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The map label for this gene is rbgA [H]

Identifier: 167040344

GI number: 167040344

Start: 1717536

End: 1718369

Strand: Reverse

Name: rbgA [H]

Synonym: Teth514_1707

Alternate gene names: 167040344

Gene position: 1718369-1717536 (Counterclockwise)

Preceding gene: 167040345

Following gene: 167040343

Centisome position: 69.93

GC content: 32.73

Gene sequence:

>834_bases
ATGATACAGTGGTATCCTGGACATATGGCAAAATCTAAAAAGGAGATAGTTTCTAACCTTAAGTTAGTAGATGTAGTATA
CGAAATAGTAGATGCGAGAATACCTAAAAGTAGTAGAAACCCAGATATTGATGATATTGTAAAAAATAAAAAAAGACTTA
TACTCCTAAATAAAGCTGATTTAGCAGATGATGTAATTACGGATTTATGGATAGAATATTTCAAGGGAAAGGGAATAGAA
GCGGTAAAAGTTAATTCAATTACAGGATTTGGCCTTAAAGAGATAAATGAAGCAACTAACAAAGTTTGTCAAGATATTTT
GGAGAAGAAAAAGCAAAAAGGAATGATTCCAAGGCTGAGAGGAATGATTGTAGGTGTTCCAAATGTTGGTAAATCTACTT
TTATTAATAAATTAATCGGCAGTAAAAGGGCAAAGACTGGCGATAAGCCGGGGGTGACAAGGGCTTTGCATTGGATAAAA
ACTCCTTATTTCGACCTTTTGGACACTCCTGGCATACTCTGGCCAAAATTTGACGATAAAAAAGTAGGAATTATGTTAGC
AATTACTGGAGCTATAAAAGATGAAATATTGGACATAGAAGAAATAGCATTAAACTTAGTAGCAATCTTAAAAAAGTATT
ATCCCAATTATTTGATGTCCCGCTATAAAATTGATAAAATAGTAAATGAGGATTTTGAACTTTTAAAAGAAATAGGTAAA
AAAAGAGGTTGTTTACTTGCAAGGGGAGAAGTAGATACATTAAAAACTTCTCATATTTTGTTGGAGGATTTTCGAAAGGG
GAAATTGGGGAGGATTTCTCTGGAAAGACCATAA

Upstream 100 bases:

>100_bases
ATTATTTGAGAAAGAGAGTAGGAAAAGCTGCTACAAAGATAAAGGAATTAATGTAAAAAGGGGTTATAAACCCCTTTTTT
AAATATGTGGAGGAATTGAT

Downstream 100 bases:

>100_bases
GGGGGATTTGATTTTTATGCTTTCTAAAGTAAAAAGTATGGCAGTCTTAGGGATAAATGCCTATGTGGTAGAGGTGGAGG
TAGATTTATCTACAGGAATT

Product: HSR1-like GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MIQWYPGHMAKSKKEIVSNLKLVDVVYEIVDARIPKSSRNPDIDDIVKNKKRLILLNKADLADDVITDLWIEYFKGKGIE
AVKVNSITGFGLKEINEATNKVCQDILEKKKQKGMIPRLRGMIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRALHWIK
TPYFDLLDTPGILWPKFDDKKVGIMLAITGAIKDEILDIEEIALNLVAILKKYYPNYLMSRYKIDKIVNEDFELLKEIGK
KRGCLLARGEVDTLKTSHILLEDFRKGKLGRISLERP

Sequences:

>Translated_277_residues
MIQWYPGHMAKSKKEIVSNLKLVDVVYEIVDARIPKSSRNPDIDDIVKNKKRLILLNKADLADDVITDLWIEYFKGKGIE
AVKVNSITGFGLKEINEATNKVCQDILEKKKQKGMIPRLRGMIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRALHWIK
TPYFDLLDTPGILWPKFDDKKVGIMLAITGAIKDEILDIEEIALNLVAILKKYYPNYLMSRYKIDKIVNEDFELLKEIGK
KRGCLLARGEVDTLKTSHILLEDFRKGKLGRISLERP
>Mature_277_residues
MIQWYPGHMAKSKKEIVSNLKLVDVVYEIVDARIPKSSRNPDIDDIVKNKKRLILLNKADLADDVITDLWIEYFKGKGIE
AVKVNSITGFGLKEINEATNKVCQDILEKKKQKGMIPRLRGMIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRALHWIK
TPYFDLLDTPGILWPKFDDKKVGIMLAITGAIKDEILDIEEIALNLVAILKKYYPNYLMSRYKIDKIVNEDFELLKEIGK
KRGCLLARGEVDTLKTSHILLEDFRKGKLGRISLERP

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=294, Percent_Identity=31.2925170068027, Blast_Score=138, Evalue=6e-33,
Organism=Homo sapiens, GI7019419, Length=256, Percent_Identity=28.125, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI296317324, Length=187, Percent_Identity=28.3422459893048, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI9506611, Length=187, Percent_Identity=28.3422459893048, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193211047, Length=218, Percent_Identity=28.4403669724771, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI25143545, Length=279, Percent_Identity=29.0322580645161, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17534827, Length=273, Percent_Identity=28.9377289377289, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI115535155, Length=279, Percent_Identity=29.0322580645161, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI71982363, Length=181, Percent_Identity=35.3591160220994, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI32563985, Length=244, Percent_Identity=25.4098360655738, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71990926, Length=246, Percent_Identity=25.609756097561, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI32563983, Length=246, Percent_Identity=25.609756097561, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324381, Length=252, Percent_Identity=26.1904761904762, Blast_Score=72, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6320842, Length=278, Percent_Identity=31.294964028777, Blast_Score=72, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6321339, Length=301, Percent_Identity=28.2392026578073, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI85815858, Length=302, Percent_Identity=29.1390728476821, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI28572990, Length=282, Percent_Identity=26.9503546099291, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI19922460, Length=254, Percent_Identity=27.5590551181102, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 31445; Mature: 31445

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQWYPGHMAKSKKEIVSNLKLVDVVYEIVDARIPKSSRNPDIDDIVKNKKRLILLNKAD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEECCH
LADDVITDLWIEYFKGKGIEAVKVNSITGFGLKEINEATNKVCQDILEKKKQKGMIPRLR
HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
GMIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRALHWIKTPYFDLLDTPGILWPKFDDK
CEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCC
KVGIMLAITGAIKDEILDIEEIALNLVAILKKYYPNYLMSRYKIDKIVNEDFELLKEIGK
CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRGCLLARGEVDTLKTSHILLEDFRKGKLGRISLERP
HCCCEEECCCHHHHHHHHHHHHHHCCCCCCCEECCCC
>Mature Secondary Structure
MIQWYPGHMAKSKKEIVSNLKLVDVVYEIVDARIPKSSRNPDIDDIVKNKKRLILLNKAD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEECCH
LADDVITDLWIEYFKGKGIEAVKVNSITGFGLKEINEATNKVCQDILEKKKQKGMIPRLR
HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
GMIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRALHWIKTPYFDLLDTPGILWPKFDDK
CEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCC
KVGIMLAITGAIKDEILDIEEIALNLVAILKKYYPNYLMSRYKIDKIVNEDFELLKEIGK
CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRGCLLARGEVDTLKTSHILLEDFRKGKLGRISLERP
HCCCEEECCCHHHHHHHHHHHHHHCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]