| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
Click here to switch to the map view.
The map label for this gene is ytfP [H]
Identifier: 167040239
GI number: 167040239
Start: 1618576
End: 1619796
Strand: Direct
Name: ytfP [H]
Synonym: Teth514_1601
Alternate gene names: 167040239
Gene position: 1618576-1619796 (Clockwise)
Preceding gene: 167040238
Following gene: 167040240
Centisome position: 65.87
GC content: 32.6
Gene sequence:
>1221_bases ATGAAAAAAGTATTTGTAGTAGGCGGCGGCCCAGCAGGAATGATGGCAGCTTTATCAGCAGCTATGATGGGAAAAGAAGT AAGTATATATGAGAGGAATAACATTTTAGGTAAAAAATTATTAGTTACAGGTAATGGAAGGTGTAATATTACTAATTTTG CTGACAAAGAAGAATTTTTCGAGAATATTCCAGGAAATAGTAAATTTTTATATAGCGCTTTTAGCAAGTTTTCTAATAAG GATTTAATAGAGTTTTTAAATAAAAATGGGCTTAAAATTAAAATAGAAAGAGGTTTAAGGGTTTTTCCGGTTTCAGATAA ATCAATAGAAGTGAGAGATTTTTTTGTGAATATGCTTAAAAAATATGGAGTAAAGATAAATTATAACTGCAGAGTAAGTG ATGTGATAGTGGAAAATAAACACGTAAAGGGCATAAGTGTTGATGAGAGTGTTTTAAACTGCGATAGTGTAATATTAGCA ACAGGAGGAGTGTCATATCCTACGACTGGCTCTACTGGTGATGGGTATGAAATTGCTAAGAAATTGGGGCACACAATTAT AGAGCCATTTCCTTCCTTAGTGCCGATTGTTACATATGAAAATGTAAGAGAATTGATGGGACTCACTCTTAAAAATGTCA AAGTTTCTGCTTTTTTTGGAGAGAAATTAATAAGAGAAGAGTTTGGAGAAATGCTTTTTACCCATTTTGGGTTGTCAGGC CCTGCAATACTCACCTTAAGCAGGTTTTTACATGATTACTTAGGTAAGGGAGAAGTAGTAATAAAAGTTGACTTAAAGCC GGGACTTAATATTGAAAAGCTGGAGGAAAGAGTATTAAGAGATTTTAATAAGTACCAAAATAAAAATCTGAAAAATGCCT TGGAAGATTTATTGCCTCATTCATTAATCCTATATGTTATAAAAAGGGCGAATATAGACCCTGATAAAAAAGTTAGGGAA ATAACCAAAAATGAAAGAAAAAAATTGGTCAATAGCTTAAAAAATCTTACTTTTAAGGTAAAAGACCTAAGGCCTATAAG AGAAGCTATTGTTACAGGTGGTGGAGTAAGTATAAAAGAAATAAATCCCTCTACAATGGAGTCTAAAATAATAAAAGGCT TATTTTTTGCAGGTGAAATTATAGATGTGGATGGATTTACCGGTGGATTCAACTTGCAAATTGCCTTTTCTACAGGCTAT GTGGCAGGAATTAATGCATAA
Upstream 100 bases:
>100_bases ATAATACTTCTCTTAATATAGTAGATGTTAAGGAAGATGGTAAAACTGTTCTGGTGCTATTTAACGATACTTGTCATTTA AGGAGAGATGAAAAAATAAT
Downstream 100 bases:
>100_bases GTAAAATGCGGTTTTCCGCATTTTTTTATTTGCTTTGCATAAGATATAATAAAGAAAAGGAGGATAAACATGGGAAAAAG AGTCAAAAGGAAAAAATACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MKKVFVVGGGPAGMMAALSAAMMGKEVSIYERNNILGKKLLVTGNGRCNITNFADKEEFFENIPGNSKFLYSAFSKFSNK DLIEFLNKNGLKIKIERGLRVFPVSDKSIEVRDFFVNMLKKYGVKINYNCRVSDVIVENKHVKGISVDESVLNCDSVILA TGGVSYPTTGSTGDGYEIAKKLGHTIIEPFPSLVPIVTYENVRELMGLTLKNVKVSAFFGEKLIREEFGEMLFTHFGLSG PAILTLSRFLHDYLGKGEVVIKVDLKPGLNIEKLEERVLRDFNKYQNKNLKNALEDLLPHSLILYVIKRANIDPDKKVRE ITKNERKKLVNSLKNLTFKVKDLRPIREAIVTGGGVSIKEINPSTMESKIIKGLFFAGEIIDVDGFTGGFNLQIAFSTGY VAGINA
Sequences:
