| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is dut
Identifier: 167040273
GI number: 167040273
Start: 1653376
End: 1653822
Strand: Reverse
Name: dut
Synonym: Teth514_1636
Alternate gene names: 167040273
Gene position: 1653822-1653376 (Counterclockwise)
Preceding gene: 167040274
Following gene: 167040272
Centisome position: 67.3
GC content: 35.79
Gene sequence:
>447_bases ATGTCAATAATACTTAAGATTAAAAAAACTGATGATGCTAAAGACTTACCTTTGCCTGCTTATATGAGTGAAGGAGCCGC TGGGATGGATTTATATGCTAATGTTAAAGAGGAAGTCATATTACAGCCTGGCGAAATAAAACTAATTCCAACAGGTATAC AAATTGAACTTCCTCCAAATTTTGAGGCCCAAATAAGGCCAAGAAGTGGCCTAGCTTTAAACTATGGAATAACCCTTTTA AATACTCCTGGCACAATTGATTCTGATTACAGAGGAGAAATAAAATTAATAGTCATCAATTTAGGAAAAGAAGCAGTCAA AATCGCAAGGGGACAAAGAATTGCTCAAATGGTAATCAATCAGATAGTAAGACCAACAATAGTAGAGGCAGAAATCCTTT CAGAAACAAAAAGAGATGAGGGAGGATTTGGCCATACCGGTATATAA
Upstream 100 bases:
>100_bases GACGAAATAAATGATTTAGCTAAAAAAATTATAAATCCTGCTGACATGAGCATAGCCGTGGTTGGAAAATTAAACAAAAG AGATAAAGGGTGGTTAGAAA
Downstream 100 bases:
>100_bases GGAGGGGTTCTATGCGGTTAAGCGAATTTGGAAATAAAGAAATTGTAAATTTAACGGATGGAAGAAGATGGGGATTAGTA GAAGATTCAGATTTAGTTAT
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSIILKIKKTDDAKDLPLPAYMSEGAAGMDLYANVKEEVILQPGEIKLIPTGIQIELPPNFEAQIRPRSGLALNYGITLL NTPGTIDSDYRGEIKLIVINLGKEAVKIARGQRIAQMVINQIVRPTIVEAEILSETKRDEGGFGHTGI
Sequences:
>Translated_148_residues MSIILKIKKTDDAKDLPLPAYMSEGAAGMDLYANVKEEVILQPGEIKLIPTGIQIELPPNFEAQIRPRSGLALNYGITLL NTPGTIDSDYRGEIKLIVINLGKEAVKIARGQRIAQMVINQIVRPTIVEAEILSETKRDEGGFGHTGI >Mature_147_residues SIILKIKKTDDAKDLPLPAYMSEGAAGMDLYANVKEEVILQPGEIKLIPTGIQIELPPNFEAQIRPRSGLALNYGITLLN TPGTIDSDYRGEIKLIVINLGKEAVKIARGQRIAQMVINQIVRPTIVEAEILSETKRDEGGFGHTGI
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family
Homologues:
Organism=Homo sapiens, GI70906444, Length=129, Percent_Identity=40.3100775193798, Blast_Score=97, Evalue=6e-21, Organism=Homo sapiens, GI4503423, Length=129, Percent_Identity=40.3100775193798, Blast_Score=97, Evalue=7e-21, Organism=Homo sapiens, GI70906441, Length=129, Percent_Identity=40.3100775193798, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI1790071, Length=146, Percent_Identity=42.4657534246575, Blast_Score=118, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71988561, Length=147, Percent_Identity=41.4965986394558, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6319729, Length=131, Percent_Identity=35.1145038167939, Blast_Score=79, Evalue=4e-16, Organism=Drosophila melanogaster, GI19921126, Length=130, Percent_Identity=32.3076923076923, Blast_Score=76, Evalue=7e-15, Organism=Drosophila melanogaster, GI24583610, Length=130, Percent_Identity=32.3076923076923, Blast_Score=76, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DUT_THEP3 (B0K9P1)
Other databases:
- EMBL: CP000924 - RefSeq: YP_001665190.1 - ProteinModelPortal: B0K9P1 - SMR: B0K9P1 - GeneID: 5875220 - GenomeReviews: CP000924_GR - KEGG: tpd:Teth39_1200 - HOGENOM: HBG436079 - OMA: HGIALVN - ProtClustDB: CLSK901205 - BioCyc: TPSE340099:TETH39_1200-MONOMER - HAMAP: MF_00116 - InterPro: IPR008180 - InterPro: IPR008181 - TIGRFAMs: TIGR00576
Pfam domain/function: PF00692 dUTPase
EC number: =3.6.1.23
Molecular weight: Translated: 16164; Mature: 16033
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: BINDING 81-81 BINDING 95-95
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIILKIKKTDDAKDLPLPAYMSEGAAGMDLYANVKEEVILQPGEIKLIPTGIQIELPPN CEEEEEEECCCCCCCCCCCHHHCCCCCCCEEEECCCHHEEECCCCEEEEECCEEEEECCC FEAQIRPRSGLALNYGITLLNTPGTIDSDYRGEIKLIVINLGKEAVKIARGQRIAQMVIN CCEEEECCCCEEEECCEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHCCHHHHHHHHH QIVRPTIVEAEILSETKRDEGGFGHTGI HHCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SIILKIKKTDDAKDLPLPAYMSEGAAGMDLYANVKEEVILQPGEIKLIPTGIQIELPPN EEEEEEECCCCCCCCCCCHHHCCCCCCCEEEECCCHHEEECCCCEEEEECCEEEEECCC FEAQIRPRSGLALNYGITLLNTPGTIDSDYRGEIKLIVINLGKEAVKIARGQRIAQMVIN CCEEEECCCCEEEECCEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHCCHHHHHHHHH QIVRPTIVEAEILSETKRDEGGFGHTGI HHCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA