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The map label for this gene is ymdB [H]

Identifier: 167040261

GI number: 167040261

Start: 1641232

End: 1642014

Strand: Reverse

Name: ymdB [H]

Synonym: Teth514_1624

Alternate gene names: 167040261

Gene position: 1642014-1641232 (Counterclockwise)

Preceding gene: 167040262

Following gene: 167040260

Centisome position: 66.82

GC content: 32.82

Gene sequence:

>783_bases
ATGAAGATACTTATCATCGGCGATATAGTTGGAAGACCAGGTAGAAACATATTAAAAGAGCACTTACAAGAATTAATATC
AGAATACAATATTGACATAGTTATAGCGAATGGAGAAAATGCTGCCGGAGGAAATGGACTGACTCGCAAAGTTGCTGATG
AACTTTTTGAAATGGGAATTTCTGCATTAACAATGGGAAATCACGTGTGGGATCAAAAAGAAATATTAAAATTTATTGAT
GAAGAAATGCGAATTGTAAGACCTGCCAATTATTTAGAGGAAACACCTGGCAGAGGATCTATAGCACTTAATTTTAAAAA
TACAAAAATTGGTATTATAAATTTGCAGGGAACTACCTTTATGCCTTGCAATAGAAATCCTTTCTTTGTCGCCTTAGAAG
AAATAGAAAAGTTAAAAAAAGAGACGAATATAATCCTCGTAGATTTTCATGCAGAAGCTACTTCTGAAAAAATAGCAATG
GGATATTTTTTAGACGGAAAAGTAAGTTGTGTTTTTGGCACTCATACTCATGTACAAACGGCAGATGAGAAAATATTACA
AAATGGGACAGCTTACATAACTGATGTTGGCATGACAGGTCCTAGTGATTCTATATTGGGAATAGATAAAGAATTAATAA
TTAAAAAATTTACATCTTCTGTACCTGTACGCTTTGAAGTTGCAAAAAAAGGTCCTGCCCAGATAAATGCCATTGTAATT
TCTGTAGATGAAATAACAGGAAAATGCTATAGCATAGAACGCATTAATAAAATTTATGCATAA

Upstream 100 bases:

>100_bases
ACGCTTTAAAAGTTTCATCATAAATTTTTATTAGCTATTGTTTTAATACATAGGTTTGTGTAATAATAAGTTTAAGAAAA
TTATTTTTTGGAGGTTAAGA

Downstream 100 bases:

>100_bases
AAAGGAGGATTTTTAAAACAAATGTAGAATATTAACAAGGAGAAAATCATTTGTCTTTAAGGGGGAAAAACAATGGAAGT
GTTAAAAGTTTCAGCAAAAT

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKILIIGDIVGRPGRNILKEHLQELISEYNIDIVIANGENAAGGNGLTRKVADELFEMGISALTMGNHVWDQKEILKFID
EEMRIVRPANYLEETPGRGSIALNFKNTKIGIINLQGTTFMPCNRNPFFVALEEIEKLKKETNIILVDFHAEATSEKIAM
GYFLDGKVSCVFGTHTHVQTADEKILQNGTAYITDVGMTGPSDSILGIDKELIIKKFTSSVPVRFEVAKKGPAQINAIVI
SVDEITGKCYSIERINKIYA

Sequences:

>Translated_260_residues
MKILIIGDIVGRPGRNILKEHLQELISEYNIDIVIANGENAAGGNGLTRKVADELFEMGISALTMGNHVWDQKEILKFID
EEMRIVRPANYLEETPGRGSIALNFKNTKIGIINLQGTTFMPCNRNPFFVALEEIEKLKKETNIILVDFHAEATSEKIAM
GYFLDGKVSCVFGTHTHVQTADEKILQNGTAYITDVGMTGPSDSILGIDKELIIKKFTSSVPVRFEVAKKGPAQINAIVI
SVDEITGKCYSIERINKIYA
>Mature_260_residues
MKILIIGDIVGRPGRNILKEHLQELISEYNIDIVIANGENAAGGNGLTRKVADELFEMGISALTMGNHVWDQKEILKFID
EEMRIVRPANYLEETPGRGSIALNFKNTKIGIINLQGTTFMPCNRNPFFVALEEIEKLKKETNIILVDFHAEATSEKIAM
GYFLDGKVSCVFGTHTHVQTADEKILQNGTAYITDVGMTGPSDSILGIDKELIIKKFTSSVPVRFEVAKKGPAQINAIVI
SVDEITGKCYSIERINKIYA

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28788; Mature: 28788

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILIIGDIVGRPGRNILKEHLQELISEYNIDIVIANGENAAGGNGLTRKVADELFEMGI
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCH
SALTMGNHVWDQKEILKFIDEEMRIVRPANYLEETPGRGSIALNFKNTKIGIINLQGTTF
HHEECCCCCCCHHHHHHHHHHHHHEECCCHHHHCCCCCCEEEEEEECCEEEEEEECCCEE
MPCNRNPFFVALEEIEKLKKETNIILVDFHAEATSEKIAMGYFLDGKVSCVFGTHTHVQT
ECCCCCCEEEEHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEEECCEEEEEEECCCCCHH
ADEKILQNGTAYITDVGMTGPSDSILGIDKELIIKKFTSSVPVRFEVAKKGPAQINAIVI
HHHHHHHCCCEEEEECCCCCCCCCEECCCHHHHHHHHHCCCCEEEEECCCCCCEEEEEEE
SVDEITGKCYSIERINKIYA
EEECCCCCEEEHHHHHHHCC
>Mature Secondary Structure
MKILIIGDIVGRPGRNILKEHLQELISEYNIDIVIANGENAAGGNGLTRKVADELFEMGI
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCH
SALTMGNHVWDQKEILKFIDEEMRIVRPANYLEETPGRGSIALNFKNTKIGIINLQGTTF
HHEECCCCCCCHHHHHHHHHHHHHEECCCHHHHCCCCCCEEEEEEECCEEEEEEECCCEE
MPCNRNPFFVALEEIEKLKKETNIILVDFHAEATSEKIAMGYFLDGKVSCVFGTHTHVQT
ECCCCCCEEEEHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEEECCEEEEEEECCCCCHH
ADEKILQNGTAYITDVGMTGPSDSILGIDKELIIKKFTSSVPVRFEVAKKGPAQINAIVI
HHHHHHHCCCEEEEECCCCCCCCCEECCCHHHHHHHHHCCCCEEEEECCCCCCEEEEEEE
SVDEITGKCYSIERINKIYA
EEECCCCCEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]