>Translated_406_residues MKKVFVVGGGPAGMMAALSAAMMGKEVSIYERNNILGKKLLVTGNGRCNITNFADKEEFFENIPGNSKFLYSAFSKFSNK DLIEFLNKNGLKIKIERGLRVFPVSDKSIEVRDFFVNMLKKYGVKINYNCRVSDVIVENKHVKGISVDESVLNCDSVILA TGGVSYPTTGSTGDGYEIAKKLGHTIIEPFPSLVPIVTYENVRELMGLTLKNVKVSAFFGEKLIREEFGEMLFTHFGLSG PAILTLSRFLHDYLGKGEVVIKVDLKPGLNIEKLEERVLRDFNKYQNKNLKNALEDLLPHSLILYVIKRANIDPDKKVRE ITKNERKKLVNSLKNLTFKVKDLRPIREAIVTGGGVSIKEINPSTMESKIIKGLFFAGEIIDVDGFTGGFNLQIAFSTGY VAGINA >Mature_406_residues MKKVFVVGGGPAGMMAALSAAMMGKEVSIYERNNILGKKLLVTGNGRCNITNFADKEEFFENIPGNSKFLYSAFSKFSNK DLIEFLNKNGLKIKIERGLRVFPVSDKSIEVRDFFVNMLKKYGVKINYNCRVSDVIVENKHVKGISVDESVLNCDSVILA TGGVSYPTTGSTGDGYEIAKKLGHTIIEPFPSLVPIVTYENVRELMGLTLKNVKVSAFFGEKLIREEFGEMLFTHFGLSG PAILTLSRFLHDYLGKGEVVIKVDLKPGLNIEKLEERVLRDFNKYQNKNLKNALEDLLPHSLILYVIKRANIDPDKKVRE ITKNERKKLVNSLKNLTFKVKDLRPIREAIVTGGGVSIKEINPSTMESKIIKGLFFAGEIIDVDGFTGGFNLQIAFSTGY VAGINA
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI2367234, Length=398, Percent_Identity=30.1507537688442, Blast_Score=178, Evalue=7e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 45122; Mature: 45122
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVFVVGGGPAGMMAALSAAMMGKEVSIYERNNILGKKLLVTGNGRCNITNFADKEEFF CCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCEEEECCCCCHHHHH ENIPGNSKFLYSAFSKFSNKDLIEFLNKNGLKIKIERGLRVFPVSDKSIEVRDFFVNMLK HHCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHH KYGVKINYNCRVSDVIVENKHVKGISVDESVLNCDSVILATGGVSYPTTGSTGDGYEIAK HCCCEEEECCEEEEEEEECCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHH KLGHTIIEPFPSLVPIVTYENVRELMGLTLKNVKVSAFFGEKLIREEFGEMLFTHFGLSG HHCHHHHCCCCCCCCEEEHHHHHHHHCCHHHCEEEEHHHHHHHHHHHHHHHHHHHCCCCC PAILTLSRFLHDYLGKGEVVIKVDLKPGLNIEKLEERVLRDFNKYQNKNLKNALEDLLPH HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH SLILYVIKRANIDPDKKVREITKNERKKLVNSLKNLTFKVKDLRPIREAIVTGGGVSIKE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHCCCCEEEEE INPSTMESKIIKGLFFAGEIIDVDGFTGGFNLQIAFSTGYVAGINA CCCHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEECCEEEECCC >Mature Secondary Structure MKKVFVVGGGPAGMMAALSAAMMGKEVSIYERNNILGKKLLVTGNGRCNITNFADKEEFF CCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCEEEECCCCCHHHHH ENIPGNSKFLYSAFSKFSNKDLIEFLNKNGLKIKIERGLRVFPVSDKSIEVRDFFVNMLK HHCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHH KYGVKINYNCRVSDVIVENKHVKGISVDESVLNCDSVILATGGVSYPTTGSTGDGYEIAK HCCCEEEECCEEEEEEEECCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHH KLGHTIIEPFPSLVPIVTYENVRELMGLTLKNVKVSAFFGEKLIREEFGEMLFTHFGLSG HHCHHHHCCCCCCCCEEEHHHHHHHHCCHHHCEEEEHHHHHHHHHHHHHHHHHHHCCCCC PAILTLSRFLHDYLGKGEVVIKVDLKPGLNIEKLEERVLRDFNKYQNKNLKNALEDLLPH HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH SLILYVIKRANIDPDKKVREITKNERKKLVNSLKNLTFKVKDLRPIREAIVTGGGVSIKE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHCCCCEEEEE INPSTMESKIIKGLFFAGEIIDVDGFTGGFNLQIAFSTGYVAGINA CCCHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEECCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]