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The map label for this gene is ynbB [H]

Identifier: 167040255

GI number: 167040255

Start: 1635065

End: 1636339

Strand: Reverse

Name: ynbB [H]

Synonym: Teth514_1618

Alternate gene names: 167040255

Gene position: 1636339-1635065 (Counterclockwise)

Preceding gene: 167040256

Following gene: 167040222

Centisome position: 66.59

GC content: 34.98

Gene sequence:

>1275_bases
ATGGACACAAAAAAATTTTTGCAGAACAATTTCCATATAAACTCAAAAATAATCGAAGTTATAGAAAAAGCAGAAAAAGA
TTGTCATCCTGTATTTAGAAAGATTGATAAGACTGTAGAGTACAATCAGTATAAGGTCATATATCATTTCCAAAAGAACA
AATTAAGCGATATCCATTTTAATGGCACAACTGGCTATGGATATGGTGACATCGGGCGAGAGACAATCGAAAAGATATAT
GCAGGAATATTTGCCGCAGAAGACGCTTTAGTAAGGCCTCAAATCGTTTCTGGAACTCATGCTATAGCATTATGTCTATT
TGGCAATTTAAAACCAAATGAAGAGCTAATTTCAGCTTGTGGGAGGCCTTATGATACGTTAGAAGAAATAATAGGGATAA
AAGGGGAGGGGAGGGGAAGTTTAAAAGAATACGGAGTTATATATAAAGAAATTCCCCTCCTTAATGATGGAAAAATAGAT
ATAGAAAGTGTAAAAAAAGCAATAACCTCAAAAACTAAAATGGTGATGATTCAACGATCAAAAGGGTATGACTATAGAAA
GTCTTTGAAGATAGAAGATATAGAAAAGGCAATTAGTGAAATTAAAAAGGTAAAAGAAGATGTAATCATATTTGTAGATA
ATTGCTATGGAGAATTTACTGAGATAAAAGAACCAACAGAAGTAGGAGCCGACATTATAGCAGGTTCTCTTATAAAGAAC
ATAGGTGGGGGAATTGCCCCTACAGGTGGATATGTAGTAGGAAAAAAGGAATTAGTTGAAAATGCTTCTTATAGGCTATA
TGCCCCTGGCATAGGAAAAGAGGTAGGTCCTTCTTTAGATTTAAATAGATTGATTTTACAAGGGTTATTTTTTGCACCTC
AAGTGGTAGGACAAGCTTTAAAAGGAGCTGTTCTTTTAGCGAAAATTATGTCAGACTTAGGCTATGAAGTTACTCCAAAA
TATGACGAAGAAAGAACTGACATAGTTCAAGCTATCAAATTTAAAACTGCTGAAGAGTTGATATCTTTTATCCAGGGAAT
ACAAATGGGGTCCCCAGTAGACTCTCATGTAATTCCTGAGCCGTGGGACATGCCAGGATATCAGGATAAAGTCATAATGG
CAGCAGGAGGATTTATACAAGGATCTTCTATAGAGTTAAGTGCAGATGCCCCTATAAGAGAACCTTATATCGCATACGTG
CAAGGTGGTCTTACTTATCCTCAAGTAAAATTGGCAATGGCTATTGCTTTAAATAATATTTACAAAGAAGAATAA

Upstream 100 bases:

>100_bases
GCAATTAGAAAACAGGCTGTAAGAGTTTTAAACAAAATAAATATAACCAAAGAAGATTTAATAACAATAGACAGTATAGA
CATTAGAGAGGACTGAGAAA

Downstream 100 bases:

>100_bases
GCTACGAAATAAAATTCAAGAGGAAAGATTTTCCTCTTGAATTTTATTTTCAATCTTCCTTTTGTGATAAAGGGTTTTTA
TTTACAGCTTCTTTTAATTG

Product: aluminium resistance family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MDTKKFLQNNFHINSKIIEVIEKAEKDCHPVFRKIDKTVEYNQYKVIYHFQKNKLSDIHFNGTTGYGYGDIGRETIEKIY
AGIFAAEDALVRPQIVSGTHAIALCLFGNLKPNEELISACGRPYDTLEEIIGIKGEGRGSLKEYGVIYKEIPLLNDGKID
IESVKKAITSKTKMVMIQRSKGYDYRKSLKIEDIEKAISEIKKVKEDVIIFVDNCYGEFTEIKEPTEVGADIIAGSLIKN
IGGGIAPTGGYVVGKKELVENASYRLYAPGIGKEVGPSLDLNRLILQGLFFAPQVVGQALKGAVLLAKIMSDLGYEVTPK
YDEERTDIVQAIKFKTAEELISFIQGIQMGSPVDSHVIPEPWDMPGYQDKVIMAAGGFIQGSSIELSADAPIREPYIAYV
QGGLTYPQVKLAMAIALNNIYKEE

