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The map label for this gene is frr

Identifier: 167040295

GI number: 167040295

Start: 1675775

End: 1676329

Strand: Reverse

Name: frr

Synonym: Teth514_1658

Alternate gene names: 167040295

Gene position: 1676329-1675775 (Counterclockwise)

Preceding gene: 167040296

Following gene: 167040294

Centisome position: 68.22

GC content: 33.33

Gene sequence:

>555_bases
ATGAGTGATTATTTAAAAGCTAGCGAAGAAAAAATGCAAAAATCTTTGAGCGTTTTAAAAAACGAATTAGCTGCTATAAG
AGCAGGTAGAGCAAATCCTGCACTACTTGACCGAATTATGGTAGATTATTATGGTACTCCAACTCCTCTTAACAGATTAG
CCACCATTACAGCTCCGGAGCCAAGAGTACTAGTTGTACAACCGTGGGATGTTTCAAAAATAAGCGATATTGAAAAAGCA
ATACAGAAATCAGATTTAGGAATTAATCCAGTTTCTGACGGTAAAGTGTTAAGATTAGTTTTTCCTGAATTGACTGAAGA
AAGAAGAAAAGAATTGGTAAAGTTAGTTCATAAAAAAGCAGAAGAGGCAAAAGTAGCAGTAAGGCAAATAAGAAGAGATG
CTAATGATGCTGTAAAAAAAATGGAAAAAAACGGCGAAATTTCGGAAGATGAAAGAAAAAAGAGAGAAGAAGAAATTCAA
AAATTAACTGACAAATATATTAAAGAGATAGACAAAGTGGTGGAAGCTAAAGAAAAGGAGATAATGGAAATTTGA

Upstream 100 bases:

>100_bases
ATAAAATACCAATCATAGTTTTTGACCTTACTACCTACGGAAATATAAAGAAAGTAGTAACAGGAAAAGATATTGGTACA
ATAGTGAAGGAGGTTTAAGT

Downstream 100 bases:

>100_bases
CAGATTATTATAATAATTTTATAGGGATGGATTTACATAAAATAATAGAAAAATTACCTAAGGACTTAAAATTTAACGTT
GTAGAGACAAAATCTATTTT

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSDYLKASEEKMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEPRVLVVQPWDVSKISDIEKA
IQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAKVAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQ
KLTDKYIKEIDKVVEAKEKEIMEI

Sequences:

>Translated_184_residues
MSDYLKASEEKMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEPRVLVVQPWDVSKISDIEKA
IQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAKVAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQ
KLTDKYIKEIDKVVEAKEKEIMEI
>Mature_183_residues
SDYLKASEEKMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEPRVLVVQPWDVSKISDIEKAI
QKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAKVAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQK
LTDKYIKEIDKVVEAKEKEIMEI

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family

Homologues:

Organism=Homo sapiens, GI20270317, Length=174, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI291042689, Length=148, Percent_Identity=28.3783783783784, Blast_Score=68, Evalue=4e-12,
Organism=Escherichia coli, GI1786368, Length=184, Percent_Identity=48.9130434782609, Blast_Score=179, Evalue=9e-47,
Organism=Drosophila melanogaster, GI24661488, Length=173, Percent_Identity=27.1676300578035, Blast_Score=77, Evalue=9e-15,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): RRF_THEP3 (B0K9R3)

Other databases:

- EMBL:   CP000924
- RefSeq:   YP_001665212.1
- ProteinModelPortal:   B0K9R3
- SMR:   B0K9R3
- GeneID:   5875194
- GenomeReviews:   CP000924_GR
- KEGG:   tpd:Teth39_1222
- HOGENOM:   HBG533975
- OMA:   YYGAETP
- ProtClustDB:   PRK00083
- BioCyc:   TPSE340099:TETH39_1222-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00040
- InterPro:   IPR002661
- InterPro:   IPR015998
- PANTHER:   PTHR20982
- PANTHER:   PTHR20982:SF3
- TIGRFAMs:   TIGR00496

Pfam domain/function: PF01765 RRF; SSF55194 Ribosome_recyc_fac

EC number: NA

Molecular weight: Translated: 21080; Mature: 20948

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDYLKASEEKMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHEEEECCC
PRVLVVQPWDVSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKA
CCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
EEAKVAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQKLTDKYIKEIDKVVEAKEKE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMEI
HHCC
>Mature Secondary Structure 
SDYLKASEEKMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHEEEECCC
PRVLVVQPWDVSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKA
CCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
EEAKVAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQKLTDKYIKEIDKVVEAKEKE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMEI
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA