAGTACTACTTCTAAGATTATAGAAGGAATACGT
CAAAAGGCAAAAGAAAGAAAGATTTATGATGCATCTCAAATAAAAGAACTTTTAGCTGAAGAAGTTTATGAAATTTTGCA
AAAGGATGTAGAACCTTTTACCTTGACTTCTCCTATGGTGATATTGAACGTTGGGGTAAATGGAGTAGGAAAGACTACTA
CAATTGGAAAATTAGCTTATTTGTACAAAAAAGAAGGCAAAAAAGTTATGCTAGCAGCAGGTGATACTTTTAGAGCTGCA
GCTATTGACCAGTTAGAAATATGGGCAGAGAGAGTTAACTGTCCAATTATCAAACACCAAGAAGGCTCAGATCCAGCTTC
TGTTATTTTTGATGGCATTCAAGCCTCAAAAGCAAGGGGAATAGATATACTTATTTGTGATACTGCAGGTAGACTCCACA
ATAAAAAGAATCTGATGGAGGAATTGAGGAAAATTCGCAAAGTTATAGATAGGGAATATCCTGAAGCGAGGGTTGAAACC
TTTTTAGTTTTAGATGCTACAACTGGTCAAAATGCTCTTCAACAGGCGAAAATATTTAAAGAAGTTTCTGATATAACCGG
TATTGTACTTACCAAATTAGATGGAACGGCAAAAGGTGGAATTGTTGTAGCTATAAAATCAGAATTAAATGTACCTATAA
GATATATAGGAATTGGGGAAGGAATAGAGGATTTGCAAGCTTTTGATGCAAAATCTTTCGTTTCTGCTATTTTTCAGTAA

Upstream 100 bases:

>100_bases
GCAGATGCGATATACGGTGTAACAATGCAAGAAAAAGGAGTTTCCAAATTGTTATCCCTTAAACTAAATACTGACGACAA
AATAGGAGGCTTGGTAAAAC

Downstream 100 bases:

>100_bases
ATTAAATCGCAAAAAAATGAAAAAACACAGCTTGACAAAAAGCAGCCCTTCATATAAAATCTTAATGTAAAGGTTAGGAC
CTTAACGGGTGGGATTTTTG

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MLNFFDKSKKESETAEEKKGFFQKIKEGLLKTRENLTSKIDSIVTIGRKIDEELLEELEEILILADIGISTTSKIIEGIR
QKAKERKIYDASQIKELLAEEVYEILQKDVEPFTLTSPMVILNVGVNGVGKTTTIGKLAYLYKKEGKKVMLAAGDTFRAA
AIDQLEIWAERVNCPIIKHQEGSDPASVIFDGIQASKARGIDILICDTAGRLHNKKNLMEELRKIRKVIDREYPEARVET
FLVLDATTGQNALQQAKIFKEVSDITGIVLTKLDGTAKGGIVVAIKSELNVPIRYIGIGEGIEDLQAFDAKSFVSAIFQ

Sequences:

>Translated_319_residues
MLNFFDKSKKESETAEEKKGFFQKIKEGLLKTRENLTSKIDSIVTIGRKIDEELLEELEEILILADIGISTTSKIIEGIR
QKAKERKIYDASQIKELLAEEVYEILQKDVEPFTLTSPMVILNVGVNGVGKTTTIGKLAYLYKKEGKKVMLAAGDTFRAA
AIDQLEIWAERVNCPIIKHQEGSDPASVIFDGIQASKARGIDILICDTAGRLHNKKNLMEELRKIRKVIDREYPEARVET
FLVLDATTGQNALQQAKIFKEVSDITGIVLTKLDGTAKGGIVVAIKSELNVPIRYIGIGEGIEDLQAFDAKSFVSAIFQ
>Mature_319_residues
MLNFFDKSKKESETAEEKKGFFQKIKEGLLKTRENLTSKIDSIVTIGRKIDEELLEELEEILILADIGISTTSKIIEGIR
QKAKERKIYDASQIKELLAEEVYEILQKDVEPFTLTSPMVILNVGVNGVGKTTTIGKLAYLYKKEGKKVMLAAGDTFRAA
AIDQLEIWAERVNCPIIKHQEGSDPASVIFDGIQASKARGIDILICDTAGRLHNKKNLMEELRKIRKVIDREYPEARVET
FLVLDATTGQNALQQAKIFKEVSDITGIVLTKLDGTAKGGIVVAIKSELNVPIRYIGIGEGIEDLQAFDAKSFVSAIFQ

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=292, Percent_Identity=32.1917808219178, Blast_Score=145, Evalue=7e-35,
Organism=Homo sapiens, GI226371618, Length=227, Percent_Identity=35.6828193832599, Blast_Score=138, Evalue=6e-33,
Organism=Homo sapiens, GI295424842, Length=350, Percent_Identity=27.4285714285714, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI23308697, Length=350, Percent_Identity=27.4285714285714, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=34.8148148148148, Blast_Score=86, Evalue=6e-17,
Organism=Escherichia coli, GI1789874, Length=303, Percent_Identity=55.7755775577558, Blast_Score=319, Evalue=1e-88,
Organism=Escherichia coli, GI1788963, Length=308, Percent_Identity=30.8441558441558, Blast_Score=159, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17539958, Length=271, Percent_Identity=31.3653136531365, Blast_Score=141, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI193206261, Length=297, Percent_Identity=27.9461279461279, Blast_Score=107, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=307, Percent_Identity=36.1563517915309, Blast_Score=165, Evalue=8e-42,
Organism=Drosophila melanogaster, GI17647949, Length=279, Percent_Identity=33.6917562724014, Blast_Score=144, Evalue=6e-35,
Organism=Drosophila melanogaster, GI24641198, Length=302, Percent_Identity=28.476821192053, Blast_Score=104, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 35476; Mature: 35476

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFFDKSKKESETAEEKKGFFQKIKEGLLKTRENLTSKIDSIVTIGRKIDEELLEELEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILILADIGISTTSKIIEGIRQKAKERKIYDASQIKELLAEEVYEILQKDVEPFTLTSPMV
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCEE
ILNVGVNGVGKTTTIGKLAYLYKKEGKKVMLAAGDTFRAAAIDQLEIWAERVNCPIIKHQ
EEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEECC
EGSDPASVIFDGIQASKARGIDILICDTAGRLHNKKNLMEELRKIRKVIDREYPEARVET
CCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHCCCCCHHHHEE
FLVLDATTGQNALQQAKIFKEVSDITGIVLTKLDGTAKGGIVVAIKSELNVPIRYIGIGE
EEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCEEEEECCC
GIEDLQAFDAKSFVSAIFQ
CHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNFFDKSKKESETAEEKKGFFQKIKEGLLKTRENLTSKIDSIVTIGRKIDEELLEELEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILILADIGISTTSKIIEGIRQKAKERKIYDASQIKELLAEEVYEILQKDVEPFTLTSPMV
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCEE
ILNVGVNGVGKTTTIGKLAYLYKKEGKKVMLAAGDTFRAAAIDQLEIWAERVNCPIIKHQ
EEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEECC
EGSDPASVIFDGIQASKARGIDILICDTAGRLHNKKNLMEELRKIRKVIDREYPEARVET
CCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHCCCCCHHHHEE
FLVLDATTGQNALQQAKIFKEVSDITGIVLTKLDGTAKGGIVVAIKSELNVPIRYIGIGE
EEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCEEEEECCC
GIEDLQAFDAKSFVSAIFQ
CHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]