Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

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The map label for this gene is 167040351

Identifier: 167040351

GI number: 167040351

Start: 1721923

End: 1722276

Strand: Reverse

Name: 167040351

Synonym: Teth514_1714

Alternate gene names: NA

Gene position: 1722276-1721923 (Counterclockwise)

Preceding gene: 167040352

Following gene: 167040350

Centisome position: 70.09

GC content: 31.64

Gene sequence:

>354_bases
GTGGATGATGATTTTTTATTTATGACTCTTTTGTATGATTTTTATGGTGCTTTGCTTACAGATAAGCAAAGAGAAATTTT
TGAGATGTACTATTTAAATGATTATTCTCTTGGAGAAATTTCCGAACTTTTGGATATCTCACGGCAGGGAGTTTATGACA
CTTTAAAAAGAGCAGAAAGCTCGTTAGAGTTTTTTGAGGAAAAGTTAGGGTTGGTAAAAAGACATCAAGAAATAATGAAT
AAACTGGATAAGATAAAAAAGGGCATTGAAATAATACGGGAAAGAGAAAGAGACCCAGAAATTTTAAAAATTATTGAGGA
GATAGCTCGTGAAATAGAAGAGCTAAATCTGTAG

Upstream 100 bases:

>100_bases
AATTAAATCGCAAAAAAATGAAAAAACACAGCTTGACAAAAAGCAGCCCTTCATATAAAATCTTAATGTAAAGGTTAGGA
CCTTAACGGGTGGGATTTTT

Downstream 100 bases:

>100_bases
GAGGTAAATTTTAATGGCTTTTGAAAGCCTATCTGAAAGGCTGCAGGAAATCTTTAAAAAGTTAAGAGGAAAAGGAAAAC
TCACAGAAAAAGATATAAAA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MDDDFLFMTLLYDFYGALLTDKQREIFEMYYLNDYSLGEISELLDISRQGVYDTLKRAESSLEFFEEKLGLVKRHQEIMN
KLDKIKKGIEIIRERERDPEILKIIEEIAREIEELNL

Sequences:

>Translated_117_residues
MDDDFLFMTLLYDFYGALLTDKQREIFEMYYLNDYSLGEISELLDISRQGVYDTLKRAESSLEFFEEKLGLVKRHQEIMN
KLDKIKKGIEIIRERERDPEILKIIEEIAREIEELNL
>Mature_117_residues
MDDDFLFMTLLYDFYGALLTDKQREIFEMYYLNDYSLGEISELLDISRQGVYDTLKRAESSLEFFEEKLGLVKRHQEIMN
KLDKIKKGIEIIRERERDPEILKIIEEIAREIEELNL

Specific function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein [H]

COG id: COG2739

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0122 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013324
- InterPro:   IPR007394
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04297 UPF0122 [H]

EC number: NA

Molecular weight: Translated: 14074; Mature: 14074

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDDFLFMTLLYDFYGALLTDKQREIFEMYYLNDYSLGEISELLDISRQGVYDTLKRAES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLEFFEEKLGLVKRHQEIMNKLDKIKKGIEIIRERERDPEILKIIEEIAREIEELNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDDDFLFMTLLYDFYGALLTDKQREIFEMYYLNDYSLGEISELLDISRQGVYDTLKRAES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLEFFEEKLGLVKRHQEIMNKLDKIKKGIEIIRERERDPEILKIIEEIAREIEELNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA