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The map label for this gene is sdhB [H]

Identifier: 167040060

GI number: 167040060

Start: 1454572

End: 1455240

Strand: Direct

Name: sdhB [H]

Synonym: Teth514_1420

Alternate gene names: 167040060

Gene position: 1454572-1455240 (Clockwise)

Preceding gene: 167040059

Following gene: 167040061

Centisome position: 59.19

GC content: 36.02

Gene sequence:

>669_bases
ATGAGAGAATACAGTGTATTTGATATTATGGGGCCTGTGATGATTGGGCCCAGCAGTTCTCATACAGCAGGGGCCGCAAG
GCTTGCGAAAATTGCTCGTGAAATTGTGGAAGAGGATATATCAGAAGTGGAATTTGTATTGTATGAATCTTTTGCCCGTA
CATATAGGGGACATGGTACGGATAAGGCTCTTGTGGCAGGGATATTAGGTTTTGACCCAGATGATGAGAAACTGTCTCAT
TCTTTTGAAATAGCAAGACAGCAAGGGATAAAGTTTAAATTTACTGAAAGTGACGAAGAATCACCACATCCCAATACTGT
AAAAATGATAATAACAGGTAAAAGTGGACAGAAAAACAGCATTTTAGGATGTTCTATTGGTGGAGGAAATGTGCTTTTAA
AAGAGATAAATGGCATAGAGGTAGAGTTTACTGGTGAATATGAAACGTTGATTACAAATCACATAGATAGACCAGGGATA
GTGGCAAATGTCACTAAAATTTTTGCAGATTATAAAATAAATATAGCTTTTATGAGAGTGTACAGGCATTCAAAAGGTGA
CAAAGCTATTATGGTCATAGAATCAGACCAAAAAATACCTGATGCTGCAAAAGAAACCATAAAAAACATTGATGGAATTT
TAAATGCCATAATAATAAATCCTATGTAA

Upstream 100 bases:

>100_bases
AAAGCAATAAGTCAGATTTACTGGCTTATTGCTCTATTGCATTTTTATAGGGCGAAGGGTACAATATAGCTAAGAAAACT
TTTACGTAAGGAGATTTTGT

Downstream 100 bases:

>100_bases
TGGAGCCATGAGATGCTCTTGTTGTGATGAGAAAATTAAAGAAAAACTAAGATATTAAGAGAAAATAAAAGATAATAGTG
GGAGGTATAAAATGTATCAA

Product: L-serine dehydratase, iron-sulfur-dependent subunit beta

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MREYSVFDIMGPVMIGPSSSHTAGAARLAKIAREIVEEDISEVEFVLYESFARTYRGHGTDKALVAGILGFDPDDEKLSH
SFEIARQQGIKFKFTESDEESPHPNTVKMIITGKSGQKNSILGCSIGGGNVLLKEINGIEVEFTGEYETLITNHIDRPGI
VANVTKIFADYKINIAFMRVYRHSKGDKAIMVIESDQKIPDAAKETIKNIDGILNAIIINPM

Sequences:

>Translated_222_residues
MREYSVFDIMGPVMIGPSSSHTAGAARLAKIAREIVEEDISEVEFVLYESFARTYRGHGTDKALVAGILGFDPDDEKLSH
SFEIARQQGIKFKFTESDEESPHPNTVKMIITGKSGQKNSILGCSIGGGNVLLKEINGIEVEFTGEYETLITNHIDRPGI
VANVTKIFADYKINIAFMRVYRHSKGDKAIMVIESDQKIPDAAKETIKNIDGILNAIIINPM
>Mature_222_residues
MREYSVFDIMGPVMIGPSSSHTAGAARLAKIAREIVEEDISEVEFVLYESFARTYRGHGTDKALVAGILGFDPDDEKLSH
SFEIARQQGIKFKFTESDEESPHPNTVKMIITGKSGQKNSILGCSIGGGNVLLKEINGIEVEFTGEYETLITNHIDRPGI
VANVTKIFADYKINIAFMRVYRHSKGDKAIMVIESDQKIPDAAKETIKNIDGILNAIIINPM

Specific function: Deaminates Also Threonine, Particularly When It Is Present In High Concentration. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004643
- InterPro:   IPR005131 [H]

Pfam domain/function: PF03315 SDH_beta [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 24491; Mature: 24491

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREYSVFDIMGPVMIGPSSSHTAGAARLAKIAREIVEEDISEVEFVLYESFARTYRGHGT
CCCCCHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKALVAGILGFDPDDEKLSHSFEIARQQGIKFKFTESDEESPHPNTVKMIITGKSGQKNS
CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCC
ILGCSIGGGNVLLKEINGIEVEFTGEYETLITNHIDRPGIVANVTKIFADYKINIAFMRV
EEEEECCCCCEEEEECCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEEEEE
YRHSKGDKAIMVIESDQKIPDAAKETIKNIDGILNAIIINPM
ECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MREYSVFDIMGPVMIGPSSSHTAGAARLAKIAREIVEEDISEVEFVLYESFARTYRGHGT
CCCCCHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKALVAGILGFDPDDEKLSHSFEIARQQGIKFKFTESDEESPHPNTVKMIITGKSGQKNS
CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCC
ILGCSIGGGNVLLKEINGIEVEFTGEYETLITNHIDRPGIVANVTKIFADYKINIAFMRV
EEEEECCCCCEEEEECCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEEEEE
YRHSKGDKAIMVIESDQKIPDAAKETIKNIDGILNAIIINPM
ECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9244285; 2065681 [H]