Sequences:

>Translated_424_residues
MDTKKFLQNNFHINSKIIEVIEKAEKDCHPVFRKIDKTVEYNQYKVIYHFQKNKLSDIHFNGTTGYGYGDIGRETIEKIY
AGIFAAEDALVRPQIVSGTHAIALCLFGNLKPNEELISACGRPYDTLEEIIGIKGEGRGSLKEYGVIYKEIPLLNDGKID
IESVKKAITSKTKMVMIQRSKGYDYRKSLKIEDIEKAISEIKKVKEDVIIFVDNCYGEFTEIKEPTEVGADIIAGSLIKN
IGGGIAPTGGYVVGKKELVENASYRLYAPGIGKEVGPSLDLNRLILQGLFFAPQVVGQALKGAVLLAKIMSDLGYEVTPK
YDEERTDIVQAIKFKTAEELISFIQGIQMGSPVDSHVIPEPWDMPGYQDKVIMAAGGFIQGSSIELSADAPIREPYIAYV
QGGLTYPQVKLAMAIALNNIYKEE
>Mature_424_residues
MDTKKFLQNNFHINSKIIEVIEKAEKDCHPVFRKIDKTVEYNQYKVIYHFQKNKLSDIHFNGTTGYGYGDIGRETIEKIY
AGIFAAEDALVRPQIVSGTHAIALCLFGNLKPNEELISACGRPYDTLEEIIGIKGEGRGSLKEYGVIYKEIPLLNDGKID
IESVKKAITSKTKMVMIQRSKGYDYRKSLKIEDIEKAISEIKKVKEDVIIFVDNCYGEFTEIKEPTEVGADIIAGSLIKN
IGGGIAPTGGYVVGKKELVENASYRLYAPGIGKEVGPSLDLNRLILQGLFFAPQVVGQALKGAVLLAKIMSDLGYEVTPK
YDEERTDIVQAIKFKTAEELISFIQGIQMGSPVDSHVIPEPWDMPGYQDKVIMAAGGFIQGSSIELSADAPIREPYIAYV
QGGLTYPQVKLAMAIALNNIYKEE

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 46979; Mature: 46979

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKKFLQNNFHINSKIIEVIEKAEKDCHPVFRKIDKTVEYNQYKVIYHFQKNKLSDIHF
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEE
NGTTGYGYGDIGRETIEKIYAGIFAAEDALVRPQIVSGTHAIALCLFGNLKPNEELISAC
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHC
GRPYDTLEEIIGIKGEGRGSLKEYGVIYKEIPLLNDGKIDIESVKKAITSKTKMVMIQRS
CCCHHHHHHHHCCCCCCCCCHHHHCHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECC
KGYDYRKSLKIEDIEKAISEIKKVKEDVIIFVDNCYGEFTEIKEPTEVGADIIAGSLIKN
CCCCHHHCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHH
IGGGIAPTGGYVVGKKELVENASYRLYAPGIGKEVGPSLDLNRLILQGLFFAPQVVGQAL
HCCCCCCCCCEEECHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KGAVLLAKIMSDLGYEVTPKYDEERTDIVQAIKFKTAEELISFIQGIQMGSPVDSHVIPE
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PWDMPGYQDKVIMAAGGFIQGSSIELSADAPIREPYIAYVQGGLTYPQVKLAMAIALNNI
CCCCCCCCCCEEEEECCEEECCCEEEECCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHH
YKEE
HCCC
>Mature Secondary Structure
MDTKKFLQNNFHINSKIIEVIEKAEKDCHPVFRKIDKTVEYNQYKVIYHFQKNKLSDIHF
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEE
NGTTGYGYGDIGRETIEKIYAGIFAAEDALVRPQIVSGTHAIALCLFGNLKPNEELISAC
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHC
GRPYDTLEEIIGIKGEGRGSLKEYGVIYKEIPLLNDGKIDIESVKKAITSKTKMVMIQRS
CCCHHHHHHHHCCCCCCCCCHHHHCHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECC
KGYDYRKSLKIEDIEKAISEIKKVKEDVIIFVDNCYGEFTEIKEPTEVGADIIAGSLIKN
CCCCHHHCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHH
IGGGIAPTGGYVVGKKELVENASYRLYAPGIGKEVGPSLDLNRLILQGLFFAPQVVGQAL
HCCCCCCCCCEEECHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KGAVLLAKIMSDLGYEVTPKYDEERTDIVQAIKFKTAEELISFIQGIQMGSPVDSHVIPE
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PWDMPGYQDKVIMAAGGFIQGSSIELSADAPIREPYIAYVQGGLTYPQVKLAMAIALNNI
CCCCCCCCCCEEEEECCEEECCCEEEECCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHH
YKEE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]