Click here to switch to the map view.

The map label for this gene is fliF [H]

Identifier: 167040330

GI number: 167040330

Start: 1703808

End: 1705319

Strand: Reverse

Name: fliF [H]

Synonym: Teth514_1693

Alternate gene names: 167040330

Gene position: 1705319-1703808 (Counterclockwise)

Preceding gene: 167040331

Following gene: 167040329

Centisome position: 69.4

GC content: 34.66

Gene sequence:

>1512_bases
ATGCCAGACTTCATTGCCAATTTTAGAGAACAACTGACAAACTTTTGGAATAAGTTTGATAAGAAACAAAAGATACAGTT
AGGAATTATTGCTATTTTACTTTTTATAGGCATTTCTTTATTAGTTTACATAGTTAATAGGCCTAATTATGTAGTTTTAT
ATTCAGATCTAAGTATAAAAGATGCAGGAGCGGTAGTTGAAAAATTAAAAACCGAATTCAAGATTCCATATAAAATATCG
AACGATGGGACGACAATTTTAGTTCCTGCACAATACAAAGATGAGGTGAGGATGAAACTTGCGACAGAAGGAATCCCACA
AGGGGGATTTAGCTTTCAAGACGCTATGAATAACTCCCTTGCTACAACAGACCAAGAGAGAAGACAAAAGTATTTGTATT
TTCTACAAAATGAAATACAAAATTCTCTAAAAACTATAGATGGAGTGCAAGATGCTATTGTCAATATCGTAGTACCTGAT
CAAAATGCCTTTGTACTTTCAAATACTACTAATCAAGCTACAGCGGCTGTGATGCTAACTTTAAAGCCAGGTGTGACTTT
ATCCTCTTCGCAAGTCAAGGGAATCATAGATTTTGTATCTAAGAGCGTAGAAGGTTTAAAACCTGAAAATGTTACTGTAA
TTGATAATAATGGTAAAATTCTTACTGCAGAAAGTGATACTACTGCTGAAAATGCTAATACTCAGTTTACTCTTCAAAAA
AAAGTTCAAGAAGACTTACAAAACAGCCTTCAAACATTGTTAGAACAAGTGTTTGGACCAGGTAATGTAGTTGTAAGAGC
AAATGTTACTTTAAATTTTGATAAAAAGACGCAGGATACTATAGAGTATTTGCCTGTTCAAGGGAATGACAATAAAGGAA
TTGTAAGGAGTATACAAGAGCTTAAAGAAAAAGCCACAGGTACACAAGGTGGAAGCTCACCAGGTACTGCGTCAAATAAT
CCTCCTGTAGCTTCAACGACTGGTAATGGTACTTCTGATTACAGTAGAACAGAAACTACTATAAATTATGAAATAAATCA
AATTAAGACAAGTCTTGTTCAAGCACAAGGCAAGATTGAAAATATTTCAATAGCCGTCGTTGTAAATCAAAATTTAAATA
ATTCAATGAAACAACAAATTGCTGACTTGGTTACAAAAGCTGCAGGAGGGGATTCTCTTGTACAAGTATCGGTTCAAGGA
ATGCAGTTTAACCAAGACCTGTTAAAAACAATGCAGCAGCAGGCAAAAGCTTCAAAAGGAGTACCAGTATATGTGTGGGC
TATATTAGCGGCTTTAGTGTTAGGAGGCGGACTGTTCCTTATTATGATGAGAAGGAAGAAAAAAGAAACCTCTTTAACTA
CAGCTGAACAGGAGGTCTTAGCTACTGTAGAGCCTACTTATGTGATAGATTTCTCTGATAAGGACGAAAAGAAAAAACAG
ATAGAAAAACTTATAAAAGAAAAGCCGGATATTGTTGTTCAGATTATTAGGACATGGCTTAATGAAGAGTAG

Upstream 100 bases:

>100_bases
ACTGCAGCTTACAATTCAAATAAAAAATAAAGTGCTGGAGGCCTATCAGGAAATAATGAGAATGCCATTGTAATGTCTTT
AATTGAAATGAGGTGAATTA

Downstream 100 bases:

>100_bases
GTGGTGTTGTTATGGCGAGAGGTGCACTCACAGGCAGGCAAAAAAGTGCAATGCTTCTCATTGCGTTAGGGCCCGAGCTT
TCAGCTCAAATATATAAACA

Product: flagellar M-ring protein FliF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MPDFIANFREQLTNFWNKFDKKQKIQLGIIAILLFIGISLLVYIVNRPNYVVLYSDLSIKDAGAVVEKLKTEFKIPYKIS
NDGTTILVPAQYKDEVRMKLATEGIPQGGFSFQDAMNNSLATTDQERRQKYLYFLQNEIQNSLKTIDGVQDAIVNIVVPD
QNAFVLSNTTNQATAAVMLTLKPGVTLSSSQVKGIIDFVSKSVEGLKPENVTVIDNNGKILTAESDTTAENANTQFTLQK
KVQEDLQNSLQTLLEQVFGPGNVVVRANVTLNFDKKTQDTIEYLPVQGNDNKGIVRSIQELKEKATGTQGGSSPGTASNN
PPVASTTGNGTSDYSRTETTINYEINQIKTSLVQAQGKIENISIAVVVNQNLNNSMKQQIADLVTKAAGGDSLVQVSVQG
MQFNQDLLKTMQQQAKASKGVPVYVWAILAALVLGGGLFLIMMRRKKKETSLTTAEQEVLATVEPTYVIDFSDKDEKKKQ
IEKLIKEKPDIVVQIIRTWLNEE

Sequences:

>Translated_503_residues
MPDFIANFREQLTNFWNKFDKKQKIQLGIIAILLFIGISLLVYIVNRPNYVVLYSDLSIKDAGAVVEKLKTEFKIPYKIS
NDGTTILVPAQYKDEVRMKLATEGIPQGGFSFQDAMNNSLATTDQERRQKYLYFLQNEIQNSLKTIDGVQDAIVNIVVPD
QNAFVLSNTTNQATAAVMLTLKPGVTLSSSQVKGIIDFVSKSVEGLKPENVTVIDNNGKILTAESDTTAENANTQFTLQK
KVQEDLQNSLQTLLEQVFGPGNVVVRANVTLNFDKKTQDTIEYLPVQGNDNKGIVRSIQELKEKATGTQGGSSPGTASNN
PPVASTTGNGTSDYSRTETTINYEINQIKTSLVQAQGKIENISIAVVVNQNLNNSMKQQIADLVTKAAGGDSLVQVSVQG
MQFNQDLLKTMQQQAKASKGVPVYVWAILAALVLGGGLFLIMMRRKKKETSLTTAEQEVLATVEPTYVIDFSDKDEKKKQ
IEKLIKEKPDIVVQIIRTWLNEE
>Mature_502_residues
PDFIANFREQLTNFWNKFDKKQKIQLGIIAILLFIGISLLVYIVNRPNYVVLYSDLSIKDAGAVVEKLKTEFKIPYKISN
DGTTILVPAQYKDEVRMKLATEGIPQGGFSFQDAMNNSLATTDQERRQKYLYFLQNEIQNSLKTIDGVQDAIVNIVVPDQ
NAFVLSNTTNQATAAVMLTLKPGVTLSSSQVKGIIDFVSKSVEGLKPENVTVIDNNGKILTAESDTTAENANTQFTLQKK
VQEDLQNSLQTLLEQVFGPGNVVVRANVTLNFDKKTQDTIEYLPVQGNDNKGIVRSIQELKEKATGTQGGSSPGTASNNP
PVASTTGNGTSDYSRTETTINYEINQIKTSLVQAQGKIENISIAVVVNQNLNNSMKQQIADLVTKAAGGDSLVQVSVQGM
QFNQDLLKTMQQQAKASKGVPVYVWAILAALVLGGGLFLIMMRRKKKETSLTTAEQEVLATVEPTYVIDFSDKDEKKKQI
EKLIKEKPDIVVQIIRTWLNEE

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=419, Percent_Identity=30.0715990453461, Blast_Score=166, Evalue=4e-42,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 55524; Mature: 55393

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDFIANFREQLTNFWNKFDKKQKIQLGIIAILLFIGISLLVYIVNRPNYVVLYSDLSIK
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
DAGAVVEKLKTEFKIPYKISNDGTTILVPAQYKDEVRMKLATEGIPQGGFSFQDAMNNSL
HHHHHHHHHHHHEECCEEECCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHCCCCC
ATTDQERRQKYLYFLQNEIQNSLKTIDGVQDAIVNIVVPDQNAFVLSNTTNQATAAVMLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEECCCCEEEEECCCCCCEEEEEEE
LKPGVTLSSSQVKGIIDFVSKSVEGLKPENVTVIDNNGKILTAESDTTAENANTQFTLQK
ECCCCEECHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEHH
KVQEDLQNSLQTLLEQVFGPGNVVVRANVTLNFDKKTQDTIEYLPVQGNDNKGIVRSIQE
HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHHEEECCCCCCCHHHHHHHH
LKEKATGTQGGSSPGTASNNPPVASTTGNGTSDYSRTETTINYEINQIKTSLVQAQGKIE
HHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCC
NISIAVVVNQNLNNSMKQQIADLVTKAAGGDSLVQVSVQGMQFNQDLLKTMQQQAKASKG
EEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
VPVYVWAILAALVLGGGLFLIMMRRKKKETSLTTAEQEVLATVEPTYVIDFSDKDEKKKQ
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEECCCCCHHHHH
IEKLIKEKPDIVVQIIRTWLNEE
HHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PDFIANFREQLTNFWNKFDKKQKIQLGIIAILLFIGISLLVYIVNRPNYVVLYSDLSIK
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
DAGAVVEKLKTEFKIPYKISNDGTTILVPAQYKDEVRMKLATEGIPQGGFSFQDAMNNSL
HHHHHHHHHHHHEECCEEECCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHCCCCC
ATTDQERRQKYLYFLQNEIQNSLKTIDGVQDAIVNIVVPDQNAFVLSNTTNQATAAVMLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEECCCCEEEEECCCCCCEEEEEEE
LKPGVTLSSSQVKGIIDFVSKSVEGLKPENVTVIDNNGKILTAESDTTAENANTQFTLQK
ECCCCEECHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEHH
KVQEDLQNSLQTLLEQVFGPGNVVVRANVTLNFDKKTQDTIEYLPVQGNDNKGIVRSIQE
HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHHEEECCCCCCCHHHHHHHH
LKEKATGTQGGSSPGTASNNPPVASTTGNGTSDYSRTETTINYEINQIKTSLVQAQGKIE
HHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCC
NISIAVVVNQNLNNSMKQQIADLVTKAAGGDSLVQVSVQGMQFNQDLLKTMQQQAKASKG
EEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
VPVYVWAILAALVLGGGLFLIMMRRKKKETSLTTAEQEVLATVEPTYVIDFSDKDEKKKQ
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEECCCCCHHHHH
IEKLIKEKPDIVVQIIRTWLNEE
HHